Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq12 194 2e-44 seq296 131 2e-25 >seq12 Length=2314596 Score = 194 bits (214), Expect = 2e-44 Identities = 570/861 (66%), Gaps = 32/861 (4%) Strand=Plus/Plus Query 125010 TATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTGGACGGTCGAAGAG 125069 |||| ||||||||||||| |||||| | ||| | || ||||| ||||| ||||| Sbjct 281234 TATCCAGACATTTGGGAAAAGTACAAGGAAGCTGAAGCTTCCTTCTGGACAACAGAAGAA 281293 Query 125070 GTCGATCTGTCCAAGGACCTGTACGATTGGGAGACTCGTTTGACTGAAACTGAGCGAGAG 125129 || || || || |||||||| | | ||||| | | | ||| ||| | | Sbjct 281294 GTAGACCTTTCTAAGGACCTTGCCCACTGGGATAAGTTGTCAAATGA---TGAAAGGCAT 281350 Query 125130 TTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAATCGTCAACGACAATCT- 125188 || || || || | | ||||| ||||| | || |||||||| || || || || || Sbjct 281351 TTCATTTCACATGTACTTGCCTTTTTTGCTGCATCTGATGGAATTGTAAATGAAAACCTT 281410 Query 125189 GTTGACACGATTCTCTCAAGAGTTGACCATTC-CAGAGGTGTCGT-GCTTTTACGGATTC 125246 || || | ||||| |||||| | || | | | |||| |||| ||||||| || ||| Sbjct 281411 GTAGAGA-GATTCAGTCAAGAAGT-ACAAGTAACTGAGGC-TCGTTGCTTTTATGGTTTC 281467 Query 125247 CAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGATTGACATGTACATT 125306 ||||| ||||| || | || || |||||||| ||| || ||||||| || || Sbjct 281468 CAAATTGCCATTGAAAATATCCATTCAGAAATGTATAGTACTCTCATTGACACTTATATA 281527 Query 125307 CGCGATCCGCAACGTAAACACATGCTCTTTAACGCAATCGACACGGTGCCGTCTATACGT 125366 || || || ||| | | || || || || || || || |||| | | | Sbjct 281528 TTTGACCCAGAAGAGAAAGAATTTCTTTTCAATGCTATTGAAACCATGCCTTGTGTTAAG 281587 Query 125367 AAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTTCGTACGCCGACAGA 125426 || |||||| | |||| ||| |||||| | || | | | | | || || Sbjct 281588 AAGAAGGCTGATTGGGCTCTTCATTGGATCAGCAGTAAGAATGCAACATTCCCAGAACGA 281647 Query 125427 CTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTTTTGCGGCCATCTTT 125486 | || ||||| || || || || || || |||||||| || |||||||| || |||||| Sbjct 281648 GTTGTTGCATTTGCAGCTGTGGAAGGAATTTTCTTTTCAGGAAGTTTTGCTGCTATCTTT 281707 Query 125487 TGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACGAGTTTATATCTCGA 125546 ||||||||||| || || || ||||| |||||||| ||| ||| |||| ||||| Sbjct 281708 TGGCTCAAGAAACGGGGTCTTATGCCAGGACTGACATTTTCTAATGAGCTTATTTCTCGC 281767 Query 125547 GACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTTTCGCAACTATCTGCGTCCCGAG 125606 || || || | || ||||| ||||| | || ||||| ||| | | Sbjct 281768 GATGAAGGTTTGCATTGTGATTTTGCTTGTTTAATGTTT--------TCT---TATATTG 281816 Query 125607 TGCAGATCCAGCGATGAAAAG-GTCATCAACA-TTGTAA---CCGATGCCGTGAGGATAG 125661 | || | | | || ||||| | | |||| | ||| |||||| || | || | Sbjct 281817 TTCAAA---AACCATCAAAAGAGCGAGTAACAGATATAATTCGCGATGCAGTTAAAATTG 281873 Query 125662 AACAAGAGTTTCTAACCGAATCCCTACCGGTCAGCATGATTGGCATGAACTGCAAGCTAA 125721 |||| || ||| |||| || | | || || ||| | ||||| ||||| ||||| || | Sbjct 281874 AACAGGAATTTTTAACTGATGCTTTGCCTGTAAGCCTAATTGGTATGAATTGCAAACTGA 281933 Query 125722 TGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACT-GTACGAGTTGATTGGCCGCAAG 125780 ||| |||| || || ||||| || || ||||| | ||| |||||| | | ||| Sbjct 281934 TGTCTCAGTATATCGAATTTGTAGCTGACCGTCTTTTAGTA-GAGTTGGGTTGTGATAAG 281992 Query 125781 ATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATAT-CACTAGAGGGTAAGAC 125839 ||||| || | |||||||| ||||| || |||| || || | |||| || || ||||| Sbjct 281993 ATTTATAATGTTAAGAATCCGTTTGACTTTATGAACAAAATTTCCACT-GATGGCAAGAC 282051 Query 125840 CAACTTTTTCGAGAAGAAGGT 125860 || || || || ||||| || Sbjct 282052 AAATTTCTTTGAAAAGAAAGT 282072 >seq296 Length=775295 Score = 131 bits (144), Expect = 2e-25 Identities = 367/551 (67%), Gaps = 18/551 (3%) Strand=Plus/Plus Query 69929 GGCGTCATCGAGGAGCTCTTGTGGATGATTTCCGGATCGACCAATGCCAAAGAGCT---G 69985 ||||| |||||||| | ||||| | || ||| || ||||||||||| || Sbjct 25440 GGCGTAGTCGAGGAGATGCTGTGGTTAATAAAAGGAAGCACAAATGCCAAAGAACTTTCT 25499 Query 69986 AGCCGAAAGGGTGTACACATTTGGAGCGGCAACAGTAGTCGA-AGCGT-TTTGGATTCGC 70043 | | |||| ||| | || ||| | ||||||| |||| | || ||||||| Sbjct 25500 ACCAGAAA---CGTAAAAATATGGGATGTCAACAGT--TCGAGGGAGTATTTGGATAGAA 25554 Query 70044 TCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATTCCAGTGGAGGC 70103 | || || ||| || ||||||| || |||| || | || || || |||||| | | Sbjct 25555 TGGGGTTTGGGGACCGAGAAGAGGGAGACTTGGGTCCGATATATGGGTTTCAGTGGCGTC 25614 Query 70104 ACTCGGGCACCAAGTATGTAGAC-TGCGAGACAGACTATTCGGGTCAGGGTGTTGATCAA 70162 | | || | ||||| || | |||||| || | || || | | || | |||||| Sbjct 25615 ATTTTGGAGCTGAGTATAGAGGCATGCGAGCCA-ATTACGCGAATGAAGGAATCGATCAA 25673 Query 70163 TTGCAGACAA-TCATTGACACTCTCAAGACCAATCCAACAGATAGGAGGATCGTAATGTG 70221 ||| || ||| | ||| | || |||| | |||| | ||||| ||||| | | || Sbjct 25674 TTG-AGTCAAGTGATTAATACAATCAAAAATTATCCGAATGATAGAAGGATAATCTTATG 25732 Query 70222 CTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCACTGTTTGGCTCA 70281 || |||||||||| || | | |||||||| || ||||| ||||| ||| | | || Sbjct 25733 TTCGTGGAATCCTGTGGACATACCACAAATGGCTCTTCCACCCTGTCATTGTCTCGTACA 25792 Query 70282 GTTTTACTCGT--ACGATGGCAAATTGTCATGCTTAATGTATCAGAGGAGTGCCGACATG 70339 |||| |||| | ||| | ||||||| | || | || || || ||||| ||| Sbjct 25793 ATTTT--TCGTAAATAATGACGAATTGTCTTCGTTGTTATACCAAAGATCGGCCGATATG 25850 Query 70340 GGCCTCGGTGTACCCTTTAACATTGCAAGCTATTCTATGTTGACGCACATGATTGCTCAC 70399 || || || ||||| || |||||||| || || || | | ||| |||||| ||||| Sbjct 25851 GGACTGGGGGTACCGTTCAACATTGCGAGTTACGCTCTCCTAACGGTCATGATAGCTCAT 25910 Query 70400 ATTACCGGCCTGAAAGCGCACGAGTTCGTACACACCATTGGCGACGCTCACGTGTATTTA 70459 | ||||| | ||| | ||| || ||||||| ||||||||| |||| | | | | Sbjct 25911 GTGACCGGTTTAAAACCCAGCGAATTTATACACACGATTGGCGACAGTCACATATTTCAA 25970 Query 70460 AATCACATCGA 70470 |||||||| || Sbjct 25971 AATCACATAGA 25981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741022258198880