Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_015398.1
Length=101487
Score E
Sequences producing significant alignments: (Bits) Value
seq218 118 7e-22
seq25 95.1 8e-15
>seq218
Length=661058
Score = 118 bits (130), Expect = 7e-22
Identities = 154/213 (72%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 34769 CAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATC 34828
|||||| || || | || |||||| ||||| || ||||| |||||| | || ||||
Sbjct 356240 CAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATC 356299
Query 34829 ATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTC 34888
|| | ||| || || ||||| ||||| ||||| |||||| | || | || ||||||||
Sbjct 356300 TTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTC 356359
Query 34889 GCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948
||| || ||| ||| | | || | ||| | |||||| || | || |||||
Sbjct 356360 TTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGT 356419
Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
||||| || |||||||| ||||||||||||||
Sbjct 356420 CTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452
>seq25
Length=1883024
Score = 95.1 bits (104), Expect = 8e-15
Identities = 157/227 (69%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 34755 CCTCCCCTCAACCTCAAAACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAA 34814
||||| || || | || |||||||| | || ||||||||||||||||||||| |||
Sbjct 1512025 CCTCCTCTTAAACGTAACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGAA 1512084
Query 34815 AGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGC 34874
|| | || |||| || | || || || || || |||| | || || || | ||
Sbjct 1512085 AGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGA 1512144
Query 34875 ACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACA 34934
| || |||||||| ||||||| || || | | || | || || |||||
Sbjct 1512145 ATACCTTCCTTGTCTTGAATCTTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACC 1512204
Query 34935 TCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981
|| | ||| || |||||||| || ||||| |||||||| || |||||
Sbjct 1512205 TCAAGGGTGATTGTTTTTCCGGTAAGAGTTTTCACAAAAATTTGCAT 1512251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 324617821589664
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |