Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_004062.1
Length=119217
Score E
Sequences producing significant alignments: (Bits) Value
seq218 118 8e-22
seq428 104 2e-17
seq44 82.4 6e-11
seq25 82.4 6e-11
>seq218
Length=661058
Score = 118 bits (130), Expect = 8e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 42897 TAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTC 42956
||| |||||||||| || ||||| || || | |||||||| ||||| || | | ||
Sbjct 352168 TAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCATC 352227
Query 42957 GTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTC 43016
||||||||||| |||||||||||||| || || || || | || | ||||||||| ||
Sbjct 352228 TTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTC 352287
Query 43017 GCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076
|||| | || || | ||| |||||| | || || || | || || ||
Sbjct 352288 CTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATGGT 352347
Query 43077 TTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||||| |||| ||||| ||||||||||||||
Sbjct 352348 TTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Score = 107 bits (118), Expect = 1e-18
Identities = 154/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|||||||| || | ||| |||||||||| || ||||| || || | |||||||| |||
Sbjct 357235 CCTCCACGAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 357294
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
||||| | | || |||||||| || || ||||||||||| || ||||| || | ||
Sbjct 357295 AATGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGA 357354
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| ||||||||| || |||| | || || | ||| |||||| | || ||
Sbjct 357355 ATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCTACT 357414
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAA 43099
|| | || || ||||| || ||||| || || ||||
Sbjct 357415 TCCAGTGTGATTGTTTTACCAGTTAGTGTCTTAACAA 357451
Score = 95.1 bits (104), Expect = 9e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
||||| | || ||| | |||||||||| |||| || ||||| | ||| ||||||||
Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAG 356513
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| ||||| | || |||| |||||| || ||||| || || | ||| ||||| | ||
Sbjct 356514 AGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGA 356573
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||||| || || |||| || | ||| ||| || | || ||
Sbjct 356574 ATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACT 356633
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| || || ||||| || || || || ||||| |||||||||||
Sbjct 356634 TCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 89.7 bits (98), Expect = 4e-13
Identities = 156/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
|| || || || || || |||||||| | || ||||| || | ||| ||||| ||
Sbjct 355998 CCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAA 356057
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
| || ||| | || ||||| ||||| ||||||||||| | || |||||||| | ||
Sbjct 356058 AGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGG 356117
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||| || || || ||||||| | | | ||| || | ||| ||
Sbjct 356118 ATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACT 356177
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|| | ||||||||||| || |||| ||||| || || ||||||||
Sbjct 356178 TCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
>seq428
Length=160056
Score = 104 bits (114), Expect = 2e-17
Identities = 159/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942
||||| | || |||||| |||||||| | || |||||||| | |||||||| |||
Sbjct 129670 CCTCCCCTCAATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGAC 129611
Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002
|| ||||| | || ||||||||||| || |||||||| | || ||||| || | ||
Sbjct 129610 AAAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGA 129551
Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062
| |||||||| || ||| | || || | | | ||| ||| | |||||
Sbjct 129550 ATTCCTTCTTTATCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACC 129491
Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
|||| || || || || || |||| ||| ||||| || ||||||||
Sbjct 129490 TCTAAAGTGATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444
>seq44
Length=1668621
Score = 82.4 bits (90), Expect = 6e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Minus
Query 45660 TGCGGATTGAAGTGCTCGCCGGCCGACGTACAACCGTTGCTCGTATCACCAAATTCGTGC 45719
||||||||||| || | ||||| || |||| |||||| | | |||||||||||||||
Sbjct 465988 TGCGGATTGAAATGAGCACCGGCTGAAATACAGCCGTTGGTGTTGTCACCAAATTCGTGC 465929
Query 45720 ACATGAAATCCGTGG 45734
|||||||||||||||
Sbjct 465928 ACATGAAATCCGTGG 465914
>seq25
Length=1883024
Score = 82.4 bits (90), Expect = 6e-11
Identities = 146/213 (69%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 42897 TAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTC 42956
||||||||| || | || || || || | || || || || | ||||| | ||
Sbjct 1512039 TAACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAAAGAGTACGGCCATC 1512098
Query 42957 GTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTC 43016
|| ||||| || || || ||||| || | ||||||||| | || | |||||| || ||
Sbjct 1512099 TTCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTC 1512158
Query 43017 GCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGT 43076
||| | | || || | | | |||||| | || || || | || || ||
Sbjct 1512159 TTGAATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGT 1512218
Query 43077 TTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109
||||||||| |||||||||||||||||||||||
Sbjct 1512219 TTTTCCGGTAAGAGTTTTCACAAAAATTTGCAT 1512251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 381351064007304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |