Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_004105.1
Length=209771
Score E
Sequences producing significant alignments: (Bits) Value
seq310 475 5e-129
seq12 347 2e-90
>seq310
Length=366558
Score = 475 bits (526), Expect = 5e-129
Identities = 1225/1852 (66%), Gaps = 31/1852 (2%)
Strand=Plus/Plus
Query 70827 TTTCGTACGTAGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCAT 70886
||| || | || ||| ||||| || ||||| | || ||||||| |||||||| ||
Sbjct 100544 TTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAATGAAT 100603
Query 70887 ACTCGTTAGT--TTGGAATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGA 70944
|| | | ||| |||| | || | | || |||||||| | ||||| || ||
Sbjct 100604 GGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGCTCTGG 100661
Query 70945 TCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAA 71004
|| || |||||||| | ||||| ||||| |||| || || |||| |||||||||
Sbjct 100662 TCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTTCCCAC 100721
Query 71005 ATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGGATCCA 71061
| ||||||||| | || ||||| || |||| || |||| ||||| || |||
Sbjct 100722 ACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTGAGCCA 100781
Query 71062 CCATCTGCAATAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACT 71121
| || |||| || | ||||| ||| | |||| ||| | | | ||| || ||| ||
Sbjct 100782 CAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCAAATCT 100841
Query 71122 CTAAGGAGATGAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATA 71181
||||| | |||| | || || || |||||||||||| || || | | || || | |
Sbjct 100842 CTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTATATAGA 100901
Query 71182 TTACTGGTATACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTC 71241
|| || || ||||| || || |||||||| ||||||||||| || ||||| || ||
Sbjct 100902 TTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAGCGGTA 100961
Query 71242 GGCATAGGTGCCACCAATAGACTATTTCTAAGACCATG-TGATCGGATTTTATCTTTTAG 71300
||||| || || | | || |||||||| ||| | | | | ||||| |||| |
Sbjct 100962 GGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCA-ATTTTCGCTTTCAA 101020
Query 71301 AGATTCCCAATTCCAAAGATCCGATGGTACAACNNNNNNNNNNNNNNNNNNNNNNATGCC 71360
|| |||||| ||| | || | || || ||
Sbjct 101021 AGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAAATCCC 101080
Query 71361 GTTACTAGC-GTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCAC 71419
|| || | | | | ||| |||| || || || || ||||| || || | |||||
Sbjct 101081 CTTGCTTACAGGACTA-CCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATTTCAC 101139
Query 71420 AACTCGCCTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTG 71479
| || || || | ||| || ||||| | ||||||||||| | | ||| || | |
Sbjct 101140 AGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTTCGCAG 101199
Query 71480 CTTCCGGGCTATCAAATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTTGAACG 71538
|||| ||||| ||| | | || ||| | |||||| || || ||||| ||||| ||
Sbjct 101200 CTTCAGGGCTGTCATAAGC-TATACGAAGTAAAATAAAAGCATCGGCTAAACCTTGTACA 101258
Query 71539 CCAATACCGATAGGTCTGTGTCTCTTATTAGAAATTTCAGCTTCTGGAATAGGATAATAA 71598
|| || || || |||||||| ||| ||| || ||| || ||||| | |||||||||
Sbjct 101259 CCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGATAATAA 101318
Query 71599 TTAATATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTG 71658
|||| || |||||||| || || ||| | | |||||| | || |||| ||
Sbjct 101319 TTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTAACTTC 101378
Query 71659 AGAAAATCAAA---TCTCCCATCTA---TTACAAACACGTTCAAGGCAACAGATGCCAGA 71712
|||||| | | | | ||| ||||||||| |||| |||| ||||||| |
Sbjct 101379 TTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGATGCCAAA 101438
Query 71713 TTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTACTA 71772
||||| || || || || | || | ||||| | |||||| ||||| | ||| ||
Sbjct 101439 TTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAATTGCTG 101498
Query 71773 CACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGA 71832
| | || |||||||| ||||||||||| || ||| |||| || ||||| ||||| ||
Sbjct 101499 CTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTATATAGC 101558
Query 71833 ATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCC 71892
|| || ||||| |||||||| | ||||| | || || || | ||| | ||||
Sbjct 101559 ATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATTTCTGAGCA 101618
Query 71893 TTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCG 71952
|| | | ||||| | |||| ||| || | | ||| || |||| ||||
Sbjct 101619 GGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTTCAAACTTT 101678
Query 71953 TCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTCCA 72012
||||||||| || || | ||| ||||||| || |||||||||| |||||| | |||
Sbjct 101679 TCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACCAGTGCCCA 101738
Query 72013 TCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTG 72072
| | | |||| ||||||||| | ||| || ||||| || || ||| | ||||||
Sbjct 101739 TTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAAATCTCTT 101798
Query 72073 GTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAA 72132
| ||| ||| || ||||||||||| ||||| | || | || | | || || | |
Sbjct 101799 GCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATATGTCTGCA 101858
Query 72133 TGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATG 72192
||||| ||||| | || || || | | | || || | ||||| ||||| |||||||
Sbjct 101859 TGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTGATCTACA 101918
Query 72193 TATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTG 72252
||||| || |||||| |||| | | ||| |||| | ||| || || | || |||
Sbjct 101919 TATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGTGCCGTTG 101978
Query 72253 GTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCCCT 72312
|| || | || | || || | ||||| |||||| | || || | || |||
Sbjct 101979 GTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCAAACCACCT 102038
Query 72313 GCCATTTTAGAGATTAATGCGCATCGT--TTTAACGTATCATAGATGCCCTCTATACTAT 72370
||| |||||| || | || | | || | ||| | | | | ||||| || || ||||
Sbjct 102039 GCCGATTTAGAAATGAGAGCAC-TTGTAGTCAAACAT-TTACAAATGCCTTCAATGCTAT 102096
Query 72371 CATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT--TCCC-GCA 72426
|||| || || || || ||||| || | | ||| | || || |||| ||
Sbjct 102097 CATCAGGCATTGCTACCAAG-AAACACGATGAAA---GCTGAGGTCTTGTGGTCCCAGCT 102152
Query 72427 TTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCA 72486
|| | |||||| || || || || || || |||| || ||||||||| ||
Sbjct 102153 GAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACGTTTCT 102212
Query 72487 ATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGA 72546
|| || | |||||||| | || || || || || || ||||| | ||| || |||
Sbjct 102213 ATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGTGTTGA 102272
Query 72547 GGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAA 72606
|||||||| ||||| || || | |||||| | || || ||| ||||||||||||
Sbjct 102273 GGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTTTAAAA 102332
Query 72607 CCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTT 72658
|||||||| ||||| ||||| || || || || | ||||| ||||| ||||
Sbjct 102333 CCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384
>seq12
Length=2314596
Score = 347 bits (384), Expect = 2e-90
Identities = 623/904 (69%), Gaps = 17/904 (2%)
Strand=Plus/Minus
Query 41765 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAAT 41824
||||| || ||||| |||||||| || ||||| || ||||| ||||| || ||
Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037
Query 41825 GATATATTTTCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAAT 41884
|| || || | ||| || ||||||||||| ||||||||||||| || | | | |||||
Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977
Query 41885 TCAGAAATCAATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATT 41944
|| | | | || || | ||||| ||||| ||||| || ||||||||
Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917
Query 41945 CCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCT 42004
|| || || | || || | ||| |||| | |||||| |||||||| || || ||
Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857
Query 42005 GTTATAATAGATCTTACTGTTTCTTCACTCGGTGGAT-----ACAATAAATGTTTAAACA 42059
|| ||| | ||||| |||| | | ||| | |||||| | | |||||
Sbjct 281856 CGAATTATATCTGTTACTCGCTCTT---TTGATGGTTTTTGAACAATATAAGA--AAACA 281802
Query 42060 TCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACG 42119
| ||||| || ||||| || |||| ||| ||||| | | ||| | || || ||||| |
Sbjct 281801 TTAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATG 281742
Query 42120 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAA 42179
| ||||| ||||| || || || || || |||||||| |||| ||||| ||| ||||
Sbjct 281741 TCAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAA 281682
Query 42180 AGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCA- 42238
|||| |||||||| || || ||||| |||| || || ||| | ||| | | |
Sbjct 281681 AGAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTAC 281622
Query 42239 TGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGG 42296
|| ||||| | |||||||||| |||||||| || ||||||||||| ||||| || |
Sbjct 281621 TGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAG 281562
Query 42297 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAT--GTATCGATCAAAAGACT 42354
|||| || ||| | | ||| || | || | || |||| || || || | | |||
Sbjct 281561 CATTGAAAAGAAATTCTTTCTCTT--CTGGGTCAAATATATAAGTGTCAATGAGAGTACT 281504
Query 42355 ATACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTC 42414
||||||||||||||| || ||||||||||| || || || || || || || | |||||
Sbjct 281503 ATACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTC 281444
Query 42415 GGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACT 42474
|| || ||||||||| || |||| || | | ||||| || || ||||| |||
Sbjct 281443 AGTTACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGA 281384
Query 42475 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAATTTATT 42534
|| |||||||| || | ||||||| || |||| |||| || || || ||||
Sbjct 281383 TGCAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATC 281324
Query 42535 CCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGC 42594
||| | | || ||||| | |||||||||||| ||||| || || ||||| ||
Sbjct 281323 CCAGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGC 281264
Query 42595 CTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCTATTTGG 42654
| || ||| | | ||| || || |||||||||| || || || || || || ||||
Sbjct 281263 TTCCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGG 281204
Query 42655 ATTT 42658
||||
Sbjct 281203 ATTT 281200
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 671105743710880
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