Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq218 93.3 4e-14
>seq218
Length=661058
Score = 93.3 bits (102), Expect = 4e-14
Identities = 153/217 (71%), Gaps = 4/217 (2%)
Strand=Plus/Plus
Query 126899 CGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAA 126958
||||| || ||||| | || || ||||||||||||||||| || | |||||| |
Sbjct 356238 CGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCA 356297
Query 126959 TCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTG 127018
|| |||| ||| || ||||| | || | || || || || ||||| || || ||||||
Sbjct 356298 TCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTG 356357
Query 127019 TCCGTGATTTTCTGCTTGA--GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCA 127076
| | ||| ||| |||| | ||| ||| | || || | ||| ||||| | || |
Sbjct 356358 T-CTTGAATTTTAGCTTTAACGTT-TTCAATTGTATCAGATGGCTCAACTTCTAGAGTGA 356415
Query 127077 CCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || || ||||| |||||||| ||||||||
Sbjct 356416 TGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452
Score = 93.3 bits (102), Expect = 4e-14
Identities = 148/210 (70%), Gaps = 2/210 (1%)
Strand=Plus/Plus
Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964
|||||||| | || || |||||||||||||| |||||| | || ||| ||| ||
Sbjct 356472 ACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACCATCTTCC 356531
Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024
|| |||||||| || |||| || | ||||||||| || || ||||| || |||| | ||
Sbjct 356532 AGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTTGT-CTTG 356590
Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083
| ||| ||| || | | || | || || | || ||||| | || | ||||||
Sbjct 356591 AATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACTTCTAAAGTGATCGTTTT 356650
Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
|| || || || || || ||||| |||||
Sbjct 356651 ACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475477096285120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |