Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_015326.1
Length=346754
Score E
Sequences producing significant alignments: (Bits) Value
seq218 168 1e-36
seq25 125 2e-23
seq428 113 1e-19
>seq218
Length=661058
Score = 168 bits (186), Expect = 1e-36
Identities = 171/223 (77%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
|||||| | |||||| | || ||||| || ||||||||||||||||| || | ||| ||
Sbjct 356231 TCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGT 356290
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
| |||||||| | |||||| || || || || || |||||||||||||||||||| ||
Sbjct 356291 GCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACC 356350
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||| |||||||||||||| || ||||| ||||| || || || || ||||| ||
Sbjct 356351 TTCCTTGTCTTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAG 356410
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
|| | |||||||| || | ||| ||||| || | ||||||
Sbjct 356411 AGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCATT 356453
Score = 147 bits (162), Expect = 5e-30
Identities = 166/223 (74%), Gaps = 6/223 (3%)
Strand=Plus/Plus
Query 194918 ATCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAG 194977
|||||||| |||| || |||||||| |||||||||||||| ||||||| || |
Sbjct 356464 ATCTGAGTACCAAA------TGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGG 356517
Query 194978 TTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGC 195037
| | |||||||| || || || ||||| ||||| | | || || ||||| |||||||
Sbjct 356518 TACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGC 356577
Query 195038 CTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAA 195097
|||||||||||||||||||| || || |||||||| || || || ||| ||||| |
Sbjct 356578 CTTCTTTGTCTTGAATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACTTCTA 356637
Query 195098 GGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
|| | ||| || || || | || || ||||| | ||||||
Sbjct 356638 AAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 145 bits (160), Expect = 2e-29
Identities = 166/223 (74%), Gaps = 0/223 (0%)
Strand=Plus/Plus
Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978
||| || | |||||| | ||||| ||||| ||||| || || |||||||| | | ||
Sbjct 356687 TCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAATGT 356746
Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038
|| |||||||| |||||||| || || || || | || |||||||||||| ||||| ||
Sbjct 356747 CCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGGAATACC 356806
Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098
||||| ||||||||||| ||| |||||||| || ||||| || ||| || |||||
Sbjct 356807 CTCTTTATCTTGAATTTTAGCCTTTACGTTCTCTATTGTGTCAGACGGTTCTACCTCAAG 356866
Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATT 195141
||| | || || || || | || || || || | ||||||
Sbjct 356867 GGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCATT 356909
Score = 141 bits (156), Expect = 2e-28
Identities = 162/218 (74%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 194923 AGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTC 194982
|| ||||| || | || | || || || || |||||||| ||||| | ||| ||||
Sbjct 356007 AGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAAAGGGTTCGT 356066
Query 194983 CCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCT 195042
|||||||| | ||| || || || || ||||| |||||||| ||||| || || |||||
Sbjct 356067 CCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCC 356126
Query 195043 TTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTA 195102
|||||||||||||| |||||||| || || || || || || |||||||||||
Sbjct 356127 TTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACTTCAAGGGTT 356186
Query 195103 ACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140
| || || || || || ||||| ||||| | ||||||
Sbjct 356187 ATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 140 bits (154), Expect = 7e-28
Identities = 146/192 (76%), Gaps = 0/192 (0%)
Strand=Plus/Plus
Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008
|||||| ||||| |||||||| | | |||||| |||||||| | || ||||| || ||
Sbjct 352189 CTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAA 352248
Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068
|| | ||||| |||||||||||||| ||||||||||| || || || ||| |||||
Sbjct 352249 AATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTT 352308
Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTAC 195128
||||| ||||| || ||| ||||| || || | || ||||| || || ||||| ||
Sbjct 352309 TTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAAC 352368
Query 195129 GAACACTTGCAT 195140
|| | ||||||
Sbjct 352369 AAAAATTTGCAT 352380
Score = 118 bits (130), Expect = 2e-21
Identities = 118/153 (77%), Gaps = 0/153 (0%)
Strand=Plus/Plus
Query 194949 CTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAA 195008
|||||| ||||| |||||||| | | ||||| |||||||| | |||||||| || ||
Sbjct 357270 CTCTTTCTGAATGTTGTAATCAGACAATGTTCTACCATCTTCCAATTGCTTACCAGCAAA 357329
Query 195009 GATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTT 195068
|| | |||||||||||||||||||| ||||||||||| || || || ||| || ||
Sbjct 357330 AATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATT 357389
Query 195069 CTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101
||||| ||||| || ||| ||||| || ||
Sbjct 357390 TTCAATTGTGTCTGACGGTTCTACTTCCAGTGT 357422
Score = 100 bits (110), Expect = 6e-16
Identities = 97/125 (78%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|||||||||||||||||||| ||||||||||| || || || ||| ||||| |||||
Sbjct 357109 CGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTAACGTTTTCAATT 357168
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || ||| ||||| || || | || ||||| || || ||||| || || | |
Sbjct 357169 GTGTCTGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATT 357228
Query 195136 TGCAT 195140
|||||
Sbjct 357229 TGCAT 357233
Score = 84.2 bits (92), Expect = 5e-11
Identities = 94/126 (75%), Gaps = 0/126 (0%)
Strand=Plus/Plus
Query 195016 CGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATG 195075
|||||||||||||||||||| ||||||||||| || || || ||| || || |||||
Sbjct 352028 CGTTGTTGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTTTCAATT 352087
Query 195076 GTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACT 195135
||||| || ||| ||||| || || | || ||||| || | || || || || |
Sbjct 352088 GTGTCTGACGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAGTGTCTTAACAAAAATC 352147
Query 195136 TGCATT 195141
||||||
Sbjct 352148 TGCATT 352153
>seq25
Length=1883024
Score = 125 bits (138), Expect = 2e-23
Identities = 146/197 (74%), Gaps = 0/197 (0%)
Strand=Plus/Plus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || ||||| ||||| || || || | |||||| | |||||||| | ||||||||
Sbjct 1512055 GTCGATTCTTTCTGAATGTTATAGTCAGAAAGAGTACGGCCATCTTCTAATTGCTTACCA 1512114
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
||||| || | | ||||| || |||||||| ||||| ||||||||||| || |||
Sbjct 1512115 GCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATCTTCGCCTTT 1512174
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || || || ||||| || ||| || |||||||| | || ||||| || | ||||
Sbjct 1512175 ACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTTTTTCCGGTAAGAGTT 1512234
Query 195124 TTTACGAACACTTGCAT 195140
|| || || | ||||||
Sbjct 1512235 TTCACAAAAATTTGCAT 1512251
>seq428
Length=160056
Score = 113 bits (124), Expect = 1e-19
Identities = 143/197 (73%), Gaps = 0/197 (0%)
Strand=Plus/Minus
Query 194944 GTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCT 195003
|| || || ||||| || |||||||| | | ||| | |||||||| | || || ||
Sbjct 129640 GTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCATCTTCCAATTGTTTTCCA 129581
Query 195004 GCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTTTGCTTG 195063
|| || || || ||||||||||| || ||||| |||||||| ||||| |||||| |||
Sbjct 129580 GCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTATCTTGGATTTTTGCCTTC 129521
Query 195064 ACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTT 195123
|| || || || || || || ||| || || | || | ||||| || || |||||
Sbjct 129520 ACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGGTCTTACCCGTTAAAGTC 129461
Query 195124 TTTACGAACACTTGCAT 195140
|| ||||| | ||||||
Sbjct 129460 TTCACGAATATTTGCAT 129444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1109424909650796
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |