Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_003529.1
Length=155060
Score E
Sequences producing significant alignments: (Bits) Value
seq310 138 1e-27
seq218 104 2e-17
seq44 96.9 3e-15
seq25 93.3 4e-14
seq428 89.7 5e-13
>seq310
Length=366558
Score = 138 bits (152), Expect = 1e-27
Identities = 596/933 (64%), Gaps = 21/933 (2%)
Strand=Plus/Plus
Query 153269 ATTCCACAAATCGTATTGCAATATCCCTTGGCTAGCTTTGCTACCGGCAAACGTGCTATA 153328
|||||||| ||| || || || ||||| | ||| | ||||| || | ||| |||
Sbjct 101054 ATTCCACATATCATACTGTAAAATCCCCTTGCTTACAGGACTACCTTCATAAGTGGAATA 101113
Query 153329 CGGCTCA-CTGTCAGACGCCAGTTTCAAA-CTGGCATCGAGCGCGGCATGATACACAGTT 153386
|| || || || || | ||||| | || || || || || | | ||||| ||||
Sbjct 101114 AGGACCATCTTTCTCT-GCGA-TTTCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTT 101171
Query 153387 TCGGAAATCTGTTTGTTCAGTAAAACGGCAGCATCGCTCACGTACGGTATGCGCAACATG 153446
||| |||| |||| || ||| | || || ||| | || | ||| || | |
Sbjct 101172 TCGAAAATTTGTTGATTAAGTTTCGCAGCTTCAGGGCTGTCATAAGCTATACGAAGTAAA 101231
Query 153447 ACAAATGCATCGGCCAAACCTTGAATGCCAATGCCTATGGGACGATGGCGCATATTAGAt 153506
| ||| |||||||| |||||||| | || || || || || | || | || ||| ||
Sbjct 101232 ATAAAAGCATCGGCTAAACCTTGTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAG 101291
Query 153507 ttttttGCAGCTTCAACAGGATAGAAATTGCGGTCGATAATTTTATTTAAACTAATCACG 153566
|||| || || || ||||| |||| |||||||||||| |||| | ||
Sbjct 101292 GTTTTGGCCTCTGGTACGGGATAATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTA 101351
Query 153567 ACATGTTTCACCACAGAATGCAACAGTTGAAAATCAAACG---TTCCATTAA---TGATA 153620
||| ||| | | ||| | |||||| | | ||| || | | |
Sbjct 101352 ACAACTTTGGTGATTTCTTTTAACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACA 101411
Query 153621 TATTTGTTGACGGCAATCGACGCCAAGTTGCAAACGGCAGTTTCGTCGGGGGCGCAATAT 153680
| | || || |||| ||| ||||| || || || ||| |||||| |||| ||||
Sbjct 101412 AACATATTCACTGCAAGCGATGCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATAT 101471
Query 153681 TGTACTATTTCCGCACACAAATTGCTGCATTTTATCAGGCCGCAATTACTTTGATTGCTT 153740
| || ||||| | || |||||||||| | | || || | || ||||||||||
Sbjct 101472 TCAACAATTTCTGTGCATAAATTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTT 101531
Query 153741 TTGCGGTTACAAGCGTCCTTGTATAGCATGTATGGTGTGCCGGTTTCGGCTTGAATTTCT 153800
|| | ||| || || || || ||||||||| | || || || |||||| ||||| |
Sbjct 101532 TTTCTGTTGCATGCATCTTTATATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACA 101591
Query 153801 ATAATAGTACGCATCAATGTGACCGCGGGCATTTGATCGCGAAA---CTGGCCCTTGT-C 153856
|| |||| | || |||| | || || | |||| |||| | |||| | |
Sbjct 101592 ATTATAGCATGCCACAATTTCTGAGCAGGTACTTGA----GAAATGTATTTACCTTCTGC 101647
Query 153857 TTCGTAGTGTTTGTACCAGTATTCAAACTCATCACCAAACGTATTGTTAAGCTCGGGACA 153916
||| || | || ||| | | |||||||| || || | ||| || ||| |||||||
Sbjct 101648 TTCATACTTTTCATACAACTGTTCAAACTTTTCTCCCCAATTATCGTAAAGTCCGGGACA 101707
Query 153917 TTCGTTGGGACACATCAGTGACCATCGGCCATTTTCTTGAACGCGACGCATAAATATATC 153976
|| | ||||||||||||||||| | ||||||| || ||| | |||||| | |||
Sbjct 101708 TTGATGAGGACACATCAGTGACCAGTGCCCATTTTGTTCAACTCTTTTCATAAACAAATC 101767
Query 153977 GGGAACCCATAGGGCGTTCATCAGGTCGCGCGCTTTCGTGTCTTCGCTGCCAATGTTTCG 154036
|| | ||||||||| | | || || | ||| || | ||||| | || | |||
Sbjct 101768 TGGTATCCATAGGGCATAAAACAAATCTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTT 101827
Query 154037 ACGCATGTGTAAGACGTCCATTATGTCGCAATGCCACGGTTCCACGTAAACTGCTTGAGC 154096
|| | ||| | || | |||||| |||||| ||||| | || | || |||
Sbjct 101828 TTTCAAATTTAAAAATTCAAATATGTCTGCATGCCATGGTTCAAGATAGATAGCAAAAGC 101887
Query 154097 GCCTTTACGCTTG---CCGCCCTGATTTACGTGACGCACCATATTGTTGAAAACCCGAAG 154153
|| | |||| || || |||| ||| | | | | ||| || ||||| |||||
Sbjct 101888 ACCAGGTCTCTTGTTACCTCCTTGATCTACATATCTGGCTAAATTATTAAAAACACGAAG 101947
Query 154154 CATGGGTAGCAGACCGCTGGCGGTACCGTTTGT 154186
||| || | | |||| | | || ||||| ||
Sbjct 101948 CATAGGAACTAAACCGTTCGAAGTGCCGTTGGT 101980
>seq218
Length=661058
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| | ||| ||||| || || | ||| |||||| |||||||| ||||| |
Sbjct 352154 CCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 352213
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || || ||||| | |||||||| ||| | |||| ||||||||| || |||||
Sbjct 352214 AAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGA 352273
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGCTGTTCCACTGTGTCGGTGGGCTCCACC 139717
|| ||||||||||| ||| || || | | ||| | |||||| | || || ||
Sbjct 352274 ATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACT 352333
Query 139718 TCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | || || || || |||||||| || || ||||||||
Sbjct 352334 TCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Score = 98.7 bits (108), Expect = 1e-15
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| | |||||||||||| || | || || ||||||||||| || || ||
Sbjct 356226 CCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAA 356285
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| |||| ||||| | ||| || |||||| | || |||||||| || || |||||
Sbjct 356286 AGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGA 356345
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTGTTTTAGC-TGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| |||| | |||| | | ||| | ||| || | ||||| ||
Sbjct 356346 ATACCTTCCTTGTC-TTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAAC 356404
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
|| | || | ||||| || || | || ||||| || || |||||
Sbjct 356405 TTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452
Score = 91.5 bits (100), Expect = 1e-13
Identities = 143/202 (71%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || ||||||||||| ||||||||| | || | ||||| || ||||| ||
Sbjct 356484 GTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACCATCTTCCAGTTGTTTTCCT 356543
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| |||| | | |||||||| || || |||||||||||||| ||| |||||| |||
Sbjct 356544 GCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTTGTC-TTGAATTTTTGCTTT 356602
Query 139688 AGC-TGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGT 139746
| | | || | ||| || | || || || || | || | ||| || || || | ||
Sbjct 356603 AACATTCTCAATTGTATCTGATGGTTCAACTTCTAAAGTGATCGTTTTACCAGTGAGGGT 356662
Query 139747 TTTTACGAATATTTGCATAGCT 139768
|| ||||| ||||||||| ||
Sbjct 356663 CTTCACGAAAATTTGCATACCT 356684
Score = 89.7 bits (98), Expect = 5e-13
Identities = 158/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| | |||||||||||| |||| || || ||||| || ||||| ||||| |
Sbjct 356682 CCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 356741
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| || ||||| ||||| || |||||| | || | | ||| || || || ||
Sbjct 356742 AATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGGA 356801
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| || ||||| || ||| |||| | |||| | || | |||||| | || || ||
Sbjct 356802 ATACCCTCTTTATC-TTGAATTTTAGCCTTTACGTTCTCTATTGTGTCAGACGGTTCTAC 356860
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| ||| | || || || || | || || || || || |||||
Sbjct 356861 CTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908
Score = 84.2 bits (92), Expect = 2e-11
Identities = 99/134 (74%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| || || | ||| ||||| || || | ||| |||||| |||||||| ||||| |
Sbjct 357235 CCTCCACGAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 357294
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| ||| || ||||| | || ||||||||| | |||| |||||| || || |||||
Sbjct 357295 AATGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGA 357354
Query 139658 ATGCCTTCTTTGTC 139671
|| |||||||||||
Sbjct 357355 ATACCTTCTTTGTC 357368
>seq44
Length=1668621
Score = 96.9 bits (106), Expect = 3e-15
Identities = 117/158 (74%), Gaps = 6/158 (4%)
Strand=Plus/Minus
Query 58287 GCCTCAATGTTGCCCAAATCGCCGACGTGTCGCACCGCAGCGTTAGGCGCGCCATGAT-- 58344
|| || | ||| || | |||||| ||||||| ||| | || | ||| || |||||||
Sbjct 466054 GCTTCTACGTTTCCAAGATCGCCAACGTGTCTCACGTCTGCATCAGGAGCTCCATGATCT 465995
Query 58345 -TGCTACCCGTAGGATTGAAATGTTCGCCGGCCGAAGTGCATCCGTTACTCATATCGCCA 58403
|| || || |||||||||| | ||||| ||| | || ||||| | | || |||
Sbjct 465994 TTGTTATGCG---GATTGAAATGAGCACCGGCTGAAATACAGCCGTTGGTGTTGTCACCA 465938
Query 58404 AATTCGTGCACGTGAAAGCCGTGCAGTCCTTTCGGCAA 58441
||||||||||| ||||| ||||| |||||||||| |||
Sbjct 465937 AATTCGTGCACATGAAATCCGTGGAGTCCTTTCGTCAA 465900
>seq25
Length=1883024
Score = 93.3 bits (102), Expect = 4e-14
Identities = 159/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 139538 CCGCCTCGTAAACGCAAAACTAAGTGAATCGTAGACTCTTTTTGAATGTTATAATCGCTC 139597
|| |||| |||||| || || ||||| | || || ||||| ||||||||||| ||
Sbjct 1512025 CCTCCTCTTAAACGTAACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAA 1512084
Query 139598 ATTGTGCTCGAGTCTTCGAGCTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 139657
| || | ||||| | || |||||||| | || | | || ||||| |||||
Sbjct 1512085 AGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGA 1512144
Query 139658 ATGCCTTCTTTGTCGGTGATTTTTTG-TTTTAGCTGTTCCACTGTGTCGGTGGGCTCCAC 139716
|| ||||| ||||| ||| | || | |||| | ||| | |||||| | ||| || ||
Sbjct 1512145 ATACCTTCCTTGTC-TTGAATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAAC 1512203
Query 139717 CTCAACGGTCACCGTCTTGCCGGTCAACGTTTTTACGAATATTTGCAT 139764
||||| ||| | || || ||||| | ||||| || || ||||||||
Sbjct 1512204 CTCAAGGGTGATTGTTTTTCCGGTAAGAGTTTTCACAAAAATTTGCAT 1512251
>seq428
Length=160056
Score = 89.7 bits (98), Expect = 5e-13
Identities = 138/197 (70%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 139568 GTAGACTCTTTTTGAATGTTATAATCGCTCATTGTGCTCGAGTCTTCGAGCTGTTTACCA 139627
|| || || ||||| ||||| ||||| || || | ||||| | ||||| |||
Sbjct 129640 GTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCATCTTCCAATTGTTTTCCA 129581
Query 139628 GCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTTCTTTGTCGGTGATTTTTTGTTTT 139687
||| | || |||||||| || || || || || |||||||| || ||||||| ||
Sbjct 129580 GCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTGGATTTTTGCCTTC 129521
Query 139688 AGCTGTTCCACTGTGTCGGTGGGCTCCACCTCAACGGTCACCGTCTTGCCGGTCAACGTT 139747
| | ||| | ||| |||| || || ||||| | || | ||||| || || || ||
Sbjct 129520 ACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGGTCTTACCCGTTAAAGTC 129461
Query 139748 TTTACGAATATTTGCAT 139764
|| ||||||||||||||
Sbjct 129460 TTCACGAATATTTGCAT 129444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 496039271209600
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