Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq12 284 1e-71 >seq12 Length=2314596 Score = 284 bits (314), Expect = 1e-71 Identities = 596/888 (67%), Gaps = 6/888 (1%) Strand=Plus/Minus Query 21178 TCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGA 21237 ||| || |||||||| |||| ||| | ||||| || ||||||||||| || || || Sbjct 282094 TCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTGGA 282035 Query 21238 TATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTC 21297 || | |||||| ||||| ||||| | | ||| | || |||| |||||||| || Sbjct 282034 AATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAACTC 281975 Query 21298 TGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACC 21357 | ||| | | || ||||||||||| ||||| ||| |||| | || ||||||||||| Sbjct 281974 TACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATACC 281915 Query 21358 GATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAAC 21417 || | ||||||| | ||| | || ||||| | ||| || || || || Sbjct 281914 AATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCGCG 281855 Query 21418 AATTATATTTATTATCCTAGATGTACT-AGGGGGATACAATAAT-TGTTTAAACATCAAA 21475 |||||||| | ||| || | | | | | || | || ||| | |||||| ||| Sbjct 281854 AATTATATCTGTTA--CTCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACATTAAA 281797 Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535 || |||||||||||||||||||||||||| | | || | |||||||||||||| | Sbjct 281796 CAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCAGT 281737 Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAA 21595 || ||||| | || | || || | |||||| || | ||||| ||||||||||||| Sbjct 281736 CCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGAAA 281677 Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG-ATTCTTTATCCAA 21654 || || || || || ||||||||||| | |||||| | |||| | |||||| | | Sbjct 281676 ATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTGC-T 281618 Query 21655 TATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTT 21714 ||||| | ||||| | ||||| | |||| |||| || || |||||||| || Sbjct 281617 GATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCATT 281558 Query 21715 TAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACAT 21774 |||||| | ||| || ||| || ||| ||||||||| Sbjct 281557 GAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATACAT 281498 Query 21775 TTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACA 21834 ||| ||||| |||||||| || || || || || || ||||| || | ||||| | Sbjct 281497 TTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTTAC 281438 Query 21835 TTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGC 21894 ||| || || | |||| | | | |||||||||||| ||||||||| || || Sbjct 281437 TTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCAGC 281378 Query 21895 AAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAATC 21954 |||||| || | || || | || |||| | ||| | || || || || | ||| | Sbjct 281377 AAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAGTG 281318 Query 21955 TAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTT 22014 | || || || | ||||||||||| |||||||| ||| ||| ||| | || Sbjct 281317 GGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCCTT 281258 Query 22015 ATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062 ||| | ||| || || |||| || ||||||||||| ||||| Sbjct 281257 GTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCT 281210 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531874284745120