Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_003663.2
Length=224499
Score E
Sequences producing significant alignments: (Bits) Value
seq310 569 3e-157
seq12 329 5e-85
>seq310
Length=366558
Score = 569 bits (630), Expect = 3e-157
Identities = 1253/1857 (67%), Gaps = 31/1857 (2%)
Strand=Plus/Plus
Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798
|| ||||| || | || ||| ||||| || ||||| | || ||||||| || |||
Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598
Query 78799 TGCATACTCGTTAGT--TTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGAC 78856
|| || || | | ||| ||| | || | | | ||||| ||||| | ||| || |
Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656
Query 78857 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTT 78916
| || || || |||||||| | ||||| ||||| |||| || || |||| |||||
Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716
Query 78917 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 78973
|||| | ||||||||| | || ||||| || |||| || |||| ||||| |
Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776
Query 78974 ATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTA 79033
| |||| || || | || | || || ||| | |||| ||| | | | ||| || |
Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCA 100836
Query 79034 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 79093
|| ||||||| | ||| | || || || |||||||||||| || || | | || |
Sbjct 100837 AATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTAT 100896
Query 79094 AAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATG 79153
| | ||| || |||||||| || ||||||||||| ||||||||||| || ||||| |
Sbjct 100897 ATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAG 100956
Query 79154 CCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTA-TGATCTGATTTTATCT 79212
| || ||||| || || | | ||| |||||||| |||||| | | | ||||| ||
Sbjct 100957 CGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGC-AATTTTCGCT 101015
Query 79213 TTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGA 79272
|| | || |||||||||| | || | || |||||| | |||||| |||| |
Sbjct 101016 TTCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAA 101075
Query 79273 ATACCGTTAC-TAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAA 79331
|| || || | || | | | ||| || || |||||| || || || || || |
Sbjct 101076 ATCCCCTTGCTTACAGGACTA-CCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGAT 101134
Query 79332 TTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATC 79391
|||||| || || || | ||| |||||||| | ||||||||||| | | ||| || |
Sbjct 101135 TTCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTT 101194
Query 79392 TTGTGCTTCTAGGCTATCAAATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTT 79450
||||| |||| ||| | | || ||| | |||||| || || ||||| ||||
Sbjct 101195 CGCAGCTTCAGGGCTGTCATA-AGCTATACGAAGTAAAATAAAAGCATCGGCTAAACCTT 101253
Query 79451 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGAT 79510
| ||||| || || || ||||| || ||| ||| || ||| || ||||| | ||||
Sbjct 101254 GTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGAT 101313
Query 79511 AATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTA 79570
||||||||| || |||||||| || || || | | |||||| | || ||||
Sbjct 101314 AATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTA 101373
Query 79571 GTTTGAGAAAATC---AAATCGTCCATC---TATTACAAACATGTTCAACGCGACAGATG 79624
|| |||||| || || ||| |||||||||| |||| || | ||||
Sbjct 101374 ACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGATG 101433
Query 79625 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGT 79684
||| |||||| || || || || | || | ||||| | ||||| ||||| | |
Sbjct 101434 CCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAAT 101493
Query 79685 TACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 79744
| || | |||| |||||||| ||||||||||| || ||| |||| || ||||| ||||
Sbjct 101494 TGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTAT 101553
Query 79745 AAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 79804
| || ||||| ||||| |||||||| | ||||| | || || || | ||| |
Sbjct 101554 ATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATTTCT 101613
Query 79805 GAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGA 79864
|||| || | ||| ||||| | |||| ||| || | | ||| || |||| |
Sbjct 101614 GAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTTCAA 101673
Query 79865 ACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACT 79924
||| ||||||||| ||||| | ||| ||||||| | ||||||||||| ||||| |
Sbjct 101674 ACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACCAGT 101733
Query 79925 CTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 79984
|||| | | |||| ||||||||| | ||| || ||||| || || ||| | ||
Sbjct 101734 GCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAAAT 101793
Query 79985 CTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 80044
|||| | ||| ||| || ||||||||||| ||||| | || | || | | || |
Sbjct 101794 CTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATATGT 101853
Query 80045 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGAT 80104
| | |||||| ||||| | || || || | | | || |||| ||||| ||||| ||||
Sbjct 101854 CTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTGAT 101913
Query 80105 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTAC 80164
||| ||||| || |||||| |||| | | ||| |||| | ||| || || || |
Sbjct 101914 CTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGTGC 101973
Query 80165 CATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTC 80224
| ||||| || | || | || || | ||||| ||||| | || || | |
Sbjct 101974 CGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCAAAC 102033
Query 80225 CCCCTGCCATTTTAGAGATTAATGCGCATCGT--TTTAACGTATCATAGATGCCCTCTAT 80282
| |||||| |||||| || | || | | || | ||| | | | | ||||| || ||
Sbjct 102034 CACCTGCCGATTTAGAAATGAGAGCAC-TTGTAGTCAAACAT-TTACAAATGCCTTCAAT 102091
Query 80283 GCTATCATCAATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT--TCC 80339
|||||||||| || || || || ||||| || | | ||| | || || |||
Sbjct 102092 GCTATCATCAGGCATTGCTACCAAG-AAACACGATGAAA---GCTGAGGTCTTGTGGTCC 102147
Query 80340 C-GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398
| || || | |||||| || || || || || || |||| || ||||||||
Sbjct 102148 CAGCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACG 102207
Query 80399 TCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGT 80458
| || || || | |||||||| | ||||| || || || || ||||| | |||||
Sbjct 102208 TTTCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGT 102267
Query 80459 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTT 80518
| ||||||||||| ||||| || || | |||||| | || || ||| |||||||
Sbjct 102268 GTTGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTT 102327
Query 80519 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 80575
||||||||||||| ||||| ||||| || || || || | ||||| || || ||||
Sbjct 102328 TAAAACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384
>seq12
Length=2314596
Score = 329 bits (364), Expect = 5e-85
Identities = 615/899 (68%), Gaps = 7/899 (1%)
Strand=Plus/Minus
Query 49660 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAAT 49719
||||| || ||||| |||||||| || ||||| || ||||| || || || ||
Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037
Query 49720 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 49779
|| || || | ||| || ||||||||||| ||||||||||||| || | | | |||||
Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977
Query 49780 TCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 49839
|| | | | || || |||||||| ||||| ||||| || ||||||||
Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917
Query 49840 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 49899
|| || || | || || | ||| |||| | |||||| |||||||| || |||||
Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857
Query 49900 GTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATG--CAATAAATGTTTAAACATCA 49957
|| ||| | | || |||| ||| || ||||| | | |||||| |
Sbjct 281856 CGAATTATATCTGTTACTCGCTCTTTTGATGGTTTTTGAACAATATAAGA--AAACATTA 281799
Query 49958 AACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGA 50017
|||| || ||||| || |||| ||| || || | | ||| || || || ||||| || |
Sbjct 281798 AACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCA 281739
Query 50018 GTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGA 50077
|||| ||||| || || || || || |||||||| || | ||||| || |||||||
Sbjct 281738 GTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGA 281679
Query 50078 AGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCA-TGT 50136
| |||||||| || || ||||| ||||||| || ||| | | || | | | ||
Sbjct 281678 AAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTGC 281619
Query 50137 --ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 50194
||||| | |||||||||| |||||||| || ||||||||||| ||||| || ||||
Sbjct 281618 TGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCAT 281559
Query 50195 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 50254
| || ||| | | ||| || | || | |||||| || || | | ||||||||
Sbjct 281558 TGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATACA 281499
Query 50255 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 50314
|||| ||||| || ||||||||||| || || || || || || || | |||||| || |
Sbjct 281498 TTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTTA 281439
Query 50315 TCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 50374
|| |||||| || |||| || | | |||||||| || ||||| ||| || |
Sbjct 281438 CTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCAG 281379
Query 50375 CAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAAT 50434
||||||| || | ||||||| || ||||| |||| | || | |||| ||| |
Sbjct 281378 CAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAGT 281319
Query 50435 CATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 50494
| || ||||| | ||||||||||| |||||| || || || || || | |
Sbjct 281318 GGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCCT 281259
Query 50495 TATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553
| ||| | | ||| ||||| ||||||| || || || || || || || ||||||||
Sbjct 281258 TGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGGATTT 281200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 718232994300320
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