Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq428 158 1e-33
seq218 154 1e-32
seq25 127 2e-24
>seq428
Length=160056
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
||||||||||| || |||||||| || ||||| ||||||| | || || || ||||
Sbjct 129444 ATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTCC 129503
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
|| || ||||| ||||| ||||||| || |||||||| |||||||||||||||
Sbjct 129504 GATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCAA 129563
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | |||||||| || |||||||| ||||||| || ||| || ||||||||
Sbjct 129564 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAAC 129623
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||| ||||| || | ||||| || |||| | || |||||
Sbjct 129624 ATCCAAAAGGAATCGACATTGCATTTGGTCTTAAGATTGAGGGGAGG 129670
>seq218
Length=661058
Score = 154 bits (170), Expect = 1e-32
Identities = 175/232 (75%), Gaps = 6/232 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| | || |||||| | ||||| | ||||| || | ||
Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAACCATCA 356621
Query 25059 GACACTATCGAGTCACTG---AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGAC 25115
|| || || ||| | || ||||||||| ||| ||||||||||| |||||||| ||
Sbjct 356620 GATACAATTGAG--AATGTTAAAGCAAAAATTCAA-GACAAAGAAGGCATTCCACCAGAT 356564
Query 25116 CAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTAC 25175
|| ||| || | || ||||| || |||||| | ||||||| ||| || | ||||||
Sbjct 356563 CAGCAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCTCCGATTAT 356504
Query 25176 AATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
|||||||||||||||||||| || ||||| || || || | ||||||||||
Sbjct 356503 AATATTCAAAAAGAATCCACTCTCCATTTGGTACTCAGATTGAGAGGAGGAA 356452
Score = 149 bits (164), Expect = 5e-31
Identities = 172/229 (75%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || |||||||||||| | || || || ||||||| | ||||| ||| | ||
Sbjct 356453 AATGCAGATCTTTGTAAAGACTCTTACTGGAAAGACCATCACTCTAGAAGTTGAGCCATC 356394
Query 25058 TGACACTATCGAGT-CACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
||| || || || | | |||| |||| ||| ||||| ||||| ||||| || ||||
Sbjct 356393 TGATACAATTGAAAACGTTAAAGCTAAAATTCAA-GACAAGGAAGGTATTCCTCCAGACC 356335
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| || | |||||||| || || || |||||||||| |||||| | || ||||
Sbjct 356334 AACAACGTCTAATTTTTGCTGGGAAGCAGTTAGAAGATGGTCGCACCCTTTCTGACTACA 356275
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||||||||||| || || |||||||| | | || ||||| ||
Sbjct 356274 ATATTCAAAAAGAATCGACTCTGCATTTAGTTTTGCGTCTCAGAGGTGG 356226
Score = 138 bits (152), Expect = 1e-27
Identities = 168/229 (73%), Gaps = 0/229 (0%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || || || || || ||| |||||||| | ||||| || | ||
Sbjct 352380 ATGCAAATTTTTGTTAAAACGTTAACTGGAAAAACCATCACACTGGAAGTAGAACCATCA 352321
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||| || || ||||| || ||| ||||||||||| ||||| || |||||
Sbjct 352320 GACACAATTGAAAACGTGAAGGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 352261
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| || | ||||||||||| |||||||| ||||||| | | ||| || ||||||||
Sbjct 352260 CAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 352201
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAA 25227
||||| ||||| || || ||||| || || | || ||||| ||||
Sbjct 352200 ATTCAGAAAGAGAGTACCCTCCATTTGGTTTTACGTCTTAGAGGTGGAA 352152
Score = 131 bits (144), Expect = 1e-25
Identities = 168/229 (73%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24998 AATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTC 25057
|||||| || ||||| ||||| | || |||||| | ||||| | || || || ||||
Sbjct 356909 AATGCAGATTTTTGTTAAGACACTAACTGGTAAAACAATCACCCTTGAGGTAGAACCGTC 356850
Query 25058 TGACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||| || ||| | ||| | |||| ||| || ||||| || |||||||| ||||
Sbjct 356849 TGACACAATAGAGAACGTAAAGGCTAAAATTCAA-GATAAAGAGGGTATTCCACCAGACC 356791
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
|||| | | |||||||| ||||| || | ||||||| | | || || |||||||
Sbjct 356790 AACAAAGATTAATTTTTGCTGGCAAGCAGCTTGAAGATGGTAGGACATTGTCTGATTACA 356731
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || || ||||||||||| || |||||||| | | || ||||||||
Sbjct 356730 ACATCCAGAAAGAATCCACCCTTCATTTAGTTTTGCGTCTTAGAGGAGG 356682
Score = 127 bits (140), Expect = 2e-24
Identities = 168/231 (73%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || || || |||||| | || || | ||||| ||| | |||
Sbjct 356224 ATGCAAATCTTCGTCAAAACATTAACTGGTAAAACTATAACCCTTGAAGTAGAGCCATCT 356165
Query 25059 GACACTATCGA----GTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGA 25114
|| || || || |||| |||| |||| ||| ||||| ||||| || ||||| ||
Sbjct 356164 GATACAATAGAAAACGTCA---AAGCCAAAATTCAA-GACAAGGAAGGTATCCCACCAGA 356109
Query 25115 CCAACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTA 25174
||||| || ||||||||||||| ||||| || ||||||| || || | |||||
Sbjct 356108 TCAACAACGTCTTATTTTTGCCGGGAAACAGTTGGAAGATGGACGAACCCTTTCAGATTA 356049
Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|||||||| || ||||| || ||||||| || | ||||| |||| ||
Sbjct 356048 TAATATTCAGAAGGAATCTACATTACATTTGGTATTGAGGCTTCGAGGTGG 355998
Score = 113 bits (124), Expect = 4e-20
Identities = 155/217 (71%), Gaps = 0/217 (0%)
Strand=Plus/Minus
Query 25009 TTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCTGACACTATCG 25068
|||| ||||| | || |||||| | |||||| | ||||| || |||| ||||| || |
Sbjct 357451 TTGTTAAGACACTAACTGGTAAAACAATCACACTGGAAGTAGAACCGTCAGACACAATTG 357392
Query 25069 AGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAACAGCGGATTA 25128
| ||||| || ||| ||||||||||| ||||| || |||||||| || | |
Sbjct 357391 AAAATGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAACAACGTTTGA 357332
Query 25129 TTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAATATTCAAAAAG 25188
||||||| || || ||||| ||||||| | | || || |||||||| ||||| ||||
Sbjct 357331 TTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACATTGTCTGATTACAACATTCAGAAAG 357272
Query 25189 AATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || || ||||| || || | || | |||||
Sbjct 357271 AGAGTACCCTCCATTTGGTTTTACGTCTTCGTGGAGG 357235
>seq25
Length=1883024
Score = 127 bits (140), Expect = 2e-24
Identities = 172/236 (73%), Gaps = 3/236 (1%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| || ||| | ||||| ||| | ||||| | || || || | ||
Sbjct 1512251 ATGCAAATTTTTGTGAAAACTCTTACCGGAAAAACAATCACCCTTGAGGTTGAACCCTCA 1512192
Query 25059 GACACTATCGAGTCACTGAAG-CAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCA 25117
||||| ||||| | ||| | || | ||| ||||| ||||| ||||| ||||| ||
Sbjct 1512191 GACACAATCGAAAATGTAAAGGCGAAGATTCAA-GACAAGGAAGGTATTCCTCCTGATCA 1512133
Query 25118 ACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAA 25177
|||| || | ||||| || || || ||||||||||||| || ||| | || || ||
Sbjct 1512132 ACAGAGGTTAATTTTCGCTGGTAAGCAATTAGAAGATGGCCGTACTCTTTCTGACTATAA 1512073
Query 25178 TATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGGAAATTATT 25233
||||| |||||||| || |||| || ||| || | |||||||||| ||||||
Sbjct 1512072 CATTCAGAAAGAATCGACCTTACACTTGGTGTTACGTTTAAGAGGAGG-TATTATT 1512018
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433306938634220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |