Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq310 569 3e-157 seq12 329 5e-85 >seq310 Length=366558 Score = 569 bits (630), Expect = 3e-157 Identities = 1253/1857 (67%), Gaps = 31/1857 (2%) Strand=Plus/Plus Query 78739 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAGAAA 78798 || ||||| || | || ||| ||||| || ||||| | || ||||||| || ||| Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598 Query 78799 TGCATACTCGTTAGT--TTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGAC 78856 || || || | | ||| ||| | || | | | ||||| ||||| | ||| || | Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656 Query 78857 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTT 78916 | || || || |||||||| | ||||| ||||| |||| || || |||| ||||| Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716 Query 78917 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 78973 |||| | ||||||||| | || ||||| || |||| || |||| ||||| | Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776 Query 78974 ATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCATTCCATAATTTTCTCTCGGTTA 79033 | |||| || || | || | || || ||| | |||| ||| | | | ||| || | Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCA 100836 Query 79034 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 79093 || ||||||| | ||| | || || || |||||||||||| || || | | || | Sbjct 100837 AATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTAT 100896 Query 79094 AAATATTACTGGTATATGGTTCCACCGATTCATTATTTCCCAAAATTTGAGCAGTTGATG 79153 | | ||| || |||||||| || ||||||||||| ||||||||||| || ||||| | Sbjct 100897 ATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAG 100956 Query 79154 CCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTA-TGATCTGATTTTATCT 79212 | || ||||| || || | | ||| |||||||| |||||| | | | ||||| || Sbjct 100957 CGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGC-AATTTTCGCT 101015 Query 79213 TTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACATTCCAAAGATCATATTGTAGA 79272 || | || |||||||||| | || | || |||||| | |||||| |||| | Sbjct 101016 TTCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAA 101075 Query 79273 ATACCGTTAC-TAGCGTATGATCCTGTGTATGTTTCATAAGGTCCTTCCTTTTCGGCTAA 79331 || || || | || | | | ||| || || |||||| || || || || || | Sbjct 101076 ATCCCCTTGCTTACAGGACTA-CCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGAT 101134 Query 79332 TTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTCGAAAATCTTCTTATTGAGATC 79391 |||||| || || || | ||| |||||||| | ||||||||||| | | ||| || | Sbjct 101135 TTCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTT 101194 Query 79392 TTGTGCTTCTAGGCTATCAAATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTT 79450 ||||| |||| ||| | | || ||| | |||||| || || ||||| |||| Sbjct 101195 CGCAGCTTCAGGGCTGTCATA-AGCTATACGAAGTAAAATAAAAGCATCGGCTAAACCTT 101253 Query 79451 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGAT 79510 | ||||| || || || ||||| || ||| ||| || ||| || ||||| | |||| Sbjct 101254 GTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGAT 101313 Query 79511 AATAATTAATATCTATAATTTTATTGAGATTCCTGACTATTACTTTGACCACATCCTTTA 79570 ||||||||| || |||||||| || || || | | |||||| | || |||| Sbjct 101314 AATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTA 101373 Query 79571 GTTTGAGAAAATC---AAATCGTCCATC---TATTACAAACATGTTCAACGCGACAGATG 79624 || |||||| || || ||| |||||||||| |||| || | |||| Sbjct 101374 ACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGATG 101433 Query 79625 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATTTCAGTGCAGAGGT 79684 ||| |||||| || || || || | || | ||||| | ||||| ||||| | | Sbjct 101434 CCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAAT 101493 Query 79685 TACTACACTTAATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 79744 | || | |||| |||||||| ||||||||||| || ||| |||| || ||||| |||| Sbjct 101494 TGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTAT 101553 Query 79745 AAAGAATGAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 79804 | || ||||| ||||| |||||||| | ||||| | || || || | ||| | Sbjct 101554 ATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATTTCT 101613 Query 79805 GAGCCTTTATTATAGACTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGA 79864 |||| || | ||| ||||| | |||| ||| || | | ||| || |||| | Sbjct 101614 GAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTTCAA 101673 Query 79865 ACTCGTCTCCCCAAACATCGTCTAATCCAGGACATTCGTCAGGACACATCAACGACCACT 79924 ||| ||||||||| ||||| | ||| ||||||| | ||||||||||| ||||| | Sbjct 101674 ACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACCAGT 101733 Query 79925 CTCCATCATCCTTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 79984 |||| | | |||| ||||||||| | ||| || ||||| || || ||| | || Sbjct 101734 GCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAAAT 101793 Query 79985 CTCTGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 80044 |||| | ||| ||| || ||||||||||| ||||| | || | || | | || | Sbjct 101794 CTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATATGT 101853 Query 80045 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGAT 80104 | | |||||| ||||| | || || || | | | || |||| ||||| ||||| |||| Sbjct 101854 CTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTGAT 101913 Query 80105 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTAC 80164 ||| ||||| || |||||| |||| | | ||| |||| | ||| || || || | Sbjct 101914 CTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGTGC 101973 Query 80165 CATTGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTC 80224 | ||||| || | || | || || | ||||| ||||| | || || | | Sbjct 101974 CGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCAAAC 102033 Query 80225 CCCCTGCCATTTTAGAGATTAATGCGCATCGT--TTTAACGTATCATAGATGCCCTCTAT 80282 | |||||| |||||| || | || | | || | ||| | | | | ||||| || || Sbjct 102034 CACCTGCCGATTTAGAAATGAGAGCAC-TTGTAGTCAAACAT-TTACAAATGCCTTCAAT 102091 Query 80283 GCTATCATCAATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT--TCC 80339 |||||||||| || || || || ||||| || | | ||| | || || ||| Sbjct 102092 GCTATCATCAGGCATTGCTACCAAG-AAACACGATGAAA---GCTGAGGTCTTGTGGTCC 102147 Query 80340 C-GCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACG 80398 | || || | |||||| || || || || || || |||| || |||||||| Sbjct 102148 CAGCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACG 102207 Query 80399 TCTCAATAGCTGATTCTATATCCCATTGATGAATTCCTACCGCGACACGCATTAACATGT 80458 | || || || | |||||||| | ||||| || || || || ||||| | ||||| Sbjct 102208 TTTCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGT 102267 Query 80459 GCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAAGATTTTTCCAAAGTTT 80518 | ||||||||||| ||||| || || | |||||| | || || ||| ||||||| Sbjct 102268 GTTGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTT 102327 Query 80519 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 80575 ||||||||||||| ||||| ||||| || || || || | ||||| || || |||| Sbjct 102328 TAAAACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384 >seq12 Length=2314596 Score = 329 bits (364), Expect = 5e-85 Identities = 615/899 (68%), Gaps = 7/899 (1%) Strand=Plus/Minus Query 49660 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTTCCTTCCAAT 49719 ||||| || ||||| |||||||| || ||||| || ||||| || || || || Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037 Query 49720 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 49779 || || || | ||| || ||||||||||| ||||||||||||| || | | | ||||| Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977 Query 49780 TCAGAAATCAATCTATCCGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 49839 || | | | || || |||||||| ||||| ||||| || |||||||| Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917 Query 49840 CCTATAAGTTTAACTGGAAGAGCCGCAGTAAGAAATTCTTGTTCAATGGATACCGCATCT 49899 || || || | || || | ||| |||| | |||||| |||||||| || ||||| Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857 Query 49900 GTTATAATAGATCTAACGGTTTCTTCACTCGGTGGATG--CAATAAATGTTTAAACATCA 49957 || ||| | | || |||| ||| || ||||| | | |||||| | Sbjct 281856 CGAATTATATCTGTTACTCGCTCTTTTGATGGTTTTTGAACAATATAAGA--AAACATTA 281799 Query 49958 AACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAAACGTGA 50017 |||| || ||||| || |||| ||| || || | | ||| || || || ||||| || | Sbjct 281798 AACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCA 281739 Query 50018 GTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCAGAAAAGA 50077 |||| ||||| || || || || || |||||||| || | ||||| || ||||||| Sbjct 281738 GTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGA 281679 Query 50078 AGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTGTCA-TGT 50136 | |||||||| || || ||||| ||||||| || ||| | | || | | | || Sbjct 281678 AAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTGC 281619 Query 50137 --ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCAT 50194 ||||| | |||||||||| |||||||| || ||||||||||| ||||| || |||| Sbjct 281618 TGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCAT 281559 Query 50195 TAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAAGACTATACA 50254 | || ||| | | ||| || | || | |||||| || || | | |||||||| Sbjct 281558 TGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATACA 281499 Query 50255 TTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCGGTAA 50314 |||| ||||| || ||||||||||| || || || || || || || | |||||| || | Sbjct 281498 TTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTTA 281439 Query 50315 TCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCGTCACTGGCTG 50374 || |||||| || |||| || | | |||||||| || ||||| ||| || | Sbjct 281438 CTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCAG 281379 Query 50375 CAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTAGTTTATTCCAAT 50434 ||||||| || | ||||||| || ||||| |||| | || | |||| ||| | Sbjct 281378 CAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAGT 281319 Query 50435 CATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTT 50494 | || ||||| | ||||||||||| |||||| || || || || || | | Sbjct 281318 GGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCCT 281259 Query 50495 TATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAATCTATTTGGATTT 50553 | ||| | | ||| ||||| ||||||| || || || || || || || |||||||| Sbjct 281258 TGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGGATTT 281200 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718232994300320