Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_005068.1
Length=110907
Score E
Sequences producing significant alignments: (Bits) Value
seq218 149 4e-31
seq428 132 3e-26
>seq218
Length=661058
Score = 149 bits (164), Expect = 4e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
|||||||||||||| | |||||||| || ||| |||||||||||||||||||||
Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAG 356513
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
| ||| |||| |||| ||||||||||||||| || |||| ||||| || | ||
Sbjct 356514 AGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGA 356573
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
| |||||||| ||| ||||||| ||| || | ||| ||||||| || || ||
Sbjct 356574 ATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACT 356633
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || |||||||| || | |||||||| || ||||||||
Sbjct 356634 TCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 114 bits (126), Expect = 9e-21
Identities = 162/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 43895 CCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTT 43954
|| ||||| | | ||| |||||||| || || |||||||| ||||| || |||||
Sbjct 352154 CCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 352213
Query 43955 AATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGT 44014
|| | |||| ||||||||||| || ||||| ||||| ||||||||||| ||||
Sbjct 352214 AAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGA 352273
Query 44015 ACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACA 44074
| ||||||||| || || || || || | ||| || |||| || || ||
Sbjct 352274 ATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACT 352333
Query 44075 TCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCATG 44122
|| | || || ||||| || ||||| || || ||||| |||||||||
Sbjct 352334 TCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCATG 352381
Score = 105 bits (116), Expect = 5e-18
Identities = 145/203 (71%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 43909 TAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTTTAATTGACGCTCATC 43968
||| |||||||| || || |||||||| ||||| || ||||| ||| | ||||
Sbjct 357249 TAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAATGTTCTACCATC 357308
Query 43969 GTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGGTACACCTTCTTTATC 44028
|||||||| || || ||||| ||||| ||||| ||||| |||| | ||||||||| ||
Sbjct 357309 TTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTGTC 357368
Query 44029 TGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCACATCGACCGTAATTGT 44088
|| || || || | ||| || |||| ||| || || || | || |||||
Sbjct 357369 CTGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCTACTTCCAGTGTGATTGT 357428
Query 44089 TTTACCGGTTAAAGTCTTCACAA 44111
|||||| |||| ||||| ||||
Sbjct 357429 TTTACCAGTTAGTGTCTTAACAA 357451
Score = 95.1 bits (104), Expect = 9e-15
Identities = 160/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
||| |||| | || || |||||||||| || || || |||||||||||||| |
Sbjct 355997 ACCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATC-TG 356055
Query 43954 TAATTG-ACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAG 44012
|| | || |||| ||||| ||||| || ||||| || | ||||| || || | |
Sbjct 356056 AAAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTG 356115
Query 44013 GTACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCA 44072
| | |||||| || ||| |||||| |||||| | | | ||||| | ||||| |
Sbjct 356116 GGATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTA 356175
Query 44073 CATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
| || | || || |||||||| ||||| || || || || ||||||||
Sbjct 356176 CTTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
>seq428
Length=160056
Score = 132 bits (146), Expect = 3e-26
Identities = 166/228 (73%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 43894 ACCTCCTCTCAATCTTAACACCAAATGTAGCGTGCTCTCTTTTTGAATATTATAATCGTT 43953
|||||| ||||||||||| |||||||| | || || ||||| || || |||||
Sbjct 129671 ACCTCCCCTCAATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGA 129612
Query 43954 TAATTGACGCTCATCGTCCAATTGTTTTCCTGCAAATATCAACCGTTGCTGGTCCTGAGG 44013
|| ||| |||| |||||||||||||| ||||| || | ||||| ||||| | ||
Sbjct 129611 CAAAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGG 129552
Query 44014 TACACCTTCTTTATCTGAAATTTTTTGTTTGACCATAGCAACAGTATCTGCCGGCTCCAC 44073
| |||||||||||| |||||| || || | | | ||||| | ||| || ||
Sbjct 129551 AATTCCTTCTTTATCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGAC 129492
Query 44074 ATCGACCGTAATTGTTTTACCGGTTAAAGTCTTCACAAATATTTGCAT 44121
|| | || || || ||||| |||||||||||||| |||||||||||
Sbjct 129491 CTCTAAAGTGATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354760356478224
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |