Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq310 533 2e-146 seq12 351 1e-91 >seq310 Length=366558 Score = 533 bits (590), Expect = 2e-146 Identities = 1242/1857 (67%), Gaps = 31/1857 (2%) Strand=Plus/Plus Query 61871 GCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAGACCGAGACTCCATCCGTAAAAA 61930 || ||||| || | || ||| ||||| || ||||| | || ||||||| |||||| Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598 Query 61931 TGCATACTCGTTAGT--TTGGAATAACTCGGATCTGCTATATGGATATTCATAGATTGAC 61988 || || || | | ||| ||| | || | | | ||||| ||||| | ||| || | Sbjct 100599 TGAATGGACGACATTACTTG--ATAGTTTGGCTTTTCAATATGAATATTTAAAGACTGGC 100656 Query 61989 TTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATAATCGTCTTTTGTGGAATTT 62048 | || || || |||||||| | ||||| ||||| |||| ||| || |||| ||||| Sbjct 100657 TCTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTT 100716 Query 62049 CCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAAGGTTTG---TATTCTGAATGG 62105 |||| | ||||||||| | || ||||| || |||| || |||| ||||| | Sbjct 100717 CCCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTG 100776 Query 62106 ATCCACCATCTGCCATAATCCTATTCTTGATCTCATCATTCCATAATTTTCTCTCGGTTA 62165 | |||| || || | || | || || ||| | |||| ||| | | | ||| || | Sbjct 100777 AGCCACAATTGGCAAGAACCTGGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCA 100836 Query 62166 AAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCTCCAGACAATACTCTCCGAGTGT 62225 || ||||||| | ||| | || || || |||||||||||| || || | | || | Sbjct 100837 AATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTAT 100896 Query 62226 AAATATTACTGGTATACGGTTCCACAGACTCATTATTTCCCAAAATTTGAGCAGTTGATG 62285 | | ||| || || ||||| ||||| |||||||| ||||||||||| || ||||| | Sbjct 100897 ATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAG 100956 Query 62286 CAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGACCGTATGTTCTGATTTTATCTT 62345 | || ||||| || || | | ||| |||||||| |||||| | ||||| ||| Sbjct 100957 CGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGCTT 101016 Query 62346 TTAGAGGTTCCCAATTCCAAAGATCCGACGGTACAACNNNNNNNNNNNNNNNTTGTAGAA 62405 | | || |||||| ||| | || | || |||| || Sbjct 101017 TCAAAGCACCCCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAAA 101076 Query 62406 TACCGTTACTGGC-GTACGATCCTACATATGTATCGTATGGTCCTTCCTTCTCAGCTAGT 62464 | || || || | | || | ||| |||| || || || || || ||||| || | | Sbjct 101077 TCCCCTTGCTTACAGGACTA-CCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATT 101135 Query 62465 TCACAACTCGCCTCTAATGCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCT 62524 ||||| || || || | |||||||||||| | |||||||| || | | ||| || | | Sbjct 101136 TCACAGCTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTT-T 101194 Query 62525 TGC-GCTTCCAGGCTATCAAATGGATAATTTAAG-AGAATAAACGCGTCTGCTAATCCTT 62582 || ||||| |||| ||| | | || ||| | |||||| || || ||||| |||| Sbjct 101195 CGCAGCTTCAGGGCTGTCATAAGC-TATACGAAGTAAAATAAAAGCATCGGCTAAACCTT 101253 Query 62583 GAACACCAATACCGATAGGTCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGAT 62642 | ||||| || || || ||||| || ||| ||| ||| ||| || ||||| | |||| Sbjct 101254 GTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGAT 101313 Query 62643 AATAATTAATATCTATAATTTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCA 62702 ||||||||| || |||||||| || || ||| | || |||||| | || || | Sbjct 101314 AATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTA 101373 Query 62703 GTTTGAGAAAATCAAA---TCGCCCATCTA---TTACAAACATGTTCAATGCAACAGATG 62756 || |||||| | | | ||| |||||||||| |||| ||||| |||| Sbjct 101374 ACTTCTTAAAATCGTAGGATTTTCTATCGGGCGTTACAAACATATTCACTGCAAGCGATG 101433 Query 62757 CCAGATTACAAACGGCTACCTCATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGAT 62816 ||| |||||| || || || || | || | ||||| | || || ||||| | || Sbjct 101434 CCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAAT 101493 Query 62817 TACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTAT 62876 | || | | || |||||||| ||||||||||| || ||| |||| || ||||| |||| Sbjct 101494 TGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTAT 101553 Query 62877 AAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTC 62936 | || ||||| ||||| |||||||| | ||||| | || || || | ||| | Sbjct 101554 ATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATTTCT 101613 Query 62937 GAGCCTTTATTATAGATTTGTATCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGA 62996 |||| || | ||| ||||| | |||| ||| || | |||||| |||| | Sbjct 101614 GAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTTCAA 101673 Query 62997 ACTCGTCTCCCCAAACATTGTCCAGTCCAGGACATTCATCCGGACACATCAACGACCACT 63056 ||| ||||||||| || || ||||| ||||||| || |||||||||| ||||| | Sbjct 101674 ACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACCAGT 101733 Query 63057 CTCCGTCATCCTTCACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGAT 63116 || | | | |||| ||||||||| | ||| || ||||| || || ||| | || Sbjct 101734 GCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAAAT 101793 Query 63117 CTCTGGTTCTATGTTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATAT 63176 |||| | ||| || || ||||||||||| ||||| | || | || | | || | Sbjct 101794 CTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATATGT 101853 Query 63177 CAGAATGCCACGGTTCCAAGTATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGAT 63236 | | |||||| ||||| | || || || | | | ||||| | ||||| ||||| |||| Sbjct 101854 CTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTGAT 101913 Query 63237 CTATGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGTAC 63296 ||| ||||| || |||||| |||| | | ||| |||| | ||| || || || | Sbjct 101914 CTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGTGC 101973 Query 63297 CATTGGTCCCTGAGATATAGCTTCCACTGGCACGAATATTACTAATTGATAGACCTATTC 63356 | ||||| |||| || | || || | ||||| ||||| | || || | | Sbjct 101974 CGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCAAAC 102033 Query 63357 CCCCTGCCATTTTAGAGATTAATGCGCATCGT--TTTAACGTATCATAGATGCCCTCTAT 63414 | |||||| |||||| || | || | | || | ||| | | | | ||||| || || Sbjct 102034 CACCTGCCGATTTAGAAATGAGAGCAC-TTGTAGTCAAACAT-TTACAAATGCCTTCAAT 102091 Query 63415 ACTATCATCCATCA-TGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGT--TCC 63471 |||||||| || || || || ||||| || | | ||| | || || ||| Sbjct 102092 GCTATCATCAGGCATTGCTACCAAG-AAACACGATGAAA---GCTGAGGTCTTGTGGTCC 102147 Query 63472 C-GCATTAAATAAGGTAGGAGAAGCGTGAGTAAACCATTTTTCAGAAAGTAGATTGTACG 63530 | || || | |||||| || || || || || || || | || |||||||| Sbjct 102148 CAGCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACG 102207 Query 63531 TCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAACATGT 63590 | || || || | |||||||| | ||||| || || || || ||||| | ||||| Sbjct 102208 TTTCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGT 102267 Query 63591 GCTGAGGTCTTTCAACGATCTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAAAGTTT 63650 | ||||||||||| ||||| || ||| | |||||| | || || ||| ||||||| Sbjct 102268 GTTGAGGTCTTTCGACGATTTTTCCGTTGACTTTCAAGAGATACGAACGTTCTAAAGTTT 102327 Query 63651 TAAAACCAAAATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAGTTGAGTT 63707 ||||||||||||| ||||| ||||| || || || || | ||||| || || |||| Sbjct 102328 TAAAACCAAAATAATTGTAGGAAAAATCGCGATCATAGACGATAACGGAATTCAGTT 102384 >seq12 Length=2314596 Score = 351 bits (388), Expect = 1e-91 Identities = 634/921 (69%), Gaps = 17/921 (2%) Strand=Plus/Minus Query 32361 ACTCCCATTTTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAAT 32420 ||||| || ||||| |||||||| || ||||| || ||||| || || || || Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATCAGTG 282037 Query 32421 GATATATTTTCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAAT 32480 || || || | ||| || || || ||||| ||||||||||||| || | | | ||||| Sbjct 282036 GAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAAC 281977 Query 32481 TCAGAAATCAATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATT 32540 || | | | || || |||||||| ||||| ||||| || |||||||| Sbjct 281976 TCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATA 281917 Query 32541 CCTATAAGTTTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCT 32600 || || || | || || | ||| |||| | |||||| |||||||| || || || Sbjct 281916 CCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCG 281857 Query 32601 GTTATAATAGATCTTACTGTTTCTTCACTCGGTGGAT-----ACAATAAATGTTTAAACA 32655 || ||| | ||||| |||| | | ||| | |||||| | | ||||| Sbjct 281856 CGAATTATATCTGTTACTCGCTCTT---TTGATGGTTTTTGAACAATATAAGA--AAACA 281802 Query 32656 TCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACG 32715 | ||||| || ||||| || || | ||| || || | | ||| | || || ||||| | Sbjct 281801 TTAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATG 281742 Query 32716 TGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAA 32775 | ||||| ||||| || || || || || |||||||| || | ||||| ||| |||| Sbjct 281741 TCAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAA 281682 Query 32776 AGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCA- 32834 ||||||||||||| || || ||||| |||| || || ||| | || | | | Sbjct 281681 AGAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTAC 281622 Query 32835 TGT--ATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAG 32892 || ||||| | |||||||||| |||||||| || ||||||||||| || || |||| Sbjct 281621 TGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAG 281562 Query 32893 CATTAAAGAGATAGtttttttCATTACTATCTTTAACATAT--GTATCAATCAAAAGACT 32950 |||| || ||| | | ||| || | || | || |||| || ||||| | | ||| Sbjct 281561 CATTGAAAAGAAATTCTTTCTCTT--CTGGGTCAAATATATAAGTGTCAATGAGAGTACT 281504 Query 32951 ATACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTC 33010 ||||||||| ||||| || ||||||||||| ||||| || || || ||||| | |||||| Sbjct 281503 ATACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTC 281444 Query 33011 GGTAATCTGTACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACT 33070 || | ||||||||| || |||| ||| | | |||||||| || ||||| ||| Sbjct 281443 AGTTACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGA 281384 Query 33071 GGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGTTTATT 33130 || |||||||| || | ||||||| || |||| |||| || || | |||| Sbjct 281383 TGCAGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATC 281324 Query 33131 CCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGC 33190 ||| | | || ||||| | || |||||||| |||||| || || || || || Sbjct 281323 CCAGTGGGCAAGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGC 281264 Query 33191 CTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCTATTTGG 33250 | || ||| | | ||| ||||| |||||||||| ||||| || || || || |||| Sbjct 281263 TTCCTTGTACTTTTCCCAAATGTCTGGATATTGAATAGGAAATATTACGAACCTTCTTGG 281204 Query 33251 ATTTTTTGCAAGGATTGGTTC 33271 ||||| | ||| | |||||| Sbjct 281203 ATTTTCTCTAAGCAATGGTTC 281183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633600413444800