Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq310 533 2e-146
seq12 351 1e-91
>seq310
Length=366558
Score = 533 bits (590), Expect = 2e-146
Identities = 1242/1857 (67%), Gaps = 31/1857 (2%)
Strand=Plus/Plus
Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930
|| ||||| || | || ||| ||||| || ||||| | || ||||||| ||||||
Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598
Query 61931 TGCATACTCGTTAGT--TTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGAC 61988
|| || || | | ||| ||| | || | | | ||||| ||||| | ||| || |
Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656
Query 61989 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTT 62048
| || || || |||||||| | ||||| ||||| |||| ||| || |||| |||||
Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716
Query 62049 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 62105
|||| | ||||||||| | || ||||| || |||| || |||| ||||| |
Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776
Query 62106 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTA 62165
| |||| || || | || | || || ||| | |||| ||| | | | ||| || |
Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCA 100836
Query 62166 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 62225
|| ||||||| | ||| | || || || |||||||||||| || || | | || |
Sbjct 100837 AATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTAT 100896
Query 62226 AAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 62285
| | ||| || || ||||| ||||| |||||||| ||||||||||| || ||||| |
Sbjct 100897 ATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAG 100956
Query 62286 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTT 62345
| || ||||| || || | | ||| |||||||| |||||| | ||||| |||
Sbjct 100957 CGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGCTT 101016
Query 62346 TTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAA 62405
| | || |||||| ||| | || | || |||| ||
Sbjct 101017 TCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAAA 101076
Query 62406 TACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGT 62464
| || || || | | || | ||| |||| || || || || || ||||| || | |
Sbjct 101077 TCCCCTTGCTTACAGGACTA-CCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATT 101135
Query 62465 TCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCT 62524
||||| || || || | |||||||||||| | |||||||| || | | ||| || | |
Sbjct 101136 TCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTT-T 101194
Query 62525 TGC-GCTTCCAGGCTATCAAATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTT 62582
|| ||||| |||| ||| | | || ||| | |||||| || || ||||| ||||
Sbjct 101195 CGCAGCTTCAGGGCTGTCATAAGC-TATACGAAGTAAAATAAAAGCATCGGCTAAACCTT 101253
Query 62583 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGAT 62642
| ||||| || || || ||||| || ||| ||| ||| ||| || ||||| | ||||
Sbjct 101254 GTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGAT 101313
Query 62643 AATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCA 62702
||||||||| || |||||||| || || ||| | || |||||| | || || |
Sbjct 101314 AATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTA 101373
Query 62703 GTTTGAGAAAATCAAA---TCGCCCATCTA---TTACAAACATGTTCAATGCAACAGATG 62756
|| |||||| | | | ||| |||||||||| |||| ||||| ||||
Sbjct 101374 ACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGATG 101433
Query 62757 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 62816
||| |||||| || || || || | || | ||||| | || || ||||| | ||
Sbjct 101434 CCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAAT 101493
Query 62817 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 62876
| || | | || |||||||| ||||||||||| || ||| |||| || ||||| ||||
Sbjct 101494 TGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTAT 101553
Query 62877 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 62936
| || ||||| ||||| |||||||| | ||||| | || || || | ||| |
Sbjct 101554 ATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATTTCT 101613
Query 62937 GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGA 62996
|||| || | ||| ||||| | |||| ||| || | |||||| |||| |
Sbjct 101614 GAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTTCAA 101673
Query 62997 ACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACT 63056
||| ||||||||| || || ||||| ||||||| || |||||||||| ||||| |
Sbjct 101674 ACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACCAGT 101733
Query 63057 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 63116
|| | | | |||| ||||||||| | ||| || ||||| || || ||| | ||
Sbjct 101734 GCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAAAT 101793
Query 63117 CTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 63176
|||| | ||| || || ||||||||||| ||||| | || | || | | || |
Sbjct 101794 CTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATATGT 101853
Query 63177 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGAT 63236
| | |||||| ||||| | || || || | | | ||||| | ||||| ||||| ||||
Sbjct 101854 CTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTGAT 101913
Query 63237 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTAC 63296
||| ||||| || |||||| |||| | | ||| |||| | ||| || || || |
Sbjct 101914 CTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGTGC 101973
Query 63297 CATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTC 63356
| ||||| |||| || | || || | ||||| ||||| | || || | |
Sbjct 101974 CGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCAAAC 102033
Query 63357 CCCCTGCCATTTTAGAGATTAATGCGCATCGT--TTTAACGTATCATAGATGCCCTCTAT 63414
| |||||| |||||| || | || | | || | ||| | | | | ||||| || ||
Sbjct 102034 CACCTGCCGATTTAGAAATGAGAGCAC-TTGTAGTCAAACAT-TTACAAATGCCTTCAAT 102091
Query 63415 ACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT--TCC 63471
|||||||| || || || || ||||| || | | ||| | || || |||
Sbjct 102092 GCTATCATCAGGCATTGCTACCAAG-AAACACGATGAAA---GCTGAGGTCTTGTGGTCC 102147
Query 63472 C-GCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACG 63530
| || || | |||||| || || || || || || || | || ||||||||
Sbjct 102148 CAGCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACG 102207
Query 63531 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63590
| || || || | |||||||| | ||||| || || || || ||||| | |||||
Sbjct 102208 TTTCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGT 102267
Query 63591 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63650
| ||||||||||| ||||| || ||| | |||||| | || || ||| |||||||
Sbjct 102268 GTTGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTT 102327
Query 63651 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63707
||||||||||||| ||||| ||||| || || || || | ||||| || || ||||
Sbjct 102328 TAAAACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384
>seq12
Length=2314596
Score = 351 bits (388), Expect = 1e-91
Identities = 634/921 (69%), Gaps = 17/921 (2%)
Strand=Plus/Minus
Query 32361 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAAT 32420
||||| || ||||| |||||||| || ||||| || ||||| || || || ||
Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037
Query 32421 GATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAAT 32480
|| || || | ||| || || || ||||| ||||||||||||| || | | | |||||
Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977
Query 32481 TCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 32540
|| | | | || || |||||||| ||||| ||||| || ||||||||
Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917
Query 32541 CCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCT 32600
|| || || | || || | ||| |||| | |||||| |||||||| || || ||
Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857
Query 32601 GTTATAATAGATCTTACTGTTTCTTCACTCGGTGGAT-----ACAATAAATGTTTAAACA 32655
|| ||| | ||||| |||| | | ||| | |||||| | | |||||
Sbjct 281856 CGAATTATATCTGTTACTCGCTCTT---TTGATGGTTTTTGAACAATATAAGA--AAACA 281802
Query 32656 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 32715
| ||||| || ||||| || || | ||| || || | | ||| | || || ||||| |
Sbjct 281801 TTAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATG 281742
Query 32716 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 32775
| ||||| ||||| || || || || || |||||||| || | ||||| ||| ||||
Sbjct 281741 TCAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAA 281682
Query 32776 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA- 32834
||||||||||||| || || ||||| |||| || || ||| | || | | |
Sbjct 281681 AGAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTAC 281622
Query 32835 TGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 32892
|| ||||| | |||||||||| |||||||| || ||||||||||| || || ||||
Sbjct 281621 TGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAG 281562
Query 32893 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAT--GTATCAATCAAAAGACT 32950
|||| || ||| | | ||| || | || | || |||| || ||||| | | |||
Sbjct 281561 CATTGAAAAGAAATTCTTTCTCTT--CTGGGTCAAATATATAAGTGTCAATGAGAGTACT 281504
Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010
||||||||| ||||| || ||||||||||| ||||| || || || ||||| | ||||||
Sbjct 281503 ATACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTC 281444
Query 33011 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 33070
|| | ||||||||| || |||| ||| | | |||||||| || ||||| |||
Sbjct 281443 AGTTACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGA 281384
Query 33071 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT 33130
|| |||||||| || | ||||||| || |||| |||| || || | ||||
Sbjct 281383 TGCAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATC 281324
Query 33131 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33190
||| | | || ||||| | || |||||||| |||||| || || || || ||
Sbjct 281323 CCAGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGC 281264
Query 33191 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGG 33250
| || ||| | | ||| ||||| |||||||||| ||||| || || || || ||||
Sbjct 281263 TTCCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGG 281204
Query 33251 ATTTTTTGCAAGGATTGGTTC 33271
||||| | ||| | ||||||
Sbjct 281203 ATTTTCTCTAAGCAATGGTTC 281183
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633600413444800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |