Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_015280.1
Length=181044
Score E
Sequences producing significant alignments: (Bits) Value
seq23 120 4e-22
>seq23
Length=1745546
Score = 120 bits (132), Expect = 4e-22
Identities = 179/254 (70%), Gaps = 0/254 (0%)
Strand=Plus/Minus
Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922
|| |||||| ||||||| ||||| || || ||| | || || ||||| | |||
Sbjct 1565991 CTTTCATGTCTTATGATAACATATCCCTCAACAAACGGCGTTTTTGAGGAGACCATAGCG 1565932
Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982
| || ||| || || |||| | || || || || || ||| | ||||| |||||| |
Sbjct 1565931 GACATTTGTGAGGTCATTCACAAAAACGGGGGGCAAGTCTATTTGGATGGGGCAAATATG 1565872
Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042
|| ||||| |||||| || | ||| | || ||||| ||||||| || | |||
Sbjct 1565871 AACGCACAAGTAGGATTATGCAGACCTGGCGATTATGGAAGCGATGTATCACACTTGAAC 1565812
Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102
| || || || || || ||||||||||| ||||| ||||| || | |||||||||||
Sbjct 1565811 CTGCACAAGACCTTTTGCATTCCACATGGTGGTGGTGGTCCAGGAATGGGTCCTATAGGG 1565752
Query 155103 GTAGCAAAACATCT 155116
|| |||||||||
Sbjct 1565751 GTCAAAAAACATCT 1565738
Score = 109 bits (120), Expect = 6e-19
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 153903 TTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGC 153962
||||| |||| || || ||||| |||||||| ||||||||||| || ||||||||||||
Sbjct 1566984 TTAGCTTTACAAACAAGGGAGCAACATATCAGAAGAGACAAAGCCACAAGTAACATCTGC 1566925
Query 153963 ACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGAT 154022
|| ||||||||||| || || |||||| | | | | |||| ||||||||| || |
Sbjct 1566924 ACTGCTCAGGCACTTCTAGCAAATATGGCGGCCATGTTCGCAGTTTATCATGGTCCACAG 1566865
Query 154023 GGACT 154027
|||||
Sbjct 1566864 GGACT 1566860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 579183926241920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |