Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_006633.1
Length=27346
Score E
Sequences producing significant alignments: (Bits) Value
seq91 116 6e-22
seq116 104 4e-18
seq67 95.1 2e-15
>seq91
Length=1022078
Score = 116 bits (128), Expect = 6e-22
Identities = 138/185 (75%), Gaps = 4/185 (2%)
Strand=Plus/Plus
Query 25285 TTAAGGTAGTAC-TAC---CGGTATTAGAATTGACTTTCAGAATTTAATGAAATTTGGCA 25340
|||||||||||| ||| |||||||||| || ||||||||||||||||| ||||||
Sbjct 909990 TTAAGGTAGTACCTACTCTCGGTATTAGAGTTATTGTTCAGAATTTAATGAAACTTGGCA 910049
Query 25341 TATTGGTACTTTATAATATCATAATTAAGCAGTAAAATTTTTGAAAGCCAACCAAGTCTT 25400
||||||| | |||||||| ||||| || |||| |||||||| || | | || |
Sbjct 910050 TATTGGTCCATTATAATAAGATAATGAACCAGTTAAATTTTTAAAGAGCTGCAGAGAATC 910109
Query 25401 GaaaaaaaGATATTAATATCTACATATTTTTGCTTTTAACATTGACCTTTATGGATAATC 25460
|||| |||||||||||| | ||||| || |||| | |||| ||||| ||||
Sbjct 910110 AAAAACAAGATATTAATAAAAAATAATTTTCGCCTTTACCGTTGATTCTTATGAGAAATC 910169
Query 25461 ATAGA 25465
| |||
Sbjct 910170 ACAGA 910174
>seq116
Length=807365
Score = 104 bits (114), Expect = 4e-18
Identities = 132/181 (73%), Gaps = 8/181 (4%)
Strand=Plus/Plus
Query 25285 TTAAGGTAGTACTACCGGTATTAGAATTGACTTTCAGAATTTAATGAAATTTGGCATATT 25344
||||||||||||| |||||||| || ||||||||||||||||| ||||||||||
Sbjct 592056 TTAAGGTAGTACTCTTTGTATTAGAGTTATTGTTCAGAATTTAATGAAACTTGGCATATT 592115
Query 25345 GGTACTTTATAATATCATAATTAAGCAGTAAAATTTTTGAAAGCCAACCAAGTCTTGaaa 25404
||| | ||| |||| ||||| || |||| ||| |||| | | ||||| ||
Sbjct 592116 GGTCCATTAGAATAAGATAATGAACCAGTTAAAGTTTT-ACACAGAACCA-------GAA 592167
Query 25405 aaaaGATATTAATATCTACATATTTTTGCTTTTAACATTGACCTTTATGGATAATCATAG 25464
|||| ||||||||| | ||||| | |||| |||||| | ||||| ||||| ||
Sbjct 592168 AAAATATATTAATAAAAAATAATTTTCGGCTTTACCATTGATCCTTATGAGAAATCACAG 592227
Query 25465 A 25465
|
Sbjct 592228 A 592228
>seq67
Length=1143706
Score = 95.1 bits (104), Expect = 2e-15
Identities = 112/152 (74%), Gaps = 0/152 (0%)
Strand=Plus/Minus
Query 25294 TACTACCGGTATTAGAATTGACTTTCAGAATTTAATGAAATTTGGCATATTGGTACTTTA 25353
|||| ||| |||| | || |||| |||||||||||||||||||||||||| | |||
Sbjct 440104 TACTCTCGGCATTATAGTTATTGTTCAAAATTTAATGAAATTTGGCATATTGGTCCATTA 440045
Query 25354 TAATATCATAATTAAGCAGTAAAATTTTTGAAAGCCAACCAAGTCTTGaaaaaaaGATAT 25413
||||| ||||| || |||| |||||||| ||| | || || ||| |||||||
Sbjct 440044 TAATAAGATAATGAACCAGTTAAATTTTTAAAAAGCTGCCGAGAACCAGAAAGAAGATAT 439985
Query 25414 TAATATCTACATATTTTTGCTTTTAACATTGA 25445
||||| | ||||| || | || ||||||
Sbjct 439984 TAATAAAAAATAATTTTCGCCTATACCATTGA 439953
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 87384770393196
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |