Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_015284.1 Length=183806 Score E Sequences producing significant alignments: (Bits) Value seq23 118 1e-21 >seq23 Length=1745546 Score = 118 bits (130), Expect = 1e-21 Identities = 181/256 (71%), Gaps = 4/256 (2%) Strand=Plus/Minus Query 159538 CTGTCATGTATTATGATTACATATCCATCTACACATGGTGTATTTGAAACAAACAT--CA 159595 || |||||| ||||||| |||||||| || ||| | || || ||||| | ||| | Sbjct 1565991 CTTTCATGTCTTATGATAACATATCCCTCAACAAACGGCGTTTTTGAGGAGACCATAGCG 1565932 Query 159596 GACAGATATGTAAGATTGTTCATGAGAATGGTGGTCAGGTATATCTTGATGGTGCAAATC 159655 |||| | ||| || | |||| | || || || || || ||| | ||||| |||||| Sbjct 1565931 GACA--TTTGTGAGGTCATTCACAAAAACGGGGGGCAAGTCTATTTGGATGGGGCAAATA 1565874 Query 159656 TAAATGCACAGGTAGGTCTAGCAAAACCATGTGACTATGGTGCAGATGTATGTCATCTAA 159715 | || ||||| ||||| || | ||| | || ||||| ||||||| || | | Sbjct 1565873 TGAACGCACAAGTAGGATTATGCAGACCTGGCGATTATGGAAGCGATGTATCACACTTGA 1565814 Query 159716 ACTTACATAAGACATTCTGTATTCCACATGGAGGTGGAGGTCCTGGCGTAGGTCCTATTG 159775 || | || ||||| || || ||||||||||| ||||| ||||| || | |||||||| | Sbjct 1565813 ACCTGCACAAGACCTTTTGCATTCCACATGGTGGTGGTGGTCCAGGAATGGGTCCTATAG 1565754 Query 159776 GTGTAGCAAAACATCT 159791 | || ||||||||| Sbjct 1565753 GGGTCAAAAAACATCT 1565738 Score = 104 bits (114), Expect = 3e-17 Identities = 98/125 (78%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 158578 TTAGCACTACAGACTAGAGAGCAGCATATCAGAAGAGACAAAGCAACCAGTAACATCTGC 158637 ||||| |||| || || ||||| |||||||||||||||||||| || |||||||||||| Sbjct 1566984 TTAGCTTTACAAACAAGGGAGCAACATATCAGAAGAGACAAAGCCACAAGTAACATCTGC 1566925 Query 158638 ACAGCACAAGCACTGCTGGCTAATATGTCTGGGTTCTATGCAGCATATCATGGTGCAGAT 158697 || || || ||||| || || |||||| | | | | |||| ||||||||| || | Sbjct 1566924 ACTGCTCAGGCACTTCTAGCAAATATGGCGGCCATGTTCGCAGTTTATCATGGTCCACAG 1566865 Query 158698 GGACT 158702 ||||| Sbjct 1566864 GGACT 1566860 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588021885647680