Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq12 284 1e-71
>seq12
Length=2314596
Score = 284 bits (314), Expect = 1e-71
Identities = 596/888 (67%), Gaps = 6/888 (1%)
Strand=Plus/Minus
Query 21178 TCCCATTTTTTGATAATCACTAACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGA 21237
||| || |||||||| |||| ||| | ||||| || ||||||||||| || || ||
Sbjct 282094 TCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTGGA 282035
Query 21238 TATAGATTCCATAAAATCAAATGGATTTTCAGATTTAAATATTTTATTACAACCCAGTTC 21297
|| | |||||| ||||| ||||| | | ||| | || |||| |||||||| ||
Sbjct 282034 AATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAACTC 281975
Query 21298 TGATAATAATCTATCTGCTACAAATTCTATATATTGACACATTAATTCACAATTCATACC 21357
| ||| | | || ||||||||||| ||||| ||| |||| | || |||||||||||
Sbjct 281974 TACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATACC 281915
Query 21358 GATCAATTTTACAGGAAGAGCTTTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAAC 21417
|| | ||||||| | ||| | || ||||| | ||| || || || ||
Sbjct 281914 AATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCGCG 281855
Query 21418 AATTATATTTATTATCCTAGATGTACT-AGGGGGATACAATAAT-TGTTTAAACATCAAA 21475
|||||||| | ||| || | | | | | || | || ||| | |||||| |||
Sbjct 281854 AATTATATCTGTTA--CTCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACATTAAA 281797
Query 21476 CATGCAAAATCACAATGCAAACCTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAA 21535
|| |||||||||||||||||||||||||| | | || | |||||||||||||| |
Sbjct 281796 CAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCAGT 281737
Query 21536 CCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAA 21595
|| ||||| | || | || || | |||||| || | ||||| |||||||||||||
Sbjct 281736 CCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGAAA 281677
Query 21596 ATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCACCGTATGTAG-ATTCTTTATCCAA 21654
|| || || || || ||||||||||| | |||||| | |||| | |||||| | |
Sbjct 281676 ATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACTGC-T 281618
Query 21655 TATCCATTTTTCTGCCCATTTTGCCTTTTCTTTAATACAATCAATTGTATCAATAGCTTT 21714
||||| | ||||| | ||||| | |||| |||| || || |||||||| ||
Sbjct 281617 GATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCATT 281558
Query 21715 TAAAAGATGAtttttttCATCTACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACAT 21774
|||||| | ||| || ||| || ||| |||||||||
Sbjct 281557 GAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATACAT 281498
Query 21775 TTCAGAATGTATATTTTCTATCGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACA 21834
||| ||||| |||||||| || || || || || || ||||| || | ||||| |
Sbjct 281497 TTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGTTAC 281438
Query 21835 TTGAACCTCGGAATAAAATCGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGC 21894
||| || || | |||| | | | |||||||||||| ||||||||| || ||
Sbjct 281437 TTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCAGC 281378
Query 21895 AAAAAATGCCAATATATTTTTTATAAAATATCGTTCGTTATCTGTTAATTTTTTCCAATC 21954
|||||| || | || || | || |||| | ||| | || || || || | ||| |
Sbjct 281377 AAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAGTG 281318
Query 21955 TAATAAATCTTTTGATAAATCTACTTCTTCAGTTGTCCAAAAGCTAGCAATAGCCTTTTT 22014
| || || || | ||||||||||| |||||||| ||| ||| ||| | ||
Sbjct 281317 GGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCCTT 281258
Query 22015 ATACATAATCCAGATATCATTATATATTATTGGAAATATTACAAACCT 22062
||| | ||| || || |||| || ||||||||||| |||||
Sbjct 281257 GTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCT 281210
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531874284745120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |