Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_006651.1
Length=19161
Score E
Sequences producing significant alignments: (Bits) Value
seq43 82.4 9e-12
>seq43
Length=1355163
Score = 82.4 bits (90), Expect = 9e-12
Identities = 95/127 (75%), Gaps = 7/127 (6%)
Strand=Plus/Plus
Query 7916 TTTATTTTTCACTATTTCAATCAGTGAGTTTTCACTATTTTTTAGTAGTATACTTATAAC 7975
||||||||| || | |||| || | | ||||||| ||| ||| ||| ||||||
Sbjct 1085945 TTTATTTTTTACCAATTCA----GTTAATATTCACTAGTTTGCAGTGGTACTATTATAAT 1086000
Query 7976 TGTGACAATGAGTGAA---TATGTACTGCAGATTAGTGAAAATCCACTATTTTATTTTTA 8032
||||| |||| ||| ||| | |||| |||||| ||||||||||| || |||||||
Sbjct 1086001 TGTGAAGATGATTGACCATTATTAATTGCAAATTAGTAAAAATCCACTAATTAATTTTTA 1086060
Query 8033 GAGAGTA 8039
|||||||
Sbjct 1086061 GAGAGTA 1086067
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 61193978139056
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |