Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq218 93.3 4e-14 >seq218 Length=661058 Score = 93.3 bits (102), Expect = 4e-14 Identities = 153/217 (71%), Gaps = 4/217 (2%) Strand=Plus/Plus Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958 ||||| || ||||| | || || ||||||||||||||||| || | |||||| | Sbjct 356238 CGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCA 356297 Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018 || |||| ||| || ||||| | || | || || || || ||||| || || |||||| Sbjct 356298 TCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTG 356357 Query 127019 TCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076 | | ||| ||| |||| | ||| ||| | || || | ||| ||||| | || | Sbjct 356358 T-CTTGAATTTTAGCTTTAACGTT-TTCAATTGTATCAGATGGCTCAACTTCTAGAGTGA 356415 Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || ||||| |||||||| |||||||| Sbjct 356416 TGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452 Score = 93.3 bits (102), Expect = 4e-14 Identities = 148/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||||||| | || || |||||||||||||| |||||| | || ||| ||| || Sbjct 356472 ACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACCATCTTCC 356531 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || |||||||| || |||| || | ||||||||| || || ||||| || |||| | || Sbjct 356532 AGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTTGT-CTTG 356590 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | ||| ||| || | | || | || || | || ||||| | || | |||||| Sbjct 356591 AATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACTTCTAAAGTGATCGTTTT 356650 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 || || || || || || ||||| ||||| Sbjct 356651 ACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475477096285120