Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_006633.1 Length=27346 Score E Sequences producing significant alignments: (Bits) Value seq91 116 6e-22 seq116 104 4e-18 seq67 95.1 2e-15 >seq91 Length=1022078 Score = 116 bits (128), Expect = 6e-22 Identities = 138/185 (75%), Gaps = 4/185 (2%) Strand=Plus/Plus Query 25285 TTAAGGTAGTAC-TAC---CGGTATTAGAATTGACTTTCAGAATTTAATGAAATTTGGCA 25340 |||||||||||| ||| |||||||||| || ||||||||||||||||| |||||| Sbjct 909990 TTAAGGTAGTACCTACTCTCGGTATTAGAGTTATTGTTCAGAATTTAATGAAACTTGGCA 910049 Query 25341 TATTGGTACTTTATAATATCATAATTAAGCAGTAAAATTTTTGAAAGCCAACCAAGTCTT 25400 ||||||| | |||||||| ||||| || |||| |||||||| || | | || | Sbjct 910050 TATTGGTCCATTATAATAAGATAATGAACCAGTTAAATTTTTAAAGAGCTGCAGAGAATC 910109 Query 25401 GaaaaaaaGATATTAATATCTACATATTTTTGCTTTTAACATTGACCTTTATGGATAATC 25460 |||| |||||||||||| | ||||| || |||| | |||| ||||| |||| Sbjct 910110 AAAAACAAGATATTAATAAAAAATAATTTTCGCCTTTACCGTTGATTCTTATGAGAAATC 910169 Query 25461 ATAGA 25465 | ||| Sbjct 910170 ACAGA 910174 >seq116 Length=807365 Score = 104 bits (114), Expect = 4e-18 Identities = 132/181 (73%), Gaps = 8/181 (4%) Strand=Plus/Plus Query 25285 TTAAGGTAGTACTACCGGTATTAGAATTGACTTTCAGAATTTAATGAAATTTGGCATATT 25344 ||||||||||||| |||||||| || ||||||||||||||||| |||||||||| Sbjct 592056 TTAAGGTAGTACTCTTTGTATTAGAGTTATTGTTCAGAATTTAATGAAACTTGGCATATT 592115 Query 25345 GGTACTTTATAATATCATAATTAAGCAGTAAAATTTTTGAAAGCCAACCAAGTCTTGaaa 25404 ||| | ||| |||| ||||| || |||| ||| |||| | | ||||| || Sbjct 592116 GGTCCATTAGAATAAGATAATGAACCAGTTAAAGTTTT-ACACAGAACCA-------GAA 592167 Query 25405 aaaaGATATTAATATCTACATATTTTTGCTTTTAACATTGACCTTTATGGATAATCATAG 25464 |||| ||||||||| | ||||| | |||| |||||| | ||||| ||||| || Sbjct 592168 AAAATATATTAATAAAAAATAATTTTCGGCTTTACCATTGATCCTTATGAGAAATCACAG 592227 Query 25465 A 25465 | Sbjct 592228 A 592228 >seq67 Length=1143706 Score = 95.1 bits (104), Expect = 2e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 25294 TACTACCGGTATTAGAATTGACTTTCAGAATTTAATGAAATTTGGCATATTGGTACTTTA 25353 |||| ||| |||| | || |||| |||||||||||||||||||||||||| | ||| Sbjct 440104 TACTCTCGGCATTATAGTTATTGTTCAAAATTTAATGAAATTTGGCATATTGGTCCATTA 440045 Query 25354 TAATATCATAATTAAGCAGTAAAATTTTTGAAAGCCAACCAAGTCTTGaaaaaaaGATAT 25413 ||||| ||||| || |||| |||||||| ||| | || || ||| ||||||| Sbjct 440044 TAATAAGATAATGAACCAGTTAAATTTTTAAAAAGCTGCCGAGAACCAGAAAGAAGATAT 439985 Query 25414 TAATATCTACATATTTTTGCTTTTAACATTGA 25445 ||||| | ||||| || | || |||||| Sbjct 439984 TAATAAAAAATAATTTTCGCCTATACCATTGA 439953 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 87384770393196