Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_006549.1
Length=140131
Score E
Sequences producing significant alignments: (Bits) Value
seq25 145 7e-30
seq218 140 3e-28
seq428 122 8e-23
>seq25
Length=1883024
Score = 145 bits (160), Expect = 7e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
|||||||| || || ||||||||||| || || ||||| || || | |||||| ||
Sbjct 1512025 CCTCCTCTTAAACGTAACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAA 1512084
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| || | || || || | || ||||| || || ||||| ||||||
Sbjct 1512085 AGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGA 1512144
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|||||||| ||||| | ||| || ||||| || ||| ||||| | | | || ||
Sbjct 1512145 ATACCTTCCTTGTCTTGAATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACC 1512204
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010
|||| ||||| |||||||| ||||||||||||||||| || ||||||||
Sbjct 1512205 TCAAGGGTGATTGTTTTTCCGGTAAGAGTTTTCACAAAAATTTGCATGCT 1512254
>seq218
Length=661058
Score = 140 bits (154), Expect = 3e-28
Identities = 172/233 (74%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 94777 CACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATC 94836
|| |||||||||||||| | ||||| || | ||| ||||| ||||| | ||||||||
Sbjct 356450 CATTCCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATC 356509
Query 94837 GCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCT 94894
| | || || || ||| ||||| |||||||| |||||||||| || |||||||||
Sbjct 356510 GG--AGAGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCT 356567
Query 94895 GGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGG 94954
|| ||||| ||||||||||| | ||||||||| || || | | || || | |
Sbjct 356568 GGTGGAATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGT 356627
Query 94955 TCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
|| || || | ||||| ||||| ||||| || || ||||| || || |||||
Sbjct 356628 TCAACTTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 129 bits (142), Expect = 5e-25
Identities = 172/239 (72%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 94769 AAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACG 94828
||| ||| || |||||||| | ||||| || || || | || ||||| || || | |
Sbjct 356670 AAAATTTGCATACCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATG 356729
Query 94829 TTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGC 94888
|| ||||| || || | ||| || ||||| || || |||| |||||||||||
Sbjct 356730 TTGTAATCAGACAATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGT 356789
Query 94889 TGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCA 94948
|| ||||| |||||||| ||||| || | |||||| ||||| ||| | | ||||||
Sbjct 356790 TGGTCTGGTGGAATACCCTCTTTATCTTGAATTTTAGCCTTTACGTTCTCTATTGTGTCA 356849
Query 94949 GCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || |||| ||||| ||||| ||||| || || || ||||| ||||||||
Sbjct 356850 GACGGTTCTACCTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908
Score = 122 bits (134), Expect = 8e-23
Identities = 172/242 (71%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827
|||| | | || ||| ||||| | || || ||||| || | ||| || || || |
Sbjct 352141 AAAAATCTGCATTCCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAAT 352200
Query 94828 GTTATAATCGCTCATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTG 94887
||| ||||| || ||| | ||| |||| ||||| ||| |||| || || | |||
Sbjct 352201 GTTGTAATCAGACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTG 352260
Query 94888 CTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTC 94947
||| ||||||||||||||||||||||| | || || ||||| ||| | | |||||
Sbjct 352261 CTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTC 352320
Query 94948 AGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| | || || || | ||||||||||||||||| | ||||| ||||| || |||||
Sbjct 352321 TGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Query 95008 GC 95009
||
Sbjct 352381 GC 352382
Score = 120 bits (132), Expect = 3e-22
Identities = 170/237 (72%), Gaps = 4/237 (2%)
Strand=Plus/Plus
Query 94773 TTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTAT 94832
||| || || ||||| | ||||| || || |||| ||| ||||| ||||| | || |
Sbjct 356218 TTTGCATACCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGT 356277
Query 94833 AATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTG 94890
| || | || || || ||| || | ||| || || |||| |||| | ||| ||
Sbjct 356278 AGTCAG--AAAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTG 356335
Query 94891 ATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGC 94950
||||||||||||||||| ||||| | |||||| || || ||| | | || ||||
Sbjct 356336 GTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGA 356395
Query 94951 GTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
| || || || | |||||||| |||||||||||||| || ||||||||||||||
Sbjct 356396 TGGCTCAACTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452
Score = 116 bits (128), Expect = 3e-21
Identities = 156/215 (73%), Gaps = 4/215 (2%)
Strand=Plus/Plus
Query 94795 CAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGG--AA 94852
||| ||||| || || ||||||||||| || | ||||||| || | || ||| | |
Sbjct 356012 CAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAAT--CTGAAAGGGTTCGTCCA 356069
Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912
|| |||| |||||| ||| |||| || | | ||| |||||||| || |||||||| |||
Sbjct 356070 TCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCCTTG 356129
Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATG 94972
|| | |||||| || |||||| | | || |||| | || || |||| || ||
Sbjct 356130 TCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACTTCAAGGGTTATA 356189
Query 94973 GTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007
||||| ||||| | ||||| || ||||| |||||
Sbjct 356190 GTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 84.2 bits (92), Expect = 2e-11
Identities = 97/131 (74%), Gaps = 0/131 (0%)
Strand=Plus/Plus
Query 94877 ATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCG 94936
|| || | ||| || ||||||||||||||||||||||| | || || ||||| ||
Sbjct 352022 ATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTT 352081
Query 94937 CCGACAGTGTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACA 94996
| | ||||| | | || || || | ||||||||||||||||| || || || |||
Sbjct 352082 TCAATTGTGTCTGACGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAGTGTCTTAACA 352141
Query 94997 AAGATCTGCAT 95007
|| ||||||||
Sbjct 352142 AAAATCTGCAT 352152
Score = 82.4 bits (90), Expect = 7e-11
Identities = 92/123 (75%), Gaps = 0/123 (0%)
Strand=Plus/Plus
Query 94885 TTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGT 94944
||| || ||||||||||||||||||||||| | || || ||||| ||| | | ||
Sbjct 357111 TTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTAACGTTTTCAATTGT 357170
Query 94945 GTCAGCGTGGTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTG 95004
||| | | || || || | ||||||||||||||||| | ||||| ||||| || ||
Sbjct 357171 GTCTGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTG 357230
Query 95005 CAT 95007
|||
Sbjct 357231 CAT 357233
>seq428
Length=160056
Score = 122 bits (134), Expect = 8e-23
Identities = 165/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Minus
Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840
||||| ||||||| || ||||| ||||| || ||||||||||| | ||| ||||| |
Sbjct 129670 CCTCCCCTCAATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGAC 129611
Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900
| ||| | ||| |||| |||||||| |||| |||| | ||| || || || |||
Sbjct 129610 AAAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGA 129551
Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960
|| |||||||| || | ||||||||||| || ||| || || | | |||||
Sbjct 129550 ATTCCTTCTTTATCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACC 129491
Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010
|| | |||||||| || || || | ||| ||||| || || ||||| ||
Sbjct 129490 TCTAAAGTGATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCATCCT 129441
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 448268852683680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |