Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq428 116 3e-21 seq218 109 4e-19 seq25 107 1e-18 >seq428 Length=160056 Score = 116 bits (128), Expect = 3e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || || | ||||||||| || ||||| | || || || ||||| ||||||||||| Sbjct 129670 CCTCCCCTCAATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGAC 129611 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | | | | ||||| |||||||| ||||| | || | ||| |||||||| |||| Sbjct 129610 AAAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGA 129551 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 |||||||| || || ||||| || ||| |||| || |||||| ||| || Sbjct 129550 ATTCCTTCTTTATCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACC 129491 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||| || ||||| ||||| || | ||| || || || |||||||| Sbjct 129490 TCTAAAGTGATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444 >seq218 Length=661058 Score = 109 bits (120), Expect = 4e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| |||||| | || ||||| || || || |||||||| || || |||||| | Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAG 356513 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || | | | ||||| | |||||| || || | || || | ||| || || |||| Sbjct 356514 AGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGA 356573 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| |||||| ||| ||| | || || ||||| ||| || Sbjct 356574 ATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACT 356633 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 ||||| || || |||||||| || || || || || |||||||||||| Sbjct 356634 TCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCATA 356681 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 ||||||| | | |||||| ||||| |||||| ||||| || ||||||||||| Sbjct 352154 CCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGAC 352213 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 | | |||| | ||||| |||||||| || || | |||||||| || ||||| ||| Sbjct 352214 AAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGA 352273 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||| ||||| || || || || |||| || || || |||||| Sbjct 352274 ATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACT 352333 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | || |||||||| || || | ||||| |||||||||||||| Sbjct 352334 TCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380 Score = 105 bits (116), Expect = 5e-18 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCGT 15022 ||||||||||||||||| || ||||| || |||||||||| | || || | || | | Sbjct 356697 AAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAAT--CAGACAATGTCCTACCAT 356754 Query 15023 CTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGT 15082 |||| | || |||||||| | || || | |||||||| |||||| || || || | Sbjct 356755 CTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGGAATACCCTCTTTAT 356814 Query 15083 CACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGG 15142 | |||||| ||||| | ||||| || || |||||| || | ||| || | Sbjct 356815 CTTGAATTTTAGCCTTTACGTTCTCTATTGTGTCAGACGGTTCTACCTCAAGGGTGATTG 356874 Query 15143 TTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||||||| || || || || |||||||| ||||| Sbjct 356875 TTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 14965 AAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCT 15024 ||||||||||| || || || |||||||| || ||||| || || | | | ||| Sbjct 356241 AAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCT 356300 Query 15025 TCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCA 15084 ||||| || || ||||| | || | ||| |||||||| ||||| ||||||||||| Sbjct 356301 TCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCT 356360 Query 15085 CAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTT 15144 |||||| ||| || |||| || ||||| || || |||| || ||||| Sbjct 356361 TGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGTC 356420 Query 15145 TTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || || || ||||| |||||||| || ||||| Sbjct 356421 TTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452 Score = 100 bits (110), Expect = 2e-16 Identities = 159/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 |||||||| | || || || ||||| | ||||| || || || || || ||||| Sbjct 355998 CCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAA 356057 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || ||| | ||||| || ||||| || || | || | ||| ||||| || ||| Sbjct 356058 AGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGG 356117 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||||||| ||| || ||||||| ||||| ||||| Sbjct 356118 ATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACT 356177 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATA 15177 || | ||| || |||||||| || | ||||| || || ||||||||| Sbjct 356178 TCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCATA 356225 Score = 98.7 bits (108), Expect = 7e-16 Identities = 146/205 (71%), Gaps = 4/205 (2%) Strand=Plus/Plus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAA--TTCTCGCG 15021 |||||| ||||| |||||| ||||| || |||||||||| | || || |||| | Sbjct 357249 TAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAAT--CAGACAATGTTCTACCA 357306 Query 15022 TCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTG 15081 ||||| ||||| || ||||| | |||||||| |||||||| ||||| ||||| ||| Sbjct 357307 TCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTG 357366 Query 15082 TCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATG 15141 || || ||| || ||| |||| || || || |||||| || | || || Sbjct 357367 TCCTGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCTACTTCCAGTGTGATT 357426 Query 15142 GTTTTACCTGTCAGAGTTTTTACAA 15166 |||||||| || || || || |||| Sbjct 357427 GTTTTACCAGTTAGTGTCTTAACAA 357451 >seq25 Length=1883024 Score = 107 bits (118), Expect = 1e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || |||| || | ||| || || || | ||| || ||||| || ||||| || || Sbjct 1512025 CCTCCTCTTAAACGTAACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAA 1512084 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 ||| | | | ||||||||||| || |||||| | || || | |||||| || ||| Sbjct 1512085 AGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGA 1512144 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| ||| || |||||| |||| || || || ||| || Sbjct 1512145 ATACCTTCCTTGTCTTGAATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACC 1512204 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 || | ||| || ||||| || || |||||||| |||||||||||||| Sbjct 1512205 TCAAGGGTGATTGTTTTTCCGGTAAGAGTTTTCACAAAAATTTGCAT 1512251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357374629408580