Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_006647.1 Length=8785 Score E Sequences producing significant alignments: (Bits) Value seq464 95.1 7e-16 seq45 93.3 2e-15 seq13 91.5 8e-15 seq356 84.2 1e-12 seq146 82.4 4e-12 seq20 82.4 4e-12 seq6 82.4 4e-12 seq47 80.6 1e-11 seq102 78.8 5e-11 seq51 78.8 5e-11 >seq464 Length=182750 Score = 95.1 bits (104), Expect = 7e-16 Identities = 93/120 (78%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||| ||||| || ||||||| ||||||||||||| |||||||||| | ||| || Sbjct 29060 AGCTTCTTATGATCTCAAAACGTTGAGATCTGATGAATACTCGATTTTCGAAAATTGGTC 29119 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 |||| ||||||||||| ||||| ||||| |||| |||||| |||| ||||| Sbjct 29120 AGAAATCAATAACTTCCTAATTTTAAAAAATTAGTGGTTTTTATAGCGGAAAGTCAAAAA 29179 >seq45 Length=1538373 Score = 93.3 bits (102), Expect = 2e-15 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| || |||||||| |||||||||||| | |||||||| | ||| ||| Sbjct 1023889 AGCTTCCTATGATCTCAAAACGTCAAGATCTGATGAATATTCGATTTTGGAAAATCGGCC 1023948 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAAT 1165 ||||| |||| | ||||| ||||| ||||| Sbjct 1023949 TGAAATCAATCAATTCCCAATTTTGAAAAAT 1023979 >seq13 Length=2375419 Score = 91.5 bits (100), Expect = 8e-15 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 1076 GCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGT 1135 ||||||||||| || ||||||||||||||| ||||| | | |||||| | ||| ||| | Sbjct 572382 GCTTCCTATGAACTCAAAACGTCGAGATCTAATGAATATTTGATTTTCGTAAATCGGCCT 572441 Query 1136 GAAAACAATAACTTCCCGATTTTTGAAAAT 1165 |||| ||||||||||| ||||| ||||| Sbjct 572442 GAAATCAATAACTTCCTAATTTTGAAAAAT 572471 >seq356 Length=319721 Score = 84.2 bits (92), Expect = 1e-12 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| | |||||||||| |||||||||| |||| ||||||| ||| | Sbjct 36063 AGCTTCCTATGATTTCAAAACGTCGATATCTGATGAATACTCAATTTTTGAAAATTGACC 36004 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAAT 1165 |||| ||||||||||| ||||| ||||| Sbjct 36003 CGAAATCAATAACTTCCTAATTTTGAAAAAT 35973 Score = 84.2 bits (92), Expect = 1e-12 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| | |||||||||| |||||||||| |||| ||||||| ||| | Sbjct 42923 AGCTTCCTATGATTTCAAAACGTCGATATCTGATGAATACTCAATTTTTGAAAATTGACC 42864 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAAT 1165 |||| ||||||||||| ||||| ||||| Sbjct 42863 CGAAATCAATAACTTCCTAATTTTGAAAAAT 42833 >seq146 Length=830546 Score = 82.4 bits (90), Expect = 4e-12 Identities = 93/124 (75%), Gaps = 2/124 (2%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAA--CTCGATTTTTGCAAAACGG 1132 |||| | | ||| || ||||||||||||||||||||| | ||||||||| | ||| || Sbjct 725658 AGCTACTTGTGATCTCAAAACGTCGAGATCTGATGAATACTCTCGATTTTCGAAAATCGC 725717 Query 1133 GGTGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAA 1192 ||||| |||| |||||| ||||| ||||| |||| | |||| |||| ||| Sbjct 725718 TCTGAAATTAATATCTTCCCAATTTTCAAAAATGAGTGGTTTTTATGGCGGAAAGTCAAA 725777 Query 1193 AATT 1196 |||| Sbjct 725778 AATT 725781 >seq20 Length=2007964 Score = 82.4 bits (90), Expect = 4e-12 Identities = 91/120 (76%), Gaps = 1/120 (1%) Strand=Plus/Minus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||| | ||| ||||||| || ||||||||||||| | || ||||| | ||| | Sbjct 1129192 AGCTTCTTGTGATCTTAAAAGGTTGAGATCTGATGAATATTCAATTTTCGAAAATCAACC 1129133 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 ||||| ||||||||||| ||||| ||||| | |||| ||| || |||||||||| Sbjct 1129132 TGAAATCAATAACTTCCTAATTTTGAAAAATTTGTGGTTTTTATAG-GGAAAGTTAAAAA 1129074 >seq6 Length=2606240 Score = 82.4 bits (90), Expect = 4e-12 Identities = 68/83 (82%), Gaps = 0/83 (0%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 ||||| |||||| || ||||||||||||||||||||| ||| ||||| | ||| || Sbjct 784131 AGCTTTCTATGATCTCAAAACGTCGAGATCTGATGAATACTGCATTTTCGAAAATGGGCC 784190 Query 1135 TGAAAACAATAACTTCCCGATTT 1157 ||||| ||||||||||| |||| Sbjct 784191 TGAAATTAATAACTTCCCAATTT 784213 >seq47 Length=1346888 Score = 80.6 bits (88), Expect = 1e-11 Identities = 69/84 (82%), Gaps = 1/84 (1%) Strand=Plus/Minus Query 1082 TATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGTGAAAAC 1141 ||||| ||||||||||| |||| ||||||| |||||||||| | || | | ||||| | Sbjct 1121069 TATGAACTTAAAACGTCAAGATGTGATGAATACTCGATTTTCG-AATATCGCTTGAAATC 1121011 Query 1142 AATAACTTCCCGATTTTTGAAAAT 1165 ||||||||||| ||||| ||||| Sbjct 1121010 AATAACTTCCCAATTTTGAAAAAT 1120987 >seq102 Length=848712 Score = 78.8 bits (86), Expect = 5e-11 Identities = 85/114 (75%), Gaps = 8/114 (7%) Strand=Plus/Plus Query 1081 CTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGGTGAAAA 1140 |||||| |||||||||| |||||||||||| ||||||||| ||| ||||| Sbjct 465163 CTATGATTTTAAAACGTCCAGATCTGATGAATACTCGATTT--------CGGCTTGAAAT 465214 Query 1141 CAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTTAAAAA 1194 ||||||||||| ||||| ||||| |||| |||||| |||| ||||| Sbjct 465215 CAATAACTTCCTAATTTTGAAAAATAAGTGGTTTTTATAGCGGAAAGTCAAAAA 465268 >seq51 Length=1222316 Score = 78.8 bits (86), Expect = 5e-11 Identities = 92/123 (75%), Gaps = 1/123 (1%) Strand=Plus/Plus Query 1075 AGCTTCCTATGACCTTAAAACGTCGAGATCTGATGAAAACTCGATTTTTGCAAAACGGGG 1134 |||||||||||| |||||||||| |||||||||| |||||||||| | || || Sbjct 162558 AGCTTCCTATGATTCCAAAACGTCGAAATCTGATGAATACTCGATTTTCGAAAGTCGACC 162617 Query 1135 TGAAAACAATAACTTCCCGATTTTTGAAAATCTTCAATTTTCTTAGCGGGAAGTT-AAAA 1193 | ||| |||||||||||| | || ||| || | || |||||| ||||| |||| Sbjct 162618 TTAAATCAATAACTTCCCAGTATTAGAATATTAATGGTATTTGTAGCGGCAAGTTCAAAA 162677 Query 1194 ATT 1196 ||| Sbjct 162678 ATT 162680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 27995543923568