Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_006647.1
Length=8785
Score E
Sequences producing significant alignments: (Bits) Value
seq464 95.1 7e-16
seq45 93.3 2e-15
seq13 91.5 8e-15
seq356 84.2 1e-12
seq146 82.4 4e-12
seq20 82.4 4e-12
seq6 82.4 4e-12
seq47 80.6 1e-11
seq102 78.8 5e-11
seq51 78.8 5e-11
>seq464
Length=182750
Score = 95.1 bits (104), Expect = 7e-16
Identities = 93/120 (78%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134
|||||| ||||| || ||||||| ||||||||||||| |||||||||| | ||| ||
Sbjct 29060 AGCTTCTTATGATCTCAAAACGTTGAGATCTGATGAATACTCGATTTTCGAAAATTGGTC 29119
Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194
|||| ||||||||||| ||||| ||||| |||| |||||| |||| |||||
Sbjct 29120 AGAAATCAATAACTTCCTAATTTTAAAAAATTAGTGGTTTTTATAGCGGAAAGTCAAAAA 29179
>seq45
Length=1538373
Score = 93.3 bits (102), Expect = 2e-15
Identities = 75/91 (82%), Gaps = 0/91 (0%)
Strand=Plus/Plus
Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134
|||||||||||| || |||||||| |||||||||||| | |||||||| | ||| |||
Sbjct 1023889 AGCTTCCTATGATCTCAAAACGTCAAGATCTGATGAATATTCGATTTTGGAAAATCGGCC 1023948
Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAAT 1165
||||| |||| | ||||| ||||| |||||
Sbjct 1023949 TGAAATCAATCAATTCCCAATTTTGAAAAAT 1023979
>seq13
Length=2375419
Score = 91.5 bits (100), Expect = 8e-15
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Plus
Query 1076 GCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGT 1135
||||||||||| || ||||||||||||||| ||||| | | |||||| | ||| ||| |
Sbjct 572382 GCTTCCTATGAACTCAAAACGTCGAGATCTAATGAATATTTGATTTTCGTAAATCGGCCT 572441
Query 1136 GAAAACAATAACTTCCCGATTTTTGAAAAT 1165
|||| ||||||||||| ||||| |||||
Sbjct 572442 GAAATCAATAACTTCCTAATTTTGAAAAAT 572471
>seq356
Length=319721
Score = 84.2 bits (92), Expect = 1e-12
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134
|||||||||||| | |||||||||| |||||||||| |||| ||||||| ||| |
Sbjct 36063 AGCTTCCTATGATTTCAAAACGTCGATATCTGATGAATACTCAATTTTTGAAAATTGACC 36004
Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAAT 1165
|||| ||||||||||| ||||| |||||
Sbjct 36003 CGAAATCAATAACTTCCTAATTTTGAAAAAT 35973
Score = 84.2 bits (92), Expect = 1e-12
Identities = 73/91 (80%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134
|||||||||||| | |||||||||| |||||||||| |||| ||||||| ||| |
Sbjct 42923 AGCTTCCTATGATTTCAAAACGTCGATATCTGATGAATACTCAATTTTTGAAAATTGACC 42864
Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAAT 1165
|||| ||||||||||| ||||| |||||
Sbjct 42863 CGAAATCAATAACTTCCTAATTTTGAAAAAT 42833
>seq146
Length=830546
Score = 82.4 bits (90), Expect = 4e-12
Identities = 93/124 (75%), Gaps = 2/124 (2%)
Strand=Plus/Plus
Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAA--CTCGATTTTTGCAAAACGG 1132
|||| | | ||| || ||||||||||||||||||||| | ||||||||| | ||| ||
Sbjct 725658 AGCTACTTGTGATCTCAAAACGTCGAGATCTGATGAATACTCTCGATTTTCGAAAATCGC 725717
Query 1133 GGTGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAA 1192
||||| |||| |||||| ||||| ||||| |||| | |||| |||| |||
Sbjct 725718 TCTGAAATTAATATCTTCCCAATTTTCAAAAATGAGTGGTTTTTATGGCGGAAAGTCAAA 725777
Query 1193 AATT 1196
||||
Sbjct 725778 AATT 725781
>seq20
Length=2007964
Score = 82.4 bits (90), Expect = 4e-12
Identities = 91/120 (76%), Gaps = 1/120 (1%)
Strand=Plus/Minus
Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134
|||||| | ||| ||||||| || ||||||||||||| | || ||||| | ||| |
Sbjct 1129192 AGCTTCTTGTGATCTTAAAAGGTTGAGATCTGATGAATATTCAATTTTCGAAAATCAACC 1129133
Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194
||||| ||||||||||| ||||| ||||| | |||| ||| || ||||||||||
Sbjct 1129132 TGAAATCAATAACTTCCTAATTTTGAAAAATTTGTGGTTTTTATAG-GGAAAGTTAAAAA 1129074
>seq6
Length=2606240
Score = 82.4 bits (90), Expect = 4e-12
Identities = 68/83 (82%), Gaps = 0/83 (0%)
Strand=Plus/Plus
Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134
||||| |||||| || ||||||||||||||||||||| ||| ||||| | ||| ||
Sbjct 784131 AGCTTTCTATGATCTCAAAACGTCGAGATCTGATGAATACTGCATTTTCGAAAATGGGCC 784190
Query 1135 TGAAAACAATAACTTCCCGATTT 1157
||||| ||||||||||| ||||
Sbjct 784191 TGAAATTAATAACTTCCCAATTT 784213
>seq47
Length=1346888
Score = 80.6 bits (88), Expect = 1e-11
Identities = 69/84 (82%), Gaps = 1/84 (1%)
Strand=Plus/Minus
Query 1082 TATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGTGAAAAC 1141
||||| ||||||||||| |||| ||||||| |||||||||| | || | | ||||| |
Sbjct 1121069 TATGAACTTAAAACGTCAAGATGTGATGAATACTCGATTTTCG-AATATCGCTTGAAATC 1121011
Query 1142 AATAACTTCCCGATTTTTGAAAAT 1165
||||||||||| ||||| |||||
Sbjct 1121010 AATAACTTCCCAATTTTGAAAAAT 1120987
>seq102
Length=848712
Score = 78.8 bits (86), Expect = 5e-11
Identities = 85/114 (75%), Gaps = 8/114 (7%)
Strand=Plus/Plus
Query 1081 CTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGTGAAAA 1140
|||||| |||||||||| |||||||||||| ||||||||| ||| |||||
Sbjct 465163 CTATGATTTTAAAACGTCCAGATCTGATGAATACTCGATTT--------CGGCTTGAAAT 465214
Query 1141 CAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194
||||||||||| ||||| ||||| |||| |||||| |||| |||||
Sbjct 465215 CAATAACTTCCTAATTTTGAAAAATAAGTGGTTTTTATAGCGGAAAGTCAAAAA 465268
>seq51
Length=1222316
Score = 78.8 bits (86), Expect = 5e-11
Identities = 92/123 (75%), Gaps = 1/123 (1%)
Strand=Plus/Plus
Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134
|||||||||||| |||||||||| |||||||||| |||||||||| | || ||
Sbjct 162558 AGCTTCCTATGATTCCAAAACGTCGAAATCTGATGAATACTCGATTTTCGAAAGTCGACC 162617
Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTT-AAAA 1193
| ||| |||||||||||| | || ||| || | || |||||| ||||| ||||
Sbjct 162618 TTAAATCAATAACTTCCCAGTATTAGAATATTAATGGTATTTGTAGCGGCAAGTTCAAAA 162677
Query 1194 ATT 1196
|||
Sbjct 162678 ATT 162680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 27995543923568
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |