Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq310 116 4e-21 seq218 107 2e-18 >seq310 Length=366558 Score = 116 bits (128), Expect = 4e-21 Identities = 471/734 (64%), Gaps = 6/734 (1%) Strand=Plus/Plus Query 153027 TGGTTGACCACTTGAAACTCGCCCGCCAACACTCGTCTCAAATATACATTGCTAGTGAAA 153086 |||||||| || ||| || || | || || ||||| ||||| ||| |||| | Sbjct 100854 TGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTATATAGATTCGAAGTGTAT 100913 Query 153087 GGTTCAAAGGATTCGTTATTGCCTAGTATTTGAGCCGTGGTTGCGGTCGGCATGTACGCC 153146 ||||| | ||||| ||||| || | ||||| || || | ||||| ||||| || Sbjct 100914 GGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAGCGGTAGGCATTGGGGCA 100973 Query 153147 ACCAACAAAGAATTCCGCAAGCCGTGCGCTCGAATGTCGTCCTTCAACGCCTGCCAATCC 153206 | | || ||||| | | |||| | ||| | | ||||| || ||||||| Sbjct 100974 AGAAGTAATGAATTTCTAATACCGTACTTAGCAATTTTCGCTTTCAAAGCACCCCAATCC 101033 Query 153207 CACAGCGCCGACGGTGTCGCGTTCCACATGTCGTACTGTAACA-CTCCTCGACTGGCGGG 153265 |||| | | || || |||||||| || |||||||| | | ||| | || | || Sbjct 101034 CACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAAATCCCCTTG-CTTACAGG 101092 Query 153266 ACTGCCGGCAAACGTACTGTAGCTGCCGTCGCGTTGGGCCAGTTCGCAGCTAGCCTCGAG 153325 ||| || || | || || || || | || | ||| ||||| || || || Sbjct 101093 ACTACCTTCATAAGTGGAATAAGGACCATCTTTCTCTGCGATTTCACAGCTTGCTTCAAG 101152 Query 153326 CGCGCCATAGTATATGGTTTCGGCGATTTGTTTATTGAGAACGGCCGCTTCTTCGCTCTC 153385 || || || || | |||||| ||||||| ||| || || ||||| ||| || Sbjct 101153 TGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTTTCGCAGCTTCAGGGCTGTC 101212 Query 153386 GTACGGCATGCGCAGCAGCACAAAGGCGTCGGCCAGACCCTGGATACCGACGCCGATGGG 153445 || | || || || | | ||| || ||||| | ||| || | ||||| || || || Sbjct 101213 ATAAGCTATACGAAGTAAAATAAAAGCATCGGCTAAACCTTGTACACCGATTCCAATCGG 101272 Query 153446 TCGATGCTTCTCGTTGCTGCGCCTCGCGCTC-GCTATGGGATAGTGATTGCGATCGATAA 153504 || ||| || | || | | || ||| | || |||||| | ||| ||||||| Sbjct 101273 TCTGTGCCTCACATTTGAGGTTTTGGC-CTCTGGTACGGGATAATAATTAACGTCGATAA 101331 Query 153505 TTTTGTTGAGGTTGCGCACCACCACTTTAGTTATCGCCTTAAGTTTCTCGAAATCATAGG 153564 ||||||| ||||| | || ||||| || || | || | |||| ||||| |||| Sbjct 101332 TTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTAACTTCTTAAAATCGTAGG 101391 Query 153565 TCATTTCGTCGACGCGT-ACGCATCGATTCACGGCAATAGACGCCAGATTACAGACGGCC 153623 || ||| |||| || | |||||| |||| || |||| ||||||||| || Sbjct 101392 ATTTTCTATCGG-GCGTTACAAACATATTCACTGCAAGCGATGCCAAATTACAGACCGCA 101450 Query 153624 GTCTCTTCGGCGTCGCTGTACTGCACGATCTCGGCGCAGAGGTTGCTGCATTTTATGACG 153683 || || | | | || | || || || | ||| | ||||||| | | || Sbjct 101451 ACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATAAATTGCTGCTTCTAATTGTT 101510 Query 153684 CCCAAATTTTGCTGATTGCTTTTGCGATTGCACGCGTCTTTGAAGAGCATGTACGGTCCG 153743 || || ||||| ||||||||||| | ||||| || ||||| | |||||| | || Sbjct 101511 CCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTTTATATAGCATGAAAGGAGTC 101570 Query 153744 CCGGTCTCGACTTG 153757 || || |||||||| Sbjct 101571 CCAGTTTCGACTTG 101584 >seq218 Length=661058 Score = 107 bits (118), Expect = 2e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||||||||||||||| | | || || |||||||| |||||||| Sbjct 356226 CCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAA 356285 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || || || | || || || | | | |||||||| |||||||| ||||| Sbjct 356286 AGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGA 356345 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAA-TTGTTCCACGGTGTCGGTCGACTCCAC 138566 |||||||| ||||| ||| |||| | ||||| | ||| | || || | | ||| || Sbjct 356346 ATACCTTCCTTGTC-TTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAAC 356404 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 || | || | || || ||||| ||||| |||||||| |||||||| Sbjct 356405 TTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452 Score = 93.3 bits (102), Expect = 4e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||| ||||| ||||| | | | ||| || ||||||||||| || | Sbjct 352154 CCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 352213 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| | || || | ||||||||||| | | || | ||| || ||||| ||||| Sbjct 352214 AAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGA 352273 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 |||||||||||||| ||| || || | | ||| | ||||| | | || || Sbjct 352274 ATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACT 352333 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATGGCT 138618 || | || | ||||| ||||| | ||||| |||||||| |||||| || Sbjct 352334 TCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCATGCCT 352384 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 || |||| | ||||||||||||||| | | | || || || || |||||||| || | Sbjct 356682 CCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGAC 356741 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || | || || || || || || | | | |||| | |||||||| || || Sbjct 356742 AATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGGA 356801 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGT-TTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 ||||| ||||| || ||| |||| | |||| | || | ||||| | || || || Sbjct 356802 ATACCCTCTTTATCT-TGAATTTTAGCCTTTACGTTCTCTATTGTGTCAGACGGTTCTAC 356860 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCAT 138614 ||| | || | ||||||||||| || || || |||||||||||||| Sbjct 356861 CTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496237661319360