Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_008586.1
Length=131204
Score E
Sequences producing significant alignments: (Bits) Value
seq218 170 2e-37
seq428 152 4e-32
seq25 141 8e-29
seq310 118 9e-22
>seq218
Length=661058
Score = 170 bits (188), Expect = 2e-37
Identities = 181/239 (76%), Gaps = 0/239 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||| || || ||||| ||||| |||||||| | || |||||||| || | |
Sbjct 356224 ATGCAAATCTTCGTCAAAACATTAACTGGTAAAACTATAACCCTTGAAGTAGAGCCATCT 356165
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | ||||| ||||||||||||||||| ||||| ||||| ||||||
Sbjct 356164 GATACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAGGAAGGTATCCCACCAGATCAA 356105
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||||||||||| |||||||| |||||||| || ||| || ||| | || ||||| ||
Sbjct 356104 CAACGTCTTATTTTTGCCGGGAAACAGTTGGAAGATGGACGAACCCTTTCAGATTATAAT 356045
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTTCCATTTTA 22457
||||| || ||||| || ||||||| || ||| | | || || ||| | | | ||||
Sbjct 356044 ATTCAGAAGGAATCTACATTACATTTGGTATTGAGGCTTCGAGGTGGTATGCAAATTTA 355986
Score = 158 bits (174), Expect = 1e-33
Identities = 164/215 (76%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| || ||||| || ||| | || || || || ||||||| ||||| || | |
Sbjct 356452 ATGCAGATCTTTGTAAAGACTCTTACTGGAAAGACCATCACTCTAGAAGTTGAGCCATCT 356393
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || | | ||| ||||||||||||||||| |||||||| || || |||
Sbjct 356392 GATACAATTGAAAACGTTAAAGCTAAAATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 356333
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||||| || ||||| || || |||||||| ||| |||||| | || || |||||
Sbjct 356332 CAACGTCTAATTTTTGCTGGGAAGCAGTTAGAAGATGGTCGCACCCTTTCTGACTACAAT 356273
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
|||||||||||||| || | ||||||||||||||
Sbjct 356272 ATTCAAAAAGAATCGACTCTGCATTTAGTTTTGCG 356238
Score = 149 bits (164), Expect = 5e-31
Identities = 169/227 (74%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||||||||| || || || | || ||||||||| ||||| | ||||| ||| | |
Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAACCATCA 356621
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
||||| | || || | ||| ||||||||||||||| || || |||||||| |||||
Sbjct 356620 GATACAATTGAGAATGTTAAAGCAAAAATTCAAGACAAAGAAGGCATTCCACCAGATCAG 356561
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || ||||| || ||||| | || ||| || ||| |||||||||| ||
Sbjct 356560 CAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCTCCGATTATAAT 356501
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445
||||||||||||||||| | ||||| || | ||||| | |||||
Sbjct 356500 ATTCAAAAAGAATCCACTCTCCATTTGGTACTCAGATTGAGAGGAGG 356454
Score = 145 bits (160), Expect = 6e-30
Identities = 169/228 (74%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
||||| ||||||||||| || |||| |||||||| |||| ||||| || ||| | |
Sbjct 356908 ATGCAGATTTTTGTTAAGACACTAACTGGTAAAACAATCACCCTTGAGGTAGAACCGTCT 356849
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || ||||||||||| || |||||||||||||| || |||
Sbjct 356848 GACACAATAGAGAACGTAAAGGCTAAAATTCAAGATAAAGAGGGTATTCCACCAGACCAA 356789
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
||| | | || ||||| ||||| ||| | || ||| | || | || |||||||||
Sbjct 356788 CAAAGATTAATTTTTGCTGGCAAGCAGCTTGAAGATGGTAGGACATTGTCTGATTACAAC 356729
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
|| || |||||||||||| | |||||||||||||| | | ||||||
Sbjct 356728 ATCCAGAAAGAATCCACCCTTCATTTAGTTTTGCGTCTTAGAGGAGGT 356681
Score = 122 bits (134), Expect = 7e-23
Identities = 156/215 (73%), Gaps = 0/215 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||||||||| ||||| || ||||| |||| || ||||| ||| | |
Sbjct 352380 ATGCAAATTTTTGTTAAAACGTTAACTGGAAAAACCATCACACTGGAAGTAGAACCATCA 352321
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || | | || || || || ||||| || |||||||| || || ||
Sbjct 352320 GACACAATTGAAAACGTGAAGGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 352261
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|||||| | || |||||||| ||||| || || ||| | || | || |||||||||
Sbjct 352260 CAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 352201
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCG 22433
||||| ||||| ||| | ||||| ||||| ||
Sbjct 352200 ATTCAGAAAGAGAGTACCCTCCATTTGGTTTTACG 352166
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 22229 TTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACCGATACCGTGG 22288
||||||| || |||| |||||||| |||| || ||||| ||| | | || || | |
Sbjct 357451 TTGTTAAGACACTAACTGGTAAAACAATCACACTGGAAGTAGAACCGTCAGACACAATTG 357392
Query 22289 ACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAACAACGTCTTA 22348
| || | || || || || ||||| || |||||||| || || ||||||||| | |
Sbjct 357391 AAAATGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAACAACGTTTGA 357332
Query 22349 TATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAACATTCAAAAAG 22408
| ||||| || || || || || ||| | || | || |||||||||||||| ||||
Sbjct 357331 TTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACATTGTCTGATTACAACATTCAGAAAG 357272
Query 22409 AATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
| ||| | ||||| ||||| || | || ||||||
Sbjct 357271 AGAGTACCCTCCATTTGGTTTTACGTCTTCGTGGAGGT 357234
>seq428
Length=160056
Score = 152 bits (168), Expect = 4e-32
Identities = 171/229 (75%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 22218 GATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCAC 22277
||||||||| || || || |||||||| ||||| || ||||| | || || ||| | |
Sbjct 129443 GATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTC 129502
Query 22278 CGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCA 22337
|||||| | || || | || |||||| ||||| || || || |||||||| || ||
Sbjct 129503 CGATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCA 129562
Query 22338 ACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAA 22397
||||||||| || ||||| || ||||| || || ||| ||| || | || ||||||||
Sbjct 129563 ACAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAA 129622
Query 22398 CATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446
||| ||||| ||||| || | ||||| || || ||||| | ||||||
Sbjct 129623 CATCCAAAAGGAATCGACATTGCATTTGGTCTTAAGATTGAGGGGAGGT 129671
>seq25
Length=1883024
Score = 141 bits (156), Expect = 8e-29
Identities = 170/231 (74%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278
|||||||||||||| |||||| | ||||| ||||| |||| ||||| || ||| || |
Sbjct 1512251 ATGCAAATTTTTGTGAAAACTCTTACCGGAAAAACAATCACCCTTGAGGTTGAACCCTCA 1512192
Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338
|| || | || || | || || |||||||||||||| |||||||| || ||||||
Sbjct 1512191 GACACAATCGAAAATGTAAAGGCGAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 1512132
Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398
|| | | || || || || || || ||||| ||| ||| || | || || || |||
Sbjct 1512131 CAGAGGTTAATTTTCGCTGGTAAGCAATTAGAAGATGGCCGTACTCTTTCTGACTATAAC 1512072
Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTTT 22449
||||| |||||||| ||| |||| || || || || || | |||||| ||
Sbjct 1512071 ATTCAGAAAGAATCGACCTTACACTTGGTGTTACGTTTAAGAGGAGGTATT 1512021
>seq310
Length=366558
Score = 118 bits (130), Expect = 9e-22
Identities = 235/346 (68%), Gaps = 4/346 (1%)
Strand=Plus/Plus
Query 129511 TCGGCCAAACCTTGAATACCCACACCGATGGGTCGATGTTTTCTATTGGATTTTTGTGCC 129570
||||| |||||||| | ||| | || || |||| || | ||| || ||| |||
Sbjct 101241 TCGGCTAAACCTTGTACACCGATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCC 101300
Query 129571 GACAACAAGGGATAGTAGTTGATGTCTATAATTTTGTTTAAATTCTTGACCACAATTTTC 129630
| |||||| || || | ||| ||||||||||||| || || |||| |||
Sbjct 101301 TCTGGTACGGGATAATAATTAACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTG 101360
Query 129631 GTTACGTATTTTAACATTTCAAAATTGTACTCGCCTACATCGATGTCG--ACAAATTGAT 129688
|| | | ||||||| | | ||||| ||| | |||| | || ||||| ||
Sbjct 101361 GTGATTTCTTTTAACTTCTTAAAATCGTAGGATTTTCTATCG--GGCGTTACAAACATAT 101418
Query 129689 TGACACAAATCGAGGCCAAATTGCAGACGGCACTTTCGTTTTTGTCACTGTACTCGACAA 129748
| || || ||| |||||||| ||||| ||| ||||| | | | || || ||||
Sbjct 101419 TCACTGCAAGCGATGCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAA 101478
Query 129749 TTTCGGCGCACAAATTACTATTTTTAATGGTGCCCAAATGCTTTTGATTACTTTTCATGT 129808
|||| | ||| ||||| || || |||| || || || | | |||||| ||||| |||
Sbjct 101479 TTTCTGTGCATAAATTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGT 101538
Query 129809 TGCAAGCATCTTTGTACATCATGTACGGCGTGCCCGTTTCGACTTG 129854
|||| |||||||| || | |||| | || || || |||||||||||
Sbjct 101539 TGCATGCATCTTTATATAGCATGAAAGGAGTCCCAGTTTCGACTTG 101584
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 419707599645220
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |