Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_003391.1
Length=205719
Score E
Sequences producing significant alignments: (Bits) Value
seq310 518 4e-142
seq12 342 7e-89
>seq310
Length=366558
Score = 518 bits (574), Expect = 4e-142
Identities = 1237/1857 (67%), Gaps = 31/1857 (2%)
Strand=Plus/Plus
Query 64860 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 64919
|| ||||| || | || ||| ||||| || ||||| | || ||||||| ||||||
Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598
Query 64920 TGCATACTCGTTAGT--TTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGAC 64977
|| || || | | ||| ||| | || | | | ||||| ||||| | ||| || |
Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656
Query 64978 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTT 65037
| || || || |||||||| | ||||| ||||| |||| || || |||| |||||
Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716
Query 65038 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 65094
|||| | ||||||||| | || ||||| || |||| || |||| ||||| |
Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776
Query 65095 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTA 65154
| |||| || || | || | || || ||| | |||| ||| | | | ||| || |
Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCA 100836
Query 65155 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 65214
|| ||||||| | ||| | || || || |||||||||||| || || | | || |
Sbjct 100837 AATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTAT 100896
Query 65215 AAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 65274
| | ||| || || ||||| ||||| |||||||| ||||||||||| || ||||| |
Sbjct 100897 ATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAG 100956
Query 65275 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTT 65334
| || ||||| || || | | ||| |||||||| |||||| | ||||| |||
Sbjct 100957 CGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGCTT 101016
Query 65335 TTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAA 65394
| | || |||||| ||| | || | || |||| ||
Sbjct 101017 TCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAAA 101076
Query 65395 TACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGT 65453
| || || || | | || | ||| |||| || || || || || ||||| || | |
Sbjct 101077 TCCCCTTGCTTACAGGACTA-CCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATT 101135
Query 65454 TCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCT 65513
||||| || || || | |||||||||||| | |||||||| || | | ||| || |
Sbjct 101136 TCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTTC 101195
Query 65514 TGTGCTTCCAGGCTATCAAATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTG 65572
||||| |||| ||| | | || ||| | |||||| || || ||||| |||||
Sbjct 101196 GCAGCTTCAGGGCTGTCATAAGC-TATACGAAGTAAAATAAAAGCATCGGCTAAACCTTG 101254
Query 65573 AACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATA 65632
||||| || || || ||||| || ||| ||| ||| ||| || ||||| | |||||
Sbjct 101255 TACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGATA 101314
Query 65633 ATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAG 65692
|||||||| || |||||||| || || ||| | || |||||| | || || |
Sbjct 101315 ATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTAA 101374
Query 65693 TTTGAGAAAATCAAATCGCTCATCTAT-------TACAAACATGTTCAATGCAACAGATG 65745
|| |||||| | | | ||||| ||||||||| |||| ||||| ||||
Sbjct 101375 CTTCTTAAAATCGTAG-GATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGATG 101433
Query 65746 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 65805
||| |||||| || || || || | || | ||||| | || || ||||| | ||
Sbjct 101434 CCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAAT 101493
Query 65806 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 65865
| || | | || |||||||| ||||||||||| || ||| |||| || ||||| ||||
Sbjct 101494 TGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTAT 101553
Query 65866 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 65925
| || ||||| ||||| |||||||| | ||||| | || || || | ||| |
Sbjct 101554 ATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATTTCT 101613
Query 65926 GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGA 65985
|||| || | ||| ||||| | |||| ||| || | |||||| |||| |
Sbjct 101614 GAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTTCAA 101673
Query 65986 ACTCGTCTCCCCAAACATTGTCCAATCCAGGACATTCATCCGGACACATCAACGACCACT 66045
||| ||||||||| || || | ||| ||||||| || |||||||||| ||||| |
Sbjct 101674 ACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACCAGT 101733
Query 66046 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAAAT 66105
|| | | | |||| ||||||||| | ||| || ||||| || || ||| ||||
Sbjct 101734 GCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAAAT 101793
Query 66106 CTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 66165
|||| | ||| || || ||||||||||| ||||| | || | || | | || |
Sbjct 101794 CTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATATGT 101853
Query 66166 CATAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGAT 66225
| |||||| ||||| | || || || | | | ||||| | ||||| ||||| ||||
Sbjct 101854 CTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTGAT 101913
Query 66226 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTAC 66285
||| ||||| || |||||| |||| | | ||| |||| | ||| || || || |
Sbjct 101914 CTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGTGC 101973
Query 66286 CATTGGTCCCGGAGATATAGCTTCCACTTGCACGAATATTACTAATTGATAGACCTATTC 66345
| ||||| || | || | || || | ||||| ||||| | || || | |
Sbjct 101974 CGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCAAAC 102033
Query 66346 CCCCTGCCATTTTAGAGATTAATGCGCATCGT--TTTAACGTATCATAGATGCCCTCTAT 66403
| |||||| |||||| || | || | | || | ||| | | | | ||||| || ||
Sbjct 102034 CACCTGCCGATTTAGAAATGAGAGCAC-TTGTAGTCAAACAT-TTACAAATGCCTTCAAT 102091
Query 66404 ACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT--TCC 66460
|||||||| || || || || ||||| || | | ||| | || || |||
Sbjct 102092 GCTATCATCAGGCATTGCTACCAAG-AAACACGATGAAA---GCTGAGGTCTTGTGGTCC 102147
Query 66461 C-GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATTGTACG 66519
| || || | |||||| || || || || || || || | || ||||||||
Sbjct 102148 CAGCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACG 102207
Query 66520 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 66579
| || || || | |||||||| | ||||| || || || || ||||| | |||||
Sbjct 102208 TTTCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGT 102267
Query 66580 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 66639
| ||||||||||| ||||| || ||| | |||||| | || || ||| |||||||
Sbjct 102268 GTTGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTT 102327
Query 66640 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 66696
||||||||||||| ||||| ||||| || || || || | ||||| || || ||||
Sbjct 102328 TAAAACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384
>seq12
Length=2314596
Score = 342 bits (378), Expect = 7e-89
Identities = 632/921 (69%), Gaps = 17/921 (2%)
Strand=Plus/Minus
Query 35858 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAAT 35917
||||| || ||||| |||||||| || ||||| || ||||| || || || ||
Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037
Query 35918 GATATATTTTCCATGAAATCGAATGGATTGATAACATTATAAAtttttttAAATCCCAAT 35977
|| || || | ||| || || || ||||| ||||||||||||| || | | | |||||
Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977
Query 35978 TCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 36037
|| | | | || || |||||||| ||||| ||||| || ||||||||
Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917
Query 36038 CCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCT 36097
|| || || | || || | ||| |||| | |||||| |||||||| || || ||
Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857
Query 36098 GTTATAATAGATATTACTGTTTCTTCACTCGGTGGAT-----ACAATAAATGTTTAAACA 36152
|| ||| | ||||| |||| | | ||| | |||||| | | |||||
Sbjct 281856 CGAATTATATCTGTTACTCGCTCTT---TTGATGGTTTTTGAACAATATAAGA--AAACA 281802
Query 36153 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 36212
| ||||| || ||||| || || | ||| || || | | ||| | || || ||||| |
Sbjct 281801 TTAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATG 281742
Query 36213 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 36272
| ||||| ||||| || || || || || |||||||| || | ||||| ||| ||||
Sbjct 281741 TCAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAA 281682
Query 36273 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCA- 36331
||||||||||||| || || ||||| |||| || || ||| | ||| | | |
Sbjct 281681 AGAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTAC 281622
Query 36332 TGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 36389
|| ||||| | |||||||||| |||||||| || ||||||||||| || || ||||
Sbjct 281621 TGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAG 281562
Query 36390 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAT--GTATCAATCAAAAGACT 36447
|||| || ||| | | ||| || | || | || |||| || ||||| | | |||
Sbjct 281561 CATTGAAAAGAAATTCTTTCTCTT--CTGGGTCAAATATATAAGTGTCAATGAGAGTACT 281504
Query 36448 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGCCTC 36507
||||||||| ||||| || ||||||||||| ||||| || || || || || | ||||||
Sbjct 281503 ATACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTC 281444
Query 36508 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 36567
|| | ||||||||| || |||| ||| | | |||||||| || ||||| |||
Sbjct 281443 AGTTACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGA 281384
Query 36568 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTTTGGTGTTAGTTTATT 36627
|| |||||||| || | ||||||| || |||| |||| | || | ||||
Sbjct 281383 TGCAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATC 281324
Query 36628 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 36687
||| | | || ||||| | || |||||||| |||||| || || || || ||
Sbjct 281323 CCAGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGC 281264
Query 36688 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTTG 36747
| || ||| | | ||| ||||| |||||||||| ||||| || || || || || |
Sbjct 281263 TTCCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGG 281204
Query 36748 ATTTTTTGCAAGGATTGGTTC 36768
||||| | ||| | ||||||
Sbjct 281203 ATTTTCTCTAAGCAATGGTTC 281183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658139990085920
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