Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_015284.1
Length=183806
Score E
Sequences producing significant alignments: (Bits) Value
seq23 118 1e-21
>seq23
Length=1745546
Score = 118 bits (130), Expect = 1e-21
Identities = 181/256 (71%), Gaps = 4/256 (2%)
Strand=Plus/Minus
Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACAT--CA 159595
|| |||||| ||||||| |||||||| || ||| | || || ||||| | ||| |
Sbjct 1565991 CTTTCATGTCTTATGATAACATATCCCTCAACAAACGGCGTTTTTGAGGAGACCATAGCG 1565932
Query 159596 GACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATC 159655
|||| | ||| || | |||| | || || || || || ||| | ||||| ||||||
Sbjct 1565931 GACA--TTTGTGAGGTCATTCACAAAAACGGGGGGCAAGTCTATTTGGATGGGGCAAATA 1565874
Query 159656 TAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAA 159715
| || ||||| ||||| || | ||| | || ||||| ||||||| || | |
Sbjct 1565873 TGAACGCACAAGTAGGATTATGCAGACCTGGCGATTATGGAAGCGATGTATCACACTTGA 1565814
Query 159716 ACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775
|| | || ||||| || || ||||||||||| ||||| ||||| || | |||||||| |
Sbjct 1565813 ACCTGCACAAGACCTTTTGCATTCCACATGGTGGTGGTGGTCCAGGAATGGGTCCTATAG 1565754
Query 159776 GTGTAGCAAAACATCT 159791
| || |||||||||
Sbjct 1565753 GGGTCAAAAAACATCT 1565738
Score = 104 bits (114), Expect = 3e-17
Identities = 98/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Minus
Query 158578 TTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGC 158637
||||| |||| || || ||||| |||||||||||||||||||| || ||||||||||||
Sbjct 1566984 TTAGCTTTACAAACAAGGGAGCAACATATCAGAAGAGACAAAGCCACAAGTAACATCTGC 1566925
Query 158638 ACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGAT 158697
|| || || ||||| || || |||||| | | | | |||| ||||||||| || |
Sbjct 1566924 ACTGCTCAGGCACTTCTAGCAAATATGGCGGCCATGTTCGCAGTTTATCATGGTCCACAG 1566865
Query 158698 GGACT 158702
|||||
Sbjct 1566864 GGACT 1566860
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 588021885647680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |