Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_015280.1 Length=181044 Score E Sequences producing significant alignments: (Bits) Value seq23 120 4e-22 >seq23 Length=1745546 Score = 120 bits (132), Expect = 4e-22 Identities = 179/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Minus Query 154863 CTGTCATGTATTATGATTACATACCCATCTACACATGGTGTATTTGAAACTAACATTAGA 154922 || |||||| ||||||| ||||| || || ||| | || || ||||| | ||| Sbjct 1565991 CTTTCATGTCTTATGATAACATATCCCTCAACAAACGGCGTTTTTGAGGAGACCATAGCG 1565932 Query 154923 CAGATATGTAAGATCGTTCATGACAATGGTGGTCAGGTATATCTTGATGGAGCAAATCTA 154982 | || ||| || || |||| | || || || || || ||| | ||||| |||||| | Sbjct 1565931 GACATTTGTGAGGTCATTCACAAAAACGGGGGGCAAGTCTATTTGGATGGGGCAAATATG 1565872 Query 154983 AATGCACAGGTAGGACTAGCAAAACCATGTGAGTATGGTGCAGATGTATGTCATCTAAAC 155042 || ||||| |||||| || | ||| | || ||||| ||||||| || | ||| Sbjct 1565871 AACGCACAAGTAGGATTATGCAGACCTGGCGATTATGGAAGCGATGTATCACACTTGAAC 1565812 Query 155043 TTACATAAAACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATAGGT 155102 | || || || || || ||||||||||| ||||| ||||| || | ||||||||||| Sbjct 1565811 CTGCACAAGACCTTTTGCATTCCACATGGTGGTGGTGGTCCAGGAATGGGTCCTATAGGG 1565752 Query 155103 GTAGCAAAACATCT 155116 || ||||||||| Sbjct 1565751 GTCAAAAAACATCT 1565738 Score = 109 bits (120), Expect = 6e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 153903 TTAGCACTACAGACTAGAGAGCAGCATATCAGGAGAGACAAAGCAACCAGTAACATCTGC 153962 ||||| |||| || || ||||| |||||||| ||||||||||| || |||||||||||| Sbjct 1566984 TTAGCTTTACAAACAAGGGAGCAACATATCAGAAGAGACAAAGCCACAAGTAACATCTGC 1566925 Query 153963 ACAGCTCAGGCACTGCTGGCTAATATGTCTGGATTCTATGCAGCATATCATGGTGCAGAT 154022 || ||||||||||| || || |||||| | | | | |||| ||||||||| || | Sbjct 1566924 ACTGCTCAGGCACTTCTAGCAAATATGGCGGCCATGTTCGCAGTTTATCATGGTCCACAG 1566865 Query 154023 GGACT 154027 ||||| Sbjct 1566864 GGACT 1566860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 579183926241920