Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_005906.1
Length=81755
Score E
Sequences producing significant alignments: (Bits) Value
seq45 122 5e-23
seq93 113 2e-20
seq64 109 3e-19
>seq45
Length=1538373
Score = 122 bits (134), Expect = 5e-23
Identities = 78/86 (91%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 11444 AAAAAATCAAATTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGAC 11503
|||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 460472 AAAAAAGCTAATTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGAC 460531
Query 11504 GCTCTRACCAACTGAGCTAATGGGCC 11529
||||| ||||||||||||||||||||
Sbjct 460532 GCTCTAACCAACTGAGCTAATGGGCC 460557
Score = 111 bits (122), Expect = 8e-20
Identities = 69/75 (92%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 951372 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 951431
Query 11515 CTGAGCTAATGGGCC 11529
|||||||||||||||
Sbjct 951432 CTGAGCTAATGGGCC 951446
>seq93
Length=1049888
Score = 113 bits (124), Expect = 2e-20
Identities = 70/76 (92%), Gaps = 0/76 (0%)
Strand=Plus/Minus
Query 11455 TTGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAA 11514
|||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||
Sbjct 544312 TTGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAA 544253
Query 11515 CTGAGCTAATGGGCCG 11530
||||||||||||||||
Sbjct 544252 CTGAGCTAATGGGCCG 544237
>seq64
Length=1089626
Score = 109 bits (120), Expect = 3e-19
Identities = 68/74 (92%), Gaps = 0/74 (0%)
Strand=Plus/Minus
Query 11456 TGGCCCATGAAAGGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAAC 11515
||||||||| |||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 238566 TGGCCCATGGGGGGATCGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTAACCAAC 238507
Query 11516 TGAGCTAATGGGCC 11529
||||||||||||||
Sbjct 238506 TGAGCTAATGGGCC 238493
Lambda K H
0.639 0.410 0.921
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 261478490547088
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |