Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_005309.1
Length=359853
Score E
Sequences producing significant alignments: (Bits) Value
seq12 255 1e-62
seq25 187 6e-42
seq218 172 1e-37
seq428 163 7e-35
>seq12
Length=2314596
Score = 255 bits (282), Expect = 1e-62
Identities = 610/914 (67%), Gaps = 19/914 (2%)
Strand=Plus/Plus
Query 268682 TTAGTAAATAACCCAGATAGATTTGTGATATTTCCAATACAGCATGGTGATATATGGAGG 268741
|||| || | || ||| || || || |||||||| || || || || || |||
Sbjct 281193 TTAGAGAAAATCCAAGA-AGGTTCGTAATATTTCCTATTCAATATCCAGACATTTGGGAA 281251
Query 268742 ATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGATCTGTCTTATGAC 268801
| |||||| | || | ||||| || ||||| |||||||||||| || ||| | |||
Sbjct 281252 AAGTACAAGGAAGCTGAAGCTTCCTTCTGGACAACAGAAGAAGTAGACCTTTCTAAGGAC 281311
Query 268802 TTAATAGATTGGAAAAATTTAAAACCAGAAGAAAGAAGATTTATATCTTATATTCTTGCG 268861
| | ||| | || || | || ||||| || || || || | |||||
Sbjct 281312 CTTGCCCACTGGGATAAGTTGTCAAATGATGAAAGGCATTTCATTTCACATGTACTTGCC 281371
Query 268862 TTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGAGAAGTTCTGTCAAGAG 268921
|||||||| | |||||| || || || ||||| || ||||||| ||| |||||||
Sbjct 281372 TTTTTTGCTGCATCTGATGGAATTGTAAATGAAAACCTTGTAGAGAGATTCAGTCAAGAA 281431
Query 268922 GTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGCTATAGAAAATATTCAT 268981
||||| | |||| || | || ||||| || ||||| || || || |||||||| |||
Sbjct 281432 GTACAAGTAACTGAGGCTCGTTGCTTTTATGGTTTCCAAATTGCCATTGAAAATATCCAT 281491
Query 268982 TCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAACAACGAAAAGAAAAGA 269041
||||| ||||| ||| | || || ||||||||| ||| || ||| ||||| |
Sbjct 281492 TCAGAAATGTATAGTACTCTCATTGACACTTATATATTTGACC-CA--GAAGAGAAAGAA 281548
Query 269042 CTA-TTTTC--TTCTATGAGAACTATGGACTGTGTGAGaaaaaaaTCTGAATGGGCTCTG 269098
| ||||| | |||| ||| ||| ||||| | || || |||| ||||||||
Sbjct 281549 TTTCTTTTCAATGCTATTGAAACCATGCCTTGTGTTAAGAAGAAGGCTGATTGGGCTCTT 281608
Query 269099 AAATGGATAAACGATAGC---GCGCCTTACGGAGAAAGGTTAGTTGCTTTTGCCGCTGTA 269155
| ||||| | | || || | | | |||| | | ||||| ||||| |||||
Sbjct 281609 CATTGGATCAGCAGTAAGAATGCAACATTCCCAGAACGAGTTGTTGCATTTGCAGCTGTG 281668
Query 269156 GAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGGTTGAAGAAAAGAGGCCTT 269215
||||| || |||||||| || |||||| |||||||||||| | |||||| | || |||
Sbjct 281669 GAAGGAATTTTCTTTTCAGGAAGTTTTGCTGCTATCTTTTGGCTCAAGAAACGGGGTCTT 281728
Query 269216 ATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGACGAAGGTTTACACTGCGAC 269275
||||||||| | || || ||||| || | || | || |||||||| || || ||
Sbjct 281729 ATGCCAGGACTGACATTTTCTAATGAGCTTATTTCTCGCGATGAAGGTTTGCATTGTGAT 281788
Query 269276 TTCGCTTGTTTATTATTTACTAATTATCTTTCACACAAACCTTCTCAAGATAGAGTATAC 269335
|| ||||||||| | ||| | |||| || || ||||| || |||| |||||
Sbjct 281789 TTTGCTTGTTTAATGTTTTC---TTATATTGTTCAAAAACCATCAAAAGAGCGAGTAACA 281845
Query 269336 GA---AATTATAGATTCAGCTGTTTCTGTAGAAACAGAATTTCTAACGGAAGCTCTATCT 269392
|| |||| ||| || ||| | ||| |||||| |||| || ||| | ||
Sbjct 281846 GATATAATTCGCGAT---GCAGTTAAAATTGAACAGGAATTTTTAACTGATGCTTTGCCT 281902
Query 269393 ATCGATCTTATCGGTATGAATAGCAAATCGATGATAGAATATATTAAGTTCGTATCTGAT 269452
| || || ||||||||| ||||| |||| | ||||| | || ||| ||||
Sbjct 281903 GTAAGCCTAATTGGTATGAATTGCAAACTGATGTCTCAGTATATCGAATTTGTAGCTGAC 281962
Query 269453 AGATTGCTGGTGTCTTTAGGGTTTAGTAAAAAATATAACGTTGAAAATCCGTTTAGTTTT 269512
| | | || || || | | ||| | ||||| ||| | ||||||||| |||
Sbjct 281963 CGTCTTTTAGTAGAGTTGGGTTGTGATAAGATTTATAATGTTAAGAATCCGTTTGACTTT 282022
Query 269513 ATGGAGAATATATCATTAGAAGGTAAGGCTAATTTCTTCGAGAAGCGGGTAAGTAACTAT 269572
||| | || || || || || ||| | |||||||| || ||| ||| || | |||
Sbjct 282023 ATGAACAAAATTTCCACTGATGGCAAGACAAATTTCTTTGAAAAGAAAGTAGGTGAATAT 282082
Query 269573 CAGAAAATGGGTGT 269586
|| || || || ||
Sbjct 282083 CAAAAGATTGGAGT 282096
>seq25
Length=1883024
Score = 187 bits (206), Expect = 6e-42
Identities = 163/203 (80%), Gaps = 0/203 (0%)
Strand=Plus/Plus
Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416
||||| || |||||||||||||| ||||||||||| ||||| | || ||||||| |||
Sbjct 1512049 TGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAAAGAGTACGGCCATCTTCTAATTGC 1512108
Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476
|| ||||| ||||||| |||||||||||||||||| || ||||| || || ||||||||
Sbjct 1512109 TTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTC 1512168
Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536
|| ||||||||||| | || || ||||| ||||| || || || || || || |||
Sbjct 1512169 GCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTTTTTCCGGTA 1512228
Query 104537 AGTGTTTTTACAAATATCTGCAT 104559
|| ||||| ||||| || |||||
Sbjct 1512229 AGAGTTTTCACAAAAATTTGCAT 1512251
>seq218
Length=661058
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || |||| ||||| | ||| | ||||||||||||||| |||||||||||||| ||
Sbjct 355995 ATACCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCT 356054
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || |||| || ||||| | ||||| || |||||||| || | |||||||| ||
Sbjct 356055 GAAAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGT 356114
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||| || ||||| || ||||||| ||||| || |||
Sbjct 356115 GGGATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCT 356174
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || || || ||||| |||||||| | |||||| || || || |||||
Sbjct 356175 ACTTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 172 bits (190), Expect = 1e-37
Identities = 176/230 (77%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| ||||| | || ||||| | ||| | || |||||||| ||||||||||| ||
Sbjct 356451 ATTCCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCG 356510
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||| ||||||||||| ||||| |||| |||||| ||||| ||
Sbjct 356511 GAGAGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGT 356570
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| || ||||| |||||||| ||||| || | ||||| |||||
Sbjct 356571 GGAATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCA 356630
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| |||| || || || |||||||| || || || || || || |||||
Sbjct 356631 ACTTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 168 bits (186), Expect = 2e-36
Identities = 176/231 (76%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | | |||| ||| | || |||||||| |||||||| ||||||
Sbjct 356223 ATACCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCA 356282
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| || || | ||| ||||||| || || |||||||||||||| | ||||| || |||
Sbjct 356283 GAAAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGA 356342
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || ||||| || || ||||| || ||||| || ||||| | ||||| || ||
Sbjct 356343 GGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCA 356402
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
|| ||||| || || ||||| |||||||| || |||||||| |||||||||
Sbjct 356403 ACTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCATT 356453
Score = 159 bits (176), Expect = 8e-34
Identities = 174/231 (75%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
|| || ||||| || | | |||| ||| | || ||||||||||| || || || |||
Sbjct 356679 ATACCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCA 356738
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | || ||||| ||||| || || || ||||||||||||| || ||||| || ||
Sbjct 356739 GACAATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGT 356798
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || || |||||||| ||||| || || ||||| || |||| || || ||||||
Sbjct 356799 GGAATACCCTCTTTATCTTGAATTTTAGCCTTTACGTTCTCTATTGTGTCAGACGGTTCT 356858
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCATT 104560
||||| || || || || |||||||| ||||| || ||||| |||||||||
Sbjct 356859 ACCTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCATT 356909
Score = 141 bits (156), Expect = 2e-28
Identities = 140/181 (77%), Gaps = 0/181 (0%)
Strand=Plus/Plus
Query 104369 TCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAA 104428
||||||||||| || || ||||| | |||||||| ||||| | ||| || |||||||||
Sbjct 357271 TCTTTCTGAATGTTGTAATCAGACAATGTTCTACCATCTTCCAATTGCTTACCAGCAAAA 357330
Query 104429 ATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTT 104488
|| | | ||||| || ||||| || |||||||| ||||| ||||| || || ||||||
Sbjct 357331 ATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTT 357390
Query 104489 TCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACA 104548
|| | || || |||||||| || ||||| || || |||||||| ||||| || |||
Sbjct 357391 TCAATTGTGTCTGACGGTTCTACTTCCAGTGTGATTGTTTTACCAGTTAGTGTCTTAACA 357450
Query 104549 A 104549
|
Sbjct 357451 A 357451
Score = 140 bits (154), Expect = 7e-28
Identities = 169/230 (73%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 104330 ATTCCCCCTCTTAGCCTAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCA 104389
||||| ||||| || | | || | ||| | ||| ||||||||||| || || |||
Sbjct 352151 ATTCCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCA 352210
Query 104390 GATAGAGTTCTACCGTCTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGA 104449
|| | ||||||||| ||||| | |||||| || |||||||| | | || || || |||
Sbjct 352211 GACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGA 352270
Query 104450 GGTATTCCTTCTTTATCCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCT 104509
|| || |||||||| ||||| ||||| || || || ||||| | || || ||||||
Sbjct 352271 GGAATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCT 352330
Query 104510 ACCTCTAGTGTAATAGTCTTACCAGTAAGTGTTTTTACAAATATCTGCAT 104559
|| || ||||| || || || ||||| | ||||| ||||| || |||||
Sbjct 352331 ACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
>seq428
Length=160056
Score = 163 bits (180), Expect = 7e-35
Identities = 169/220 (77%), Gaps = 1/220 (0%)
Strand=Plus/Minus
Query 104346 TAAGTACTAGATGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGT 104405
|||| || | ||| ||||| ||||| || || || || || ||||| | ||| | || |
Sbjct 129656 TAAG-ACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCAT 129598
Query 104406 CTTCTAGTTGTTTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTAT 104465
|||| | ||||||||||||||||||||| | ||||| ||||| || |||||||||||||
Sbjct 129597 CTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTAT 129538
Query 104466 CCTGAATCTTTGCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAG 104525
| || || ||||| || |||||||| | |||||| ||||| ||||||| || || |
Sbjct 129537 CTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGG 129478
Query 104526 TCTTACCAGTAAGTGTTTTTACAAATATCTGCATTTTGTG 104565
||||||| || | || || || ||||| ||||| ||||
Sbjct 129477 TCTTACCCGTTAAAGTCTTCACGAATATTTGCATCCTGTG 129438
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1151339567859504
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