Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq301 120 4e-22 >seq301 Length=321246 Score = 120 bits (132), Expect = 4e-22 Identities = 150/201 (75%), Gaps = 6/201 (3%) Strand=Plus/Minus Query 164502 AGGCTGTAAACATATAAAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATT 164561 ||| ||||||||| ||||||| || || | |||| ||||||||| |||||||| || Sbjct 213617 AGGATGTAAACATGTAAAAGGTATATTGCTGTATGGTCCTCCTGGTACTGGTAAAACTTT 213558 Query 164562 AATGGCTCGATGCATTGCTCAAGCTTTTAAATC--GCGACCCGTTAAAATTGTTAATGGT 164619 ||||||||| |||| | || | || | | || || ||||||||||||||| Sbjct 213557 AATGGCTCGTCAAATTGGTAAAATGCTGAATGCCAGAGAACC--AAAAATTGTTAATGGT 213500 Query 164620 CCT-GAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCA 164678 ||| |||| ||| |||| ||||| ||||| |||||||| |||||| ||| || ||| Sbjct 213499 CCTCAAATTCTTG-ACAAGTATGTTGGTGAATCAGAAGCAAATGTTCGAAGATTATTTGC 213441 Query 164679 GGAGGCTGAAGAAGAACAAAA 164699 || || ||||||||| |||| Sbjct 213440 TGAAGCAGAAGAAGAAGAAAA 213420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595842295780800