Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_008035.3
Length=126629
Score E
Sequences producing significant alignments: (Bits) Value
seq218 87.8 1e-12
>seq218
Length=661058
Score = 87.8 bits (96), Expect = 1e-12
Identities = 147/211 (70%), Gaps = 4/211 (2%)
Strand=Plus/Plus
Query 16727 ACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCC 16786
|||| ||| || || ||| || || |||||||| || | || ||| | | || |||
Sbjct 352172 ACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCATCTTCC 352231
Query 16787 AATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GG 16844
|||||||| || ||| |||| | || || ||||| ||| | || |||||||| ||
Sbjct 352232 AATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGG 352291
Query 16845 CAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTT 16904
|| || |||||| | | | ||||| || || ||||| ||||||||||
Sbjct 352292 ATCTTAGC--CTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATGGTTT 352349
Query 16905 TTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935
|||| || | |||||| |||||||| |||||
Sbjct 352350 TTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 405068311204120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |