Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq310 217 1e-51
seq218 127 2e-24
seq428 105 6e-18
seq44 102 7e-17
>seq310
Length=366558
Score = 217 bits (240), Expect = 1e-51
Identities = 965/1514 (64%), Gaps = 37/1514 (2%)
Strand=Plus/Minus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAA--CGGATAT-TTGaaaaaaaTCGAGGAA 122897
||||| |||||||| | ||||| |||||| || || | |||||| | || |||
Sbjct 102346 TACAATTATTTTGGTTTTAAAACTTTAGAACGTTCGTATCTCTTGAAAGTCAACG--GAA 102289
Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957
|| ||| |||| | |||||| ||||| ||||| || ||| | ||| | |||
Sbjct 102288 AAA-TCGTCGAAAGACCTCAACACATGCTTATGCGAGTTGCTGTGGGCATTCACTATAAA 102230
Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017
|| || || ||| | ||||| ||| |||| ||||| | ||||||||| || ||
Sbjct 102229 GATATAGATGCCGCAATAGAAACGTACAATTTAATGTCAGATCGATTTTTCACACATGCA 102170
Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077
||||| ||| ||||| | || || || | |||||| | || |||||||| ||| |
Sbjct 102169 AGTCCTACTCTGTTCTCAGCTGGGACCACAAGACCTCAGCTTTCATCGTGTTTCTTGGTA 102110
Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCG--CGATTGCGCGTTGA 123135
| ||| || || ||||| || || | | || |||| | | ||| | | |
Sbjct 102109 GCAATGCCTGATGATAGCATTGAAGGCATTTGTAAATGTTTGACTACAAGTGCTC--TCA 102052
Query 123136 TTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCC 123195
|||| |||| | || || | ||| | | ||||||| | || | | || ||
Sbjct 102051 TTTCTAAATCGGCAGGTGGTTTGGGCATAAGCGTGCACAATATACGTGCTAAAGGTAGTT 101992
Query 123196 GCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATA 123255
||| | ||||| |||| | | ||| | | | ||||| || |||| ||||
Sbjct 101991 TCATAGCAGGCACCAACGGCACTTCGAACGGTTTAGTTCCTATGCTTCGTGTTTTTAATA 101932
Query 123256 ACGCCGTGCGGCACGTCGACCAGGGCGGCAAACGCAAA---GGCGCGATGGCGATCTATC 123312
| | | | || || || || || || | | || || | || |||||||
Sbjct 101931 ATTTAGCCAGATATGTAGATCAAGGAGGTAACAAGAGACCTGGTGCTTTTGCTATCTATC 101872
Query 123313 TAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGG 123372
| ||||| ||||| | || | | || ||||||||||| ||| || | || |
Sbjct 101871 TTGAACCATGGCATGCAGACATATTTGAATTTTTAAATTTGAAAAAAAATACAGGAAAAG 101812
Query 123373 AAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGAC 123432
|||| | || ||| | |||||||| || || ||||| |||| |||||||||||| |
Sbjct 101811 AAGAGATGAGAGCAAGAGATTTGTTTTATGCCCTATGGATACCAGATTTGTTTATGAAAA 101752
Query 123433 GCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGG-CTTGAGC 123491
| || || | | || ||||| || |||||||| ||| |||||||| ||| | |
Sbjct 101751 GAGTTGAACAAAATGGGCACTGGTCACTGATGTGTCCTCATCAATGTCCCGGACTTTA-C 101693
Query 123492 GACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAG 123551
|| || || | ||||||| ||||||| | | || || ||||| ||| |
Sbjct 101692 GATAATTGGGGAGAAAAGTTTGAACAGTTGTATGAAAAGTATGAAGCAGAAGGTAAATAC 101633
Query 123552 GTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACC 123611
|| ||| || || || | | |||| | ||| || | | |||||||||||
Sbjct 101632 ATTTCTCAAGTACCTGCTCAGAAATTGTGGCATGCTATAATTGTTTCTCAAGTCGAAACT 101573
Query 123612 GGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTG 123671
|| || || | |||||| || ||||| || |||||||| |||| |||||| |||||
Sbjct 101572 GGGACTCCTTTCATGCTATATAAAGATGCATGCAACAGAAAAAGCAATCAACAAAACTTA 101513
Query 123672 GGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAA 123731
|||||||| | | | || ||| | ||| | |||||| | ||||| | | || ||
Sbjct 101512 GGAACAATTAGAAGCAGCAATTTATGCACAGAAATTGTTGAATATACTTCCCCTGACGAA 101453
Query 123732 GTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAAT-CGTT------GC---GTCGAAAA 123781
|| || || ||||||||||| ||| || |||||| ||| || | |||||
Sbjct 101452 GTTGCGGTCTGTAATTTGGCATCGCTTGCAGTGAATATGTTTGTAACGCCCGATAGAAAA 101393
Query 123782 --CGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTG 123839
| || ||||| | | | | ||| || || ||| ||| || || |
Sbjct 101392 TCCTACGATTTTA------AGAAGTTAAAAGAAATCACCAAAGTTGTTACGAAAAACCTA 101339
Query 123840 AACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAA 123899
|||||||||||||| ||||||| |||||| | || || || ||| |||
Sbjct 101338 AACAAAATTATCGACGTTAATTATTATCCCGTACCAGAGGCCAAAACCTCAAATGTGAGG 101279
Query 123900 CACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATG 123959
||||||||| | ||| | || | ||||| || ||||| || ||| | | || || ||
Sbjct 101278 CACAGACCGATTGGAATCGGTGTACAAGGTTTAGCCGATGCTTTTATTTTACTTCGTATA 101219
Query 123960 CCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTAC 124019
| || || ||| ||||| | |||||| ||||| |||||| | ||||||
Sbjct 101218 GCTTATGACAGCCCTGAAGCTGCGAAACTTAATCAACAAATTTTCGAAACTTTGTATTAC 101159
Query 124020 GGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCG 124079
|| || | || || ||||| ||| | || | | | || | || | ||| |
Sbjct 101158 GGTGCACTTGAAGCAAGCTGTGAAATCGCAGAGAAAGATGGTCCTTATTCCACTTATGAA 101099
Query 124080 GGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAAT 124139
|| || || | ||| || ||||| ||||| || ||||||||| || || ||| |
Sbjct 101098 GGTAGTCCTGTAAGCAAGGGGATTTTACAGTATGATATGTGGAATAAAACTCCCACAGAC 101039
Query 124140 TTGTGGGACTGGAGCGTTTTAAAACAACGCATAT--CGACGCACGGTTTGCGTAACTCGC 124197
|||||||| ||| | | ||| || | || | || | | | ||||| | | || ||
Sbjct 101038 TTGTGGGATTGGGGTGCTTTGAA--AGCGAAAATTGCTAAGTACGGTATTAGAAATTCAT 100981
Query 124198 TGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCT 124257
| | | || ||||| || || | || || |||||||| || || || |||||
Sbjct 100980 TACTTCTTGCCCCAATGCCTACCGCTTCAACAGCCCAAATTTTGGGTAATAATGAATCTG 100921
Query 124258 TCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGA 124317
| || || | |||| ||| | || |||| || ||| | || || ||| ||
Sbjct 100920 TAGAACCATACACTTCGAATCTATATACAAGACGCGTTTTATCTGGAGAATTTTTCGTTG 100861
Query 124318 TAAATCATCATTTG 124331
| || |||||||||
Sbjct 100860 TCAACCATCATTTG 100847
>seq218
Length=661058
Score = 127 bits (140), Expect = 2e-24
Identities = 166/230 (72%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|||||||| | | || | || | ||| || || ||||| ||||| ||||||||||||
Sbjct 356451 ATTCCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCG 356510
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
|| ||| | ||| |||| |||||||||||| | || || | ||||| || ||
Sbjct 356511 GAGAGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGT 356570
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|||||||||||||| |||||||||||| ||| | || | || || || | ||
Sbjct 356571 GGAATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCA 356630
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| | ||| | |||||| || || || || || || |||||||||||
Sbjct 356631 ACTTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 113 bits (124), Expect = 4e-20
Identities = 163/230 (71%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || || |||||||| || | ||| | || |||||||| || |||||||||||
Sbjct 355995 ATACCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCT 356054
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| |||| ||| ||||| ||||| || || | || | ||||| || || ||
Sbjct 356055 GAAAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGT 356114
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
|| || ||||| || ||||||||||| ||||| ||||| || || || | |||
Sbjct 356115 GGGATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCT 356174
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| || || | ||||| || |||| ||||| || || ||||||||
Sbjct 356175 ACTTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 104 bits (114), Expect = 2e-17
Identities = 161/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| || || | ||| | ||| |||| |||||| || ||||| ||||| ||||| || ||
Sbjct 356223 ATACCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCA 356282
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| ||| | ||| || || || || || || | || | ||||| ||||| ||
Sbjct 356283 GAAAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGA 356342
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290
||||| ||||| || ||||||||||| ||| | ||| | || || || | |||
Sbjct 356343 GGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCA 356402
Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
||||| ||||| | || || || || ||||| |||||||| || |||||
Sbjct 356403 ACTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452
Score = 98.7 bits (108), Expect = 9e-16
Identities = 120/164 (73%), Gaps = 0/164 (0%)
Strand=Plus/Plus
Query 45177 GTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATG 45236
||| || ||| ||||||||||| || || | ||||| ||||||||||| || |||||
Sbjct 352217 GTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATA 352276
Query 45237 CCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCG 45296
|||||||| || || || || || | ||| | ||||| || | || |||||
Sbjct 352277 CCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCC 352336
Query 45297 AGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || | ||||| || |||| ||||| ||||||||||||||
Sbjct 352337 AGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Score = 98.7 bits (108), Expect = 9e-16
Identities = 162/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170
|| ||||| | || | ||| |||| ||| || || ||||| || ||||| || |||||
Sbjct 356679 ATACCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCA 356738
Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230
| || || ||| || | || || || || | || |||| ||| ||||| ||
Sbjct 356739 GACAATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGT 356798
Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289
||||| || ||||||||||||||||| || | || | |||| ||||| || | ||
Sbjct 356799 GGAATACCCTCTTTATCTTGAATTTTAGCCTTTA-CGTTCTCTATTGTGTCAGACGGTTC 356857
Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || || | ||||| || ||||| || || |||||||| |||||
Sbjct 356858 TACCTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908
>seq428
Length=160056
Score = 105 bits (116), Expect = 6e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|| || || | ||||| || |||||||||||||| || ||||| | || |
Sbjct 129658 CTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCA 129599
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||||||||| || | || | ||||| ||||| || ||||| |||||||||
Sbjct 129598 TCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTA 129539
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| |||||| || | ||| | || ||||| | ||||| || | ||| |
Sbjct 129538 TCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATG 129479
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || || |||| ||| || || || |||||||||
Sbjct 129478 GTCTTACCCGTTAAAGTCTTCACGAATATTTGCATC 129443
>seq44
Length=1668621
Score = 102 bits (112), Expect = 7e-17
Identities = 118/159 (74%), Gaps = 0/159 (0%)
Strand=Plus/Minus
Query 102357 GCTTCAACGTTTCCCAAGTCGCCGACGTGCCGTATGATTGAATCGGGCGCACCATGATCC 102416
||||| |||||||| | ||||| ||||| | | | || ||| || || ||||||||
Sbjct 466054 GCTTCTACGTTTCCAAGATCGCCAACGTGTCTCACGTCTGCATCAGGAGCTCCATGATCT 465995
Query 102417 ATGTTGAACGGATTGAAATGTTCGCCGGCCGAGGTGCATCCGTTGCTCATGTCTCCGAAT 102476
|||| |||||||||||| | ||||| || | || |||||| | |||| || |||
Sbjct 465994 TTGTTATGCGGATTGAAATGAGCACCGGCTGAAATACAGCCGTTGGTGTTGTCACCAAAT 465935
Query 102477 TCGTGAACGTGAAAGCCGTGCAAACCTTTCGACAAACCG 102515
||||| || ||||| ||||| | ||||||| ||| |||
Sbjct 465934 TCGTGCACATGAAATCCGTGGAGTCCTTTCGTCAACCCG 465896
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451980667640480
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