Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq310 161 9e-35 seq218 122 7e-23 seq25 116 3e-21 seq428 93.3 4e-14 >seq310 Length=366558 Score = 161 bits (178), Expect = 9e-35 Identities = 1131/1788 (63%), Gaps = 72/1788 (4%) Strand=Plus/Plus Query 131882 TTCGCAGCAGGCTTAGTTCTTAAATAATACATGCCCGTCTTCAAGCCTTTCTCCCAAGAA 131941 || |||||||| || ||||||||||||||||| || || |||||||| |||| ||| | Sbjct 100533 TTAGCAGCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCA 100592 Query 131942 TAATTGTGTATGGACGATAAAATTTTGTAGCTGGGATTGGCCACAAACAGATTGAGCGAT 132001 ||| || |||||||| | | || ||| | || || | | | | ||| | || Sbjct 100593 TAAAAATGAATGGACGACATTACTTGATAGTTTGGCTTTTCAATATGAATATTTAAAGAC 100652 Query 132002 TGACTCTGATCGATGTAAGGTCCCCTGTCTGCGGCCATATTCAACAATACTTTCTGCTTA 132061 || ||||| || || | | ||| | ||||| ||||| || || | ||||||||| | Sbjct 100653 TGGCTCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAA 100712 Query 132062 ATTTCCCAAGCGGTCTTGAAGAGCGCCTTGACGTCGTGTGGAATGTCATCGA-TATTCTG 132120 |||||||| | || || | | | || | || | ||||| || | || |||| || Sbjct 100713 ATTTCCCACACAGTTTTATATATCTTTTTCATATCATCGGGAAT-TCCTGGAATATTTTG 100771 Query 132121 TACAGATCCGTTGTTTTTGATAA------TTTTCATCA--TCAGTTCTGTCGAGTACACG 132172 | || || || | || ||||||||| ||| || | ||| | Sbjct 100772 AATTGAGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCA--TCCCAC-AGTCCTAA 100828 Query 132173 TTGCAGTCTACGAGTTTATCGACG-AGATGTTGATTTACTATTTGATATTCACCCGATAA 132231 | ||||| | | || | | | ||| || || || | | |||| || ||||| Sbjct 100829 CT-CAGTCAAA-----TCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAA 100882 Query 132232 GACTCTTCGTACGTACAAATTACTAGTAAACGGCTCGAACGATTCGTTGTTTCCCAATAT 132291 || | || | || | ||| ||| | || || | ||||| || || ||||| || Sbjct 100883 AACGCGTCTTGTATATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAAT 100942 Query 132292 TTGAGCTGTCGTTGCCGTCGGCATGTAGGCAATCAATAATGAATTGCGCAGCCCGTGTAT 132351 ||| ||||| | || || ||||| ||||| | ||||||||| | | |||| | Sbjct 100943 TTGGGCTGTTGAAGCGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTT 101002 Query 132352 GGCCATTTGCCGTTT--AAGCTCGTCCCAGTTCCACAGATCATTCGATTGAGAGATATTC 132409 || |||| | ||| |||| | |||| | ||||| || | | ||| ||||| Sbjct 101003 AGCAATTTTCGCTTTCAAAGCAC--CCCAATCCCACAAGTCTGTGG---GAGTTTTATTC 101057 Query 132410 CACAAATCAAACTGTAAATGACCGCTACTTGCAGGAGATCCGTTATAAGAATCGTATGCT 132469 |||| |||| |||||||| || | ||| ||||| || | ||||| || | Sbjct 101058 CACATATCATACTGTAAAATCCCCTTGCTTACAGGACTACCTTCATAAGTGGAATAAGGA 101117 Query 132470 CCGTGTAATTTGGCAAGTTCTATGCTCTGACTCAGG-GCACCATAATAAATAGTCTCTGA 132528 || | | | || | ||| ||| || ||| | ||||| ||||| | ||| || | Sbjct 101118 CCATCTTTCTCTGCGATTTCACAGCT-TGCTTCAAGTGCACCGTAATACAAAGTTTCGAA 101176 Query 132529 GATTTTTCTATTCAATTCCCTTGCTTGTTGACTGTCGTAGGGCAAATT---TAAAATAGC 132585 |||| | ||| | || | |||| | ||||| || | | | ||||||| Sbjct 101177 AATTTGTTGATTAAGTTTCGCAGCTTCAGGGCTGTCATAAGCTATACGAAGTAAAATA-- 101234 Query 132586 GAACGCATCGGCAAGTCCCTGAATGCCGATACCGATGGGTCTATGTTTAAAATTCGATAC 132645 || |||||||| | || || | ||||| || || ||||| || | | ||| || Sbjct 101235 -AAAGCATCGGCTAAACCTTGTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGT 101293 Query 132646 TTGTGCG-CTAGTCAGCGGATAAAAGTTTTTGTCTATTATTTTATTGAGATTGTTAGTGA 132704 || || || || | |||||| | || ||| || ||||| || || || || || | Sbjct 101294 TTTGGCCTCTGGTACG-GGATAATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAA 101352 Query 132705 CAACTCTAGCCACTTTATATAGCGATTCAAAGTCAAAGTTTTTAGTCCTTTTGTTGGCA- 132763 ||||| | | | || | || | | ||| || || ||| || | | | | Sbjct 101353 CAACTTTGGTGATTTCTTTTAACTTCTTAAAATCGTAGGATTT--TCTATCGGGCGTTAC 101410 Query 132764 AAACA-ATTGACGGCAATCGAGGCCAAATTGCATACGGCTGTCTCTTTATTATCGCTATA 132822 ||||| ||| || |||| ||| |||||||| || || || || | | |||| Sbjct 101411 AAACATATTCACTGCAAGCGATGCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATA 101470 Query 132823 CTGTACGATTTCTGCACACAAATTACTGTTTCGAATAACTCCCAAGtttttttGATTGTT 132882 | || ||||||| || ||||| ||| ||| ||| ||| ||||||| ||||||| | Sbjct 101471 TTCAACAATTTCTGTGCATAAATTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCT 101530 Query 132883 TTTCTCGTTTACGTT-ATCTTTATGCAACATGTACGGACCTCCGGTTTCGACCTGAATTT 132941 ||| || || | | |||||||| | |||| | ||| || |||||||| ||| Sbjct 101531 TTT-TCTGTTGCATGCATCTTTATATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAA 101589 Query 132942 CGATAATTTTTCTGTG----AAGATCTAACGCCAAAATTTGTTCTTTAAACTTGCCCTGA 132997 | |||| | || || ||| | || | ||| | | || || | Sbjct 101590 C---AATTATAGCATGCCACAATTTCTGA-GCAGGTACTTGAGAAATGTATTTACCTTCT 101645 Query 132998 GTCTCGTAACTTTCGTATAATCGCTCAAATTCTTCGCCATAGCAGTCGTTCAAACCGGGA 133057 | || || |||| || || | ||||| | ||| || | |||| | |||||| Sbjct 101646 GCTTCATACTTTTCATACAACTGTTCAAACTTTTCTCCCCAATTATCGTAAAGTCCGGGA 101705 Query 133058 CACTCGTCAGGACACATCAATGACCATTTTTCTCCTGCGCTCACC-CTTTTCATGAACAA 133116 || | | ||||||||||| |||||| | | | | ||| | |||||||| ||||| Sbjct 101706 CATTGATGAGGACACATCAGTGACCAGTGCCCATTTT-GTTCAACTCTTTTCATAAACAA 101764 Query 133117 CGAAGGTGTCCACATGGCAAAAAATAAATCGCGAGCCTTCATATCTTCCGCGCCCATATT 133176 ||| |||| | |||| |||| ||||| | || |||| ||||| || |||| Sbjct 101765 ATCTGGTATCCATAGGGCATAAAACAAATCTCTTGCTCTCATCTCTTCTTTTCCTGTATT 101824 Query 133177 TCGTTTCAAGTCCaaaaaagtaaaaaTGTCTGCATGCCAAGGCTCGATATATACGGCCAA 133236 | |||||| | ||||| ||| |||||||||||||| || || | ||| | || || Sbjct 101825 TTTTTTCAAATTTAAAAATTCAAATATGTCTGCATGCCATGGTTCAAGATAGATAGCAAA 101884 Query 133237 AGCGCC---TTTCCTTTTACCTCCCTGATCCACATGTCTAAGCATGCTGTTGAAGACACG 133293 ||| || | || | |||||||| ||||| |||| ||| | | || || ||||| Sbjct 101885 AGCACCAGGTCTCTTGTTACCTCCTTGATCTACATATCTGGCTAAATTATTAAAAACACG 101944 Query 133294 CAATGCAGGACCCAATCCTGCGGCAGTACCGTTGGTG---GATTTGATTTTACTGTTAGC 133350 | |||| | || || | ||| ||||||||| | | ||| ||| ||| Sbjct 101945 AAGCATAGGAACTAAACCGTTCGAAGTGCCGTTGGTGCCTGCTATGAAACTACCTTTA-- 102002 Query 133351 GGCACGAAT-TTGAGAAACGTTAAGGCCTATACCGCCTCCGTGTTTAGATATCATGGCAC 133409 ||||| || ||| | ||| | | ||| | ||| ||| | |||||| || | |||| Sbjct 102003 -GCACGTATATTGTG-CACGCTTATGCCCAAACCACCTGCCGATTTAGAAATGAGAGCAC 102060 Query 133410 AATCGT--TGAGAGTTTTATAGATGCCATTGATGCTGTCTTCCTGGATGTTGAGCAAATA 133467 | || | | | |||| | ||||| | ||||| || || | || | ||| | Sbjct 102061 --TTGTAGTCAAACATTTACAAATGCCTTCAATGCTATCATCAGGCATTGCTACCAAGAA 102118 Query 133468 ACACGACGACATCTGAGGCATTTTCATGCCAGAAGAAAACAAAGTGGGACTAGCGTGAGT 133527 |||||| || | |||||| || | | |||| || |||| ||| ||||| || || || Sbjct 102119 ACACGATGAAAGCTGAGGTCTTGTGGTCCCAGCTGAGAACAGAGTAGGACTTGCATGTGT 102178 Query 133528 AAACAGCTTTGATC--GCATCAATCTGTAGGACTCAATTGCGCTTTCAATGTCTTCACCA 133585 || | | |||| ||| || |||| | || |||||| || || |||| | Sbjct 102179 GAAAA--ATCGATCTGACATTAAATTGTACGTTTCTATTGCGGCATCTATATCTTTATAG 102236 Query 133586 TGAATTTGTAGCGCTACACGCATCAGCATATGTTGAGGTCGCTCCACG 133633 ||||| | || || ||||| ||||| |||||||||| || ||| Sbjct 102237 TGAATGCCCACAGCAACTCGCATAAGCATGTGTTGAGGTCTTTCGACG 102284 >seq218 Length=661058 Score = 122 bits (134), Expect = 7e-23 Identities = 166/229 (72%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || || || | ||||| ||| |||| || | ||||| || ||| | Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAA-CCATC 356622 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || ||| | || ||| ||| ||| |||||||||||||| || || ||||| Sbjct 356621 AGATACAATTGAGAATGTTAAAGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCA 356562 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||||| | || | | || || ||||| ||||||| | | | || ||||||||| Sbjct 356561 GCAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCTCCGATTATAA 356502 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||||||||||||| || | ||||| || | ||||||||||||||| Sbjct 356501 TATTCAAAAAGAATCCACTCTCCATTTGGTACTCAGATTGAGAGGAGGA 356453 Score = 107 bits (118), Expect = 2e-18 Identities = 155/216 (72%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | || || |||||||||||||| ||| | || ||| | ||||| || |||| | Sbjct 356224 ATGCAAATCTTCGTCAAAACATTAACTGGTAAAACTATAACCCTTGAAGTAGA-GCCATC 356166 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 || || || || | |||||| || ||| ||||| ||||| || || || ||||| Sbjct 356165 TGATACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAGGAAGGTATCCCACCAGATCA 356106 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 ||| | || |||| | ||| || || | ||||||| ||| | | |||||||| Sbjct 356105 ACAACGTCTTATTTTTGCCGGGAAACAGTTGGAAGATGGACGAACCCTTTCAGATTATAA 356046 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAG 24205 ||||| || ||||||||| | ||||| || || || Sbjct 356045 TATTCAGAAGGAATCTACATTACATTTGGTATTGAG 356010 Score = 95.1 bits (104), Expect = 1e-14 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| |||||||||||| | || || | ||||| || ||| | Sbjct 352380 ATGCAAATTTTTGTTAAAACGTTAACTGGAAAAACCATCACACTGGAAGTAGAA-CCATC 352322 Query 24051 -GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCA 24109 ||||| || || | || || ||||| ||||||||||| || ||||| || || Sbjct 352321 AGACACAATTGAAAACGTGAAGGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCA 352262 Query 24110 ACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAA 24169 || | |||||| | ||| || ||| | ||||||| |||| | ||||| || Sbjct 352261 GCAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGATTACAA 352202 Query 24170 CATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGGA 24218 |||||| ||||| ||| | ||||| || ||| | | ||||| ||| Sbjct 352201 CATTCAGAAAGAGAGTACCCTCCATTTGGTTTTACGTCTTAGAGGTGGA 352153 >seq25 Length=1883024 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 23991 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAGGCCAAC 24050 |||||| | ||||| ||||| | || |||||| | || ||| | || || || || Sbjct 1512251 ATGCAAATTTTTGTGAAAACTCTTACCGGAAAAACAATCACCCTTGAGGTTGAACCCTCA 1512192 Query 24051 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCCGATCAA 24110 ||||| ||||| | || || |||||| ||||| ||||| || ||||| |||||| Sbjct 1512191 GACACAATCGAAAATGTAAAGGCGAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 1512132 Query 24111 CAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGATTATAAC 24170 ||||| | |||| || || |||||| | ||||||| | | | | || |||||| Sbjct 1512131 CAGAGGTTAATTTTCGCTGGTAAGCAATTAGAAGATGGCCGTACTCTTTCTGACTATAAC 1512072 Query 24171 ATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 ||||| |||||||| || | || || |||||| | || |||||||| Sbjct 1512071 ATTCAGAAAGAATCGACCTTACACTTGGTGTTACGTTTAAGAGGAGG 1512025 >seq428 Length=160056 Score = 93.3 bits (102), Expect = 4e-14 Identities = 165/241 (68%), Gaps = 0/241 (0%) Strand=Plus/Plus Query 23977 TTTAGCCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCG 24036 ||||||| ||| |||||| | || || || || ||||| || || | || || | | Sbjct 129430 TTTAGCCTCACAGGATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAG 129489 Query 24037 AAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCA 24096 | ||||| | ||| || ||||| | || || ||| || || |||||||| | Sbjct 129490 AGGTCGAACCGTCCGATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAA 129549 Query 24097 TACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACG 24156 | || || || ||||| | || |||| | || || ||| | ||||||| | | | Sbjct 129550 TTCCACCTGACCAACAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTT 129609 Query 24157 TCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAG 24216 | ||||| ||||| ||||| ||||| ||| | ||||| || ||||||||||| |||| Sbjct 129610 TGTCTGATTACAACATCCAAAAGGAATCGACATTGCATTTGGTCTTAAGATTGAGGGGAG 129669 Query 24217 G 24217 | Sbjct 129670 G 129670 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429915103498140