Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq218 87.8 1e-12 >seq218 Length=661058 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/211 (70%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 16727 ACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCGTCCTCC 16786 |||| ||| || || ||| || || |||||||| || | || ||| | | || ||| Sbjct 352172 ACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCATCTTCC 352231 Query 16787 AATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTGTC--GG 16844 |||||||| || ||| |||| | || || ||||| ||| | || |||||||| || Sbjct 352232 AATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGG 352291 Query 16845 CAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATGGTTT 16904 || || |||||| | | | ||||| || || ||||| |||||||||| Sbjct 352292 ATCTTAGC--CTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATGGTTT 352349 Query 16905 TTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| || | |||||| |||||||| ||||| Sbjct 352350 TTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405068311204120