Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_006659.1 Length=41573 Score E Sequences producing significant alignments: (Bits) Value seq464 86.0 2e-12 seq45 84.2 6e-12 seq13 82.4 2e-11 >seq464 Length=182750 Score = 86.0 bits (94), Expect = 2e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 |||||| |||||||| ||||||| ||||||||||| | |||||||||| | || || Sbjct 29060 AGCTTCTTATGATCTCAAAACGTTGAGATCTGATGAATACTCGATTTTCGAAAATTGGTC 29119 Query 17820 TAAAACCAATAACTTCCCGATTTTCGAAAATCTTCAAtttttttAGCGGGAAGGTAAAAA 17879 ||| ||||||||||| ||||| ||||| ||||| |||||| ||| ||||| Sbjct 29120 AGAAATCAATAACTTCCTAATTTTAAAAAATTAGTGGTTTTTATAGCGGAAAGTCAAAAA 29179 >seq45 Length=1538373 Score = 84.2 bits (92), Expect = 6e-12 Identities = 73/91 (80%), Gaps = 0/91 (0%) Strand=Plus/Plus Query 17760 AGCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGG 17819 ||||||||||||||| |||||||| |||||||||| | | |||||||| | || ||| Sbjct 1023889 AGCTTCCTATGATCTCAAAACGTCAAGATCTGATGAATATTCGATTTTGGAAAATCGGCC 1023948 Query 17820 TAAAACCAATAACTTCCCGATTTTCGAAAAT 17850 | ||| |||| | ||||| ||||| ||||| Sbjct 1023949 TGAAATCAATCAATTCCCAATTTTGAAAAAT 1023979 >seq13 Length=2375419 Score = 82.4 bits (90), Expect = 2e-11 Identities = 72/90 (80%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 17761 GCTTCCTATGATCTTAAAACGTCGAGATCTGATGTAAACTCGATTTTTGTTAAACGGGGT 17820 ||||||||||| || ||||||||||||||| ||| | | | |||||| || || ||| | Sbjct 572382 GCTTCCTATGAACTCAAAACGTCGAGATCTAATGAATATTTGATTTTCGTAAATCGGCCT 572441 Query 17821 AAAACCAATAACTTCCCGATTTTCGAAAAT 17850 ||| ||||||||||| ||||| ||||| Sbjct 572442 GAAATCAATAACTTCCTAATTTTGAAAAAT 572471 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 132905705619960