Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_007921.1
Length=147544
Score E
Sequences producing significant alignments: (Bits) Value
seq218 89.7 5e-13
seq428 84.2 2e-11
>seq218
Length=661058
Score = 89.7 bits (98), Expect = 5e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 131023 AGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCC 131082
|| || ||||| | || || || |||||||| || |||||| | ||| || ||
Sbjct 356469 AGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACCATCT 356528
Query 131083 TCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCG 131142
|| || || || ||||| ||||||| | |||||| || || || || |||||||||||
Sbjct 356529 TCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTTGTC- 356587
Query 131143 GTGATTTTCTGCTTGAGC-TGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGT 131201
||| ||| ||||| | | | ||| | ||||| | | || | || | || | ||
Sbjct 356588 TTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACTTCTAAAGTGATCGT 356647
Query 131202 TTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|||||| || || || || |||||||| |||||
Sbjct 356648 TTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
>seq428
Length=160056
Score = 84.2 bits (92), Expect = 2e-11
Identities = 144/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 131026 ACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTCATGGTGCGCGAGTCCTCT 131085
|| ||||| | ||||| |||||||| ||||||||||| || || || || ||
Sbjct 129652 ACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCATCTTCC 129593
Query 131086 AGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTG 131145
| || || || || | |||| ||| || ||||| || || ||||||||||| || |
Sbjct 129592 AATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTGG 129533
Query 131146 ATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTA 131205
||||| ||| | | || | ||||||| | |||| || | || | ||| |||
Sbjct 129532 ATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGGTCTTA 129473
Query 131206 CCGGTTAGAGTTTTTACGAAAATCTGCAT 131234
|| |||| ||| || ||||| || |||||
Sbjct 129472 CCCGTTAAAGTCTTCACGAATATTTGCAT 129444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 471989270161920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |