Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq12 194 2e-44
seq296 131 2e-25
>seq12
Length=2314596
Score = 194 bits (214), Expect = 2e-44
Identities = 570/861 (66%), Gaps = 32/861 (4%)
Strand=Plus/Plus
Query 125010 TATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAG 125069
|||| ||||||||||||| |||||| | ||| | || ||||| ||||| |||||
Sbjct 281234 TATCCAGACATTTGGGAAAAGTACAAGGAAGCTGAAGCTTCCTTCTGGACAACAGAAGAA 281293
Query 125070 GTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG 125129
|| || || || |||||||| | | ||||| | | | ||| ||| | |
Sbjct 281294 GTAGACCTTTCTAAGGACCTTGCCCACTGGGATAAGTTGTCAAATGA---TGAAAGGCAT 281350
Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT- 125188
|| || || || | | ||||| ||||| | || |||||||| || || || || ||
Sbjct 281351 TTCATTTCACATGTACTTGCCTTTTTTGCTGCATCTGATGGAATTGTAAATGAAAACCTT 281410
Query 125189 GTTGACACGATTCTCTCAAGAGTTGACCATTC-CAGAGGTGTCGT-GCTTTTACGGATTC 125246
|| || | ||||| |||||| | || | | | |||| |||| ||||||| || |||
Sbjct 281411 GTAGAGA-GATTCAGTCAAGAAGT-ACAAGTAACTGAGGC-TCGTTGCTTTTATGGTTTC 281467
Query 125247 CAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATT 125306
||||| ||||| || | || || |||||||| ||| || ||||||| || ||
Sbjct 281468 CAAATTGCCATTGAAAATATCCATTCAGAAATGTATAGTACTCTCATTGACACTTATATA 281527
Query 125307 CGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGT 125366
|| || || ||| | | || || || || || || || |||| | | |
Sbjct 281528 TTTGACCCAGAAGAGAAAGAATTTCTTTTCAATGCTATTGAAACCATGCCTTGTGTTAAG 281587
Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426
|| |||||| | |||| ||| |||||| | || | | | | | || ||
Sbjct 281588 AAGAAGGCTGATTGGGCTCTTCATTGGATCAGCAGTAAGAATGCAACATTCCCAGAACGA 281647
Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486
| || ||||| || || || || || || |||||||| || |||||||| || ||||||
Sbjct 281648 GTTGTTGCATTTGCAGCTGTGGAAGGAATTTTCTTTTCAGGAAGTTTTGCTGCTATCTTT 281707
Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546
||||||||||| || || || ||||| |||||||| ||| ||| |||| |||||
Sbjct 281708 TGGCTCAAGAAACGGGGTCTTATGCCAGGACTGACATTTTCTAATGAGCTTATTTCTCGC 281767
Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAG 125606
|| || || | || ||||| ||||| | || ||||| ||| | |
Sbjct 281768 GATGAAGGTTTGCATTGTGATTTTGCTTGTTTAATGTTT--------TCT---TATATTG 281816
Query 125607 TGCAGATCCAGCGATGAAAAG-GTCATCAACA-TTGTAA---CCGATGCCGTGAGGATAG 125661
| || | | | || ||||| | | |||| | ||| |||||| || | || |
Sbjct 281817 TTCAAA---AACCATCAAAAGAGCGAGTAACAGATATAATTCGCGATGCAGTTAAAATTG 281873
Query 125662 AACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAA 125721
|||| || ||| |||| || | | || || ||| | ||||| ||||| ||||| || |
Sbjct 281874 AACAGGAATTTTTAACTGATGCTTTGCCTGTAAGCCTAATTGGTATGAATTGCAAACTGA 281933
Query 125722 TGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACT-GTACGAGTTGATTGGCCGCAAG 125780
||| |||| || || ||||| || || ||||| | ||| |||||| | | |||
Sbjct 281934 TGTCTCAGTATATCGAATTTGTAGCTGACCGTCTTTTAGTA-GAGTTGGGTTGTGATAAG 281992
Query 125781 ATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATAT-CACTAGAGGGTAAGAC 125839
||||| || | |||||||| ||||| || |||| || || | |||| || || |||||
Sbjct 281993 ATTTATAATGTTAAGAATCCGTTTGACTTTATGAACAAAATTTCCACT-GATGGCAAGAC 282051
Query 125840 CAACTTTTTCGAGAAGAAGGT 125860
|| || || || ||||| ||
Sbjct 282052 AAATTTCTTTGAAAAGAAAGT 282072
>seq296
Length=775295
Score = 131 bits (144), Expect = 2e-25
Identities = 367/551 (67%), Gaps = 18/551 (3%)
Strand=Plus/Plus
Query 69929 GGCGTCATCGAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCT---G 69985
||||| |||||||| | ||||| | || ||| || ||||||||||| ||
Sbjct 25440 GGCGTAGTCGAGGAGATGCTGTGGTTAATAAAAGGAAGCACAAATGCCAAAGAACTTTCT 25499
Query 69986 AGCCGAAAGGGTGTACACATTTGGAGCGGCAACAGTAGTCGA-AGCGT-TTTGGATTCGC 70043
| | |||| ||| | || ||| | ||||||| |||| | || |||||||
Sbjct 25500 ACCAGAAA---CGTAAAAATATGGGATGTCAACAGT--TCGAGGGAGTATTTGGATAGAA 25554
Query 70044 TCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGC 70103
| || || ||| || ||||||| || |||| || | || || || |||||| | |
Sbjct 25555 TGGGGTTTGGGGACCGAGAAGAGGGAGACTTGGGTCCGATATATGGGTTTCAGTGGCGTC 25614
Query 70104 ACTCGGGCACCAAGTATGTAGAC-TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAA 70162
| | || | ||||| || | |||||| || | || || | | || | ||||||
Sbjct 25615 ATTTTGGAGCTGAGTATAGAGGCATGCGAGCCA-ATTACGCGAATGAAGGAATCGATCAA 25673
Query 70163 TTGCAGACAA-TCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTG 70221
||| || ||| | ||| | || |||| | |||| | ||||| ||||| | | ||
Sbjct 25674 TTG-AGTCAAGTGATTAATACAATCAAAAATTATCCGAATGATAGAAGGATAATCTTATG 25732
Query 70222 CTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCA 70281
|| |||||||||| || | | |||||||| || ||||| ||||| ||| | | ||
Sbjct 25733 TTCGTGGAATCCTGTGGACATACCACAAATGGCTCTTCCACCCTGTCATTGTCTCGTACA 25792
Query 70282 GTTTTACTCGT--ACGATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATG 70339
|||| |||| | ||| | ||||||| | || | || || || ||||| |||
Sbjct 25793 ATTTT--TCGTAAATAATGACGAATTGTCTTCGTTGTTATACCAAAGATCGGCCGATATG 25850
Query 70340 GGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCAC 70399
|| || || ||||| || |||||||| || || || | | ||| |||||| |||||
Sbjct 25851 GGACTGGGGGTACCGTTCAACATTGCGAGTTACGCTCTCCTAACGGTCATGATAGCTCAT 25910
Query 70400 ATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTA 70459
| ||||| | ||| | ||| || ||||||| ||||||||| |||| | | | |
Sbjct 25911 GTGACCGGTTTAAAACCCAGCGAATTTATACACACGATTGGCGACAGTCACATATTTCAA 25970
Query 70460 AATCACATCGA 70470
|||||||| ||
Sbjct 25971 AATCACATAGA 25981
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 741022258198880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |