Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_006883.2
Length=252401
Score E
Sequences producing significant alignments: (Bits) Value
seq296 93.3 7e-14
>seq296
Length=775295
Score = 93.3 bits (102), Expect = 7e-14
Identities = 121/160 (76%), Gaps = 8/160 (5%)
Strand=Plus/Minus
Query 193946 TGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTGTAACTCGTAAGAT 194005
||||||||| |||||||||||| ||||||||| || || ||||| || || | || ||
Sbjct 226466 TGGTATTCTTTTCAATCACGAAAGTCCAAGAAGGGGAGAAACATTCGTTACCAGGAAAAT 226407
Query 194006 TA-CACA-AGGTTTATCTAAGATCTCTGTTGGATT-ACAGAAGAT-TCTTTATCTTGGTA 194061
| || | ||||| ||||| || | | || || ||||| || || | ||| ||||
Sbjct 226406 AACCAGAGAGGTT--TCTAAAATACATTTAGGTTTGTCAGAAAATGTCGT--TCTGGGTA 226351
Query 194062 ATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTA 194101
|||| || |||| || ||||||||||| |||||||||||
Sbjct 226350 ATCTCGATTCTAAAAGAGATTGGGGACATGCAAAGGATTA 226311
Score = 84.2 bits (92), Expect = 4e-11
Identities = 164/240 (68%), Gaps = 2/240 (1%)
Strand=Plus/Minus
Query 193639 AACCTGCTGAGATCTATAATCTTGGTGCTCAAAGTCATGTTAAAGTTTCCTTTGAGATGC 193698
|||| |||| || |||||| | | ||| ||||| |||||||||||||| ||||| ||
Sbjct 38608 AACCCACTGAAATTTATAATTTAGCTGCACAAAGCCATGTTAAAGTTTCTTTTGACTTGA 38549
Query 193699 CAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGTTCGTA 193758
|||||||| | | ||||| ||| | || || || ||| | | || || | | |
Sbjct 38548 GTGAGTATACAGCAGAAGTTGACGCTATCGGCACACTCAGATTGTTGGATGCTATCAGAA 38489
Query 193759 TGTTGGGAATGGAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGTATGGTG 193818
| ||| |||| || | || | ||||| |||||||| || |||| |||
Sbjct 38488 CATGTGGATTGGAAAAGCAGGTAAAATTTTATCAAGCATCTACTTCAGAGTTGTACGGTA 38429
Query 193819 GTGTTCTAGGCACT-CCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTTATGGT 193877
|| | ||| | | |||| |||||||| ||||| ||| |||| | || |||||||||
Sbjct 38428 AAGTAC-AGGAAATACCACAGTCAGAAACTACACCGTTTTATCCCAGGTCACCTTATGGT 38370
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 807514943373280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |