Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq310 217 1e-51 seq218 127 2e-24 seq428 105 6e-18 seq44 102 7e-17 >seq310 Length=366558 Score = 217 bits (240), Expect = 1e-51 Identities = 965/1514 (64%), Gaps = 37/1514 (2%) Strand=Plus/Minus Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAA--CGGATAT-TTGaaaaaaaTCGAGGAA 122897 ||||| |||||||| | ||||| |||||| || || | |||||| | || ||| Sbjct 102346 TACAATTATTTTGGTTTTAAAACTTTAGAACGTTCGTATCTCTTGAAAGTCAACG--GAA 102289 Query 122898 AAGGTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGC 122957 || ||| |||| | |||||| ||||| ||||| || ||| | ||| | ||| Sbjct 102288 AAA-TCGTCGAAAGACCTCAACACATGCTTATGCGAGTTGCTGTGGGCATTCACTATAAA 102230 Query 122958 GACATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCG 123017 || || || ||| | ||||| ||| |||| ||||| | ||||||||| || || Sbjct 102229 GATATAGATGCCGCAATAGAAACGTACAATTTAATGTCAGATCGATTTTTCACACATGCA 102170 Query 123018 AGTCCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTC 123077 ||||| ||| ||||| | || || || | |||||| | || |||||||| ||| | Sbjct 102169 AGTCCTACTCTGTTCTCAGCTGGGACCACAAGACCTCAGCTTTCATCGTGTTTCTTGGTA 102110 Query 123078 ACCTTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCG--CGATTGCGCGTTGA 123135 | ||| || || ||||| || || | | || |||| | | ||| | | | Sbjct 102109 GCAATGCCTGATGATAGCATTGAAGGCATTTGTAAATGTTTGACTACAAGTGCTC--TCA 102052 Query 123136 TTTCCAAATTTGGCGGCGGCATAGGCGTGAACGTGCACGACGTAAGAGGCCGCGGAAGCC 123195 |||| |||| | || || | ||| | | ||||||| | || | | || || Sbjct 102051 TTTCTAAATCGGCAGGTGGTTTGGGCATAAGCGTGCACAATATACGTGCTAAAGGTAGTT 101992 Query 123196 GCATCAGAAGCACCGACGGAATCGCCTCCGGGCTCGAATCCATGCTGCGAGTTTACAATA 123255 ||| | ||||| |||| | | ||| | | | ||||| || |||| |||| Sbjct 101991 TCATAGCAGGCACCAACGGCACTTCGAACGGTTTAGTTCCTATGCTTCGTGTTTTTAATA 101932 Query 123256 ACGCCGTGCGGCACGTCGACCAGGGCGGCAAACGCAAA---GGCGCGATGGCGATCTATC 123312 | | | | || || || || || || | | || || | || ||||||| Sbjct 101931 ATTTAGCCAGATATGTAGATCAAGGAGGTAACAAGAGACCTGGTGCTTTTGCTATCTATC 101872 Query 123313 TAGAACCGTGGCACGTTGATGTGTACGATTTTTTAAATTTAAAACGCAACATGGGGGCGG 123372 | ||||| ||||| | || | | || ||||||||||| ||| || | || | Sbjct 101871 TTGAACCATGGCATGCAGACATATTTGAATTTTTAAATTTGAAAAAAAATACAGGAAAAG 101812 Query 123373 AAGAAAAGAAAGCCCGCGATTTGTTGTACGCTTTATGGGTACCCGATTTGTTTATGCGAC 123432 |||| | || ||| | |||||||| || || ||||| |||| |||||||||||| | Sbjct 101811 AAGAGATGAGAGCAAGAGATTTGTTTTATGCCCTATGGATACCAGATTTGTTTATGAAAA 101752 Query 123433 GCGTAAAAGACGACGGCGTGTGGTCGCTCATGTGTCCCGATCGGTGTCCCGG-CTTGAGC 123491 | || || | | || ||||| || |||||||| ||| |||||||| ||| | | Sbjct 101751 GAGTTGAACAAAATGGGCACTGGTCACTGATGTGTCCTCATCAATGTCCCGGACTTTA-C 101693 Query 123492 GACGTTTACGGCAATCAGTTTGACGAGTTGTACGCGCAATACGAGCGCGAAGGCAAACAG 123551 || || || | ||||||| ||||||| | | || || ||||| ||| | Sbjct 101692 GATAATTGGGGAGAAAAGTTTGAACAGTTGTATGAAAAGTATGAAGCAGAAGGTAAATAC 101633 Query 123552 GTTAGTCAGGTTCCGGCACGTGATTTGTTCAAATTTATTATCGAAACACAAGTCGAAACC 123611 || ||| || || || | | |||| | ||| || | | ||||||||||| Sbjct 101632 ATTTCTCAAGTACCTGCTCAGAAATTGTGGCATGCTATAATTGTTTCTCAAGTCGAAACT 101573 Query 123612 GGAACGCCGTACATGCTCTACAAAGACGCCTGCAACAGGAAAACCAATCAGAGCAACTTG 123671 || || || | |||||| || ||||| || |||||||| |||| |||||| ||||| Sbjct 101572 GGGACTCCTTTCATGCTATATAAAGATGCATGCAACAGAAAAAGCAATCAACAAAACTTA 101513 Query 123672 GGAACAATAAAATGTAGTAATCTTTGCTCCGAAATTATCGAATACAGCGATGCCGATCAA 123731 |||||||| | | | || ||| | ||| | |||||| | ||||| | | || || Sbjct 101512 GGAACAATTAGAAGCAGCAATTTATGCACAGAAATTGTTGAATATACTTCCCCTGACGAA 101453 Query 123732 GTGGCCGTGTGTAATTTGGCTTCGATTTGCGTGAAT-CGTT------GC---GTCGAAAA 123781 || || || ||||||||||| ||| || |||||| ||| || | ||||| Sbjct 101452 GTTGCGGTCTGTAATTTGGCATCGCTTGCAGTGAATATGTTTGTAACGCCCGATAGAAAA 101393 Query 123782 --CGGCGCTTTTAATTTCCAAACGCTCAAACGCATAACAAAAACTGTAGTAAAGAATTTG 123839 | || ||||| | | | | ||| || || ||| ||| || || | Sbjct 101392 TCCTACGATTTTA------AGAAGTTAAAAGAAATCACCAAAGTTGTTACGAAAAACCTA 101339 Query 123840 AACAAAATTATCGATGTTAATTTTTATCCTTTGGAGGAAGCGCGTTTGTCTAATTTGAAA 123899 |||||||||||||| ||||||| |||||| | || || || ||| ||| Sbjct 101338 AACAAAATTATCGACGTTAATTATTATCCCGTACCAGAGGCCAAAACCTCAAATGTGAGG 101279 Query 123900 CACAGACCGGTCGGAGTGGGCATTCAAGGGTTGGCCGACGCGTTTGTAATGCTGCGCATG 123959 ||||||||| | ||| | || | ||||| || ||||| || ||| | | || || || Sbjct 101278 CACAGACCGATTGGAATCGGTGTACAAGGTTTAGCCGATGCTTTTATTTTACTTCGTATA 101219 Query 123960 CCGTACGAAAGCGACGAAGCAAAGTTGCTTAATACGCAAATAGCCGAAACAATTTATTAC 124019 | || || ||| ||||| | |||||| ||||| |||||| | |||||| Sbjct 101218 GCTTATGACAGCCCTGAAGCTGCGAAACTTAATCAACAAATTTTCGAAACTTTGTATTAC 101159 Query 124020 GGCGCTTTGGAGGCGAGCTGCGAACTTGCGAAAATTCACGGCGCGTACGAAAGTTACGCG 124079 || || | || || ||||| ||| | || | | | || | || | ||| | Sbjct 101158 GGTGCACTTGAAGCAAGCTGTGAAATCGCAGAGAAAGATGGTCCTTATTCCACTTATGAA 101099 Query 124080 GGCAGCCCGGCGAGCCGAGGTATTTTGCAGTACGACATGTGGAATGCTACACCGACAAAT 124139 || || || | ||| || ||||| ||||| || ||||||||| || || ||| | Sbjct 101098 GGTAGTCCTGTAAGCAAGGGGATTTTACAGTATGATATGTGGAATAAAACTCCCACAGAC 101039 Query 124140 TTGTGGGACTGGAGCGTTTTAAAACAACGCATAT--CGACGCACGGTTTGCGTAACTCGC 124197 |||||||| ||| | | ||| || | || | || | | | ||||| | | || || Sbjct 101038 TTGTGGGATTGGGGTGCTTTGAA--AGCGAAAATTGCTAAGTACGGTATTAGAAATTCAT 100981 Query 124198 TGTTGGTGGCGTACATGCCGACGGCAACCACTGCTCAAATTTTAGGAAACAACGAATCCT 124257 | | | || ||||| || || | || || |||||||| || || || ||||| Sbjct 100980 TACTTCTTGCCCCAATGCCTACCGCTTCAACAGCCCAAATTTTGGGTAATAATGAATCTG 100921 Query 124258 TCGAGCCGTTCACTAACAATTTGTACGTGCGACGAGTGTTAGCCGGCGATTTTCAAGTGA 124317 | || || | |||| ||| | || |||| || ||| | || || ||| || Sbjct 100920 TAGAACCATACACTTCGAATCTATATACAAGACGCGTTTTATCTGGAGAATTTTTCGTTG 100861 Query 124318 TAAATCATCATTTG 124331 | || ||||||||| Sbjct 100860 TCAACCATCATTTG 100847 >seq218 Length=661058 Score = 127 bits (140), Expect = 2e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | | || | || | ||| || || ||||| ||||| |||||||||||| Sbjct 356451 ATTCCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCG 356510 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || ||| | ||| |||| |||||||||||| | || || | ||||| || || Sbjct 356511 GAGAGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGT 356570 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||||||||| |||||||||||| ||| | || | || || || | || Sbjct 356571 GGAATGCCTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCA 356630 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| | ||| | |||||| || || || || || || ||||||||||| Sbjct 356631 ACTTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || || |||||||| || | ||| | || |||||||| || ||||||||||| Sbjct 355995 ATACCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCT 356054 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | |||| ||| ||||| ||||| || || | || | ||||| || || || Sbjct 356055 GAAAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGT 356114 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 || || ||||| || ||||||||||| ||||| ||||| || || || | ||| Sbjct 356115 GGGATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCT 356174 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | ||||| || |||| ||||| || || |||||||| Sbjct 356175 ACTTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || || || | ||| | ||| |||| |||||| || ||||| ||||| ||||| || || Sbjct 356223 ATACCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCA 356282 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | ||| | ||| || || || || || || | || | ||||| ||||| || Sbjct 356283 GAAAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGA 356342 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||| ||||| || ||||||||||| ||| | ||| | || || || | ||| Sbjct 356343 GGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCA 356402 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | || || || || ||||| |||||||| || ||||| Sbjct 356403 ACTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452 Score = 98.7 bits (108), Expect = 9e-16 Identities = 120/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 45177 GTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATG 45236 ||| || ||| ||||||||||| || || | ||||| ||||||||||| || ||||| Sbjct 352217 GTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATA 352276 Query 45237 CCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCG 45296 |||||||| || || || || || | ||| | ||||| || | || ||||| Sbjct 352277 CCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCC 352336 Query 45297 AGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||||| || |||| ||||| |||||||||||||| Sbjct 352337 AGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380 Score = 98.7 bits (108), Expect = 9e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||| | || | ||| |||| ||| || || ||||| || ||||| || ||||| Sbjct 356679 ATACCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCA 356738 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || || ||| || | || || || || | || |||| ||| ||||| || Sbjct 356739 GACAATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGT 356798 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| || ||||||||||||||||| || | || | |||| ||||| || | || Sbjct 356799 GGAATACCCTCTTTATCTTGAATTTTAGCCTTTA-CGTTCTCTATTGTGTCAGACGGTTC 356857 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || || || | ||||| || ||||| || || |||||||| ||||| Sbjct 356858 TACCTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908 >seq428 Length=160056 Score = 105 bits (116), Expect = 6e-18 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185 || || || | ||||| || |||||||||||||| || ||||| | || | Sbjct 129658 CTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCA 129599 Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245 || |||||||||||||| || | || | ||||| ||||| || ||||| ||||||||| Sbjct 129598 TCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTA 129539 Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305 ||||| |||||| || | ||| | || ||||| | ||||| || | ||| | Sbjct 129538 TCTTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATG 129479 Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341 || || || |||| ||| || || || ||||||||| Sbjct 129478 GTCTTACCCGTTAAAGTCTTCACGAATATTTGCATC 129443 >seq44 Length=1668621 Score = 102 bits (112), Expect = 7e-17 Identities = 118/159 (74%), Gaps = 0/159 (0%) Strand=Plus/Minus Query 102357 GCTTCAACGTTTCCCAAGTCGCCGACGTGCCGTATGATTGAATCGGGCGCACCATGATCC 102416 ||||| |||||||| | ||||| ||||| | | | || ||| || || |||||||| Sbjct 466054 GCTTCTACGTTTCCAAGATCGCCAACGTGTCTCACGTCTGCATCAGGAGCTCCATGATCT 465995 Query 102417 ATGTTGAACGGATTGAAATGTTCGCCGGCCGAGGTGCATCCGTTGCTCATGTCTCCGAAT 102476 |||| |||||||||||| | ||||| || | || |||||| | |||| || ||| Sbjct 465994 TTGTTATGCGGATTGAAATGAGCACCGGCTGAAATACAGCCGTTGGTGTTGTCACCAAAT 465935 Query 102477 TCGTGAACGTGAAAGCCGTGCAAACCTTTCGACAAACCG 102515 ||||| || ||||| ||||| | ||||||| ||| ||| Sbjct 465934 TCGTGCACATGAAATCCGTGGAGTCCTTTCGTCAACCCG 465896 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451980667640480