Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq12 109 6e-19 seq310 93.3 5e-14 >seq12 Length=2314596 Score = 109 bits (120), Expect = 6e-19 Identities = 286/423 (68%), Gaps = 10/423 (2%) Strand=Plus/Minus Query 119207 ATAGTCACCCACCCTCTTTTCGAAGAAATTCGTCTTACCATCGAGTG-AGATGTTTTCCA 119265 ||| ||||| || ||||||| |||||||| ||||| ||||| |||| | || || | || Sbjct 282082 ATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATC-AGTGGAAATTTTGTTCA 282024 Query 119266 TAAAGTCAAAAGGATTTTTGGAGTTCCAGAT-TGGTGGTTGACCAACTTGTTTCAGAAGA 119324 |||||||||| ||||| || || | || | | |||||| | | |||| Sbjct 282023 TAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAACTCTACTAA-AAGA 281965 Query 119325 CGATCGGAGACATACTCGATATATTCGGACATCTTTTCCGAATTCATACCTATGAGA-TT 119383 || || | ||| | |||||||| | |||||| || |||||||||| || || || Sbjct 281964 CGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATACCAATTAGGCTT 281905 Query 119384 ACACGGGAGAGCATCGAGGATGAAGTTCTTCTCGATCTCCACAGCTTCTTTCACGATGGA 119443 ||| || | |||||| | || | || || || | || || || | || Sbjct 281904 ACA-GGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCGCGAATTATATC 281846 Query 119444 -GTGAATAGTTTCTGTCGATGGTTTGTTTCTCAAGAGTTTAAACAACTCTACG-GCAAAT 119501 || | | | | || | |||||||| || ||| | ||| | | || ||||| Sbjct 281845 TGTTACTCGCT-CTTTTGATGGTTT-TTGAACAATATAAGAAAACATTAAACAAGCAAAA 281788 Query 119502 TCTTGATGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATG 119561 || ||| | |||||||| ||||| || ||||||||| || ||||| ||||| Sbjct 281787 TCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCAGTCCTGGCATA 281728 Query 119562 AGTCCTCTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCC 119621 || || | |||||| ||||||||||| ||| ||||||||| |||||||| || || ||| Sbjct 281727 AGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGAAAATTCCTTCC 281668 Query 119622 ACA 119624 ||| Sbjct 281667 ACA 281665 >seq310 Length=366558 Score = 93.3 bits (102), Expect = 5e-14 Identities = 282/424 (67%), Gaps = 14/424 (3%) Strand=Plus/Plus Query 109413 ATAATACATACCCGTTTTGAGACCAGCCTTCCATGCGTACATATGCATTGAAGAGAGTT- 109471 |||||||||||| ||||| | || ||||||| | || | ||| || || || | | Sbjct 100556 ATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAATGAATGGACGACATTAC 100615 Query 109472 TGGAAAGTGTCGGACTCTCCATAAACAAGTTCATCGACTGAGACTGATCGATGAATCGAC 109531 | || ||| | || | || ||| | || | ||||| ||| || || || | Sbjct 100616 TTGATAGTTT-GGCTTTTCAATATGAATATTTAAAGACTGGCTCTGGTCAATAAAGGCTC 100674 Query 109532 CACGATCAGCCGCCATGTCGATGATACACTTT-TGGCTAATTTCCCAGACAGTCTTGTAC 109590 ||||||| |||||||||| | || ||||| || ||||||||| ||||| || || Sbjct 100675 CACGATCTGCCGCCATGTTTAAAATT-ACTTTCTGTGAAATTTCCCACACAGTTTTATAT 100733 Query 109591 AAATTCTTGATATCATCGGGAATGTCCACG-ATGTTTTGAATAGAGCCACCA--GCCTTC 109647 | || || |||||||||||||| ||| | || |||||||| ||||||| | | | Sbjct 100734 ATCTTTTTCATATCATCGGGAAT-TCCTGGAATATTTTGAATTGAGCCACAATTGGCAAG 100792 Query 109648 ACCATGAGATCCTTCATCTCTTTCGACCAGAGACCGACCTTTTTGAGATCGTCAACAAGA 109707 | | | | | |||||| | | ||| || || | || | | ||| || | | Sbjct 100793 AACCT--GGTTTTTCATCACGTCATCCCACAGTCCTAACTCAGTCAAATCTCTAAGCAAA 100850 Query 109708 TGCTTGTTGACCACGACAAATTCACCAGCAAGTGTGCGTC--GGAGGTAGATGTTAGTCG 109765 || | |||||| |||| |||||| |||| | ||||| | | |||| || | | Sbjct 100851 TGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCTTGTATATAGA--TTCGAAG 100908 Query 109766 TGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAGCTGTGGGCATGG 109825 |||| ||||| | | | ||||| || || | ||||| || || ||||| || ||||| | Sbjct 100909 TGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGTTGAAGCGGTAGGCATTG 100968 Query 109826 GAGC 109829 | || Sbjct 100969 GGGC 100972 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588946639546400