Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_015780.1
Length=205791
Score E
Sequences producing significant alignments: (Bits) Value
seq296 93.3 6e-14
>seq296
Length=775295
Score = 93.3 bits (102), Expect = 6e-14
Identities = 217/316 (69%), Gaps = 15/316 (5%)
Strand=Plus/Plus
Query 104984 CGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAA 105043
||| |||| || || || || || || ||||| ||||| ||| | ||| ||||||| |
Sbjct 25569 CGAGAAGAGGGAGACTTGGGTCCGATATATGGGTTTCAGTGGCGTCATTTTGGAGCTGAG 25628
Query 105044 TATATCGAC-TGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTAT 105102
|||| | | || || || | || | |||| || || ||||| |||||||| ||
Sbjct 25629 TATAGAGGCATGCGAG-CCAATTACGCGAATGAAGGAATCGATCAATTGAGTCAAGTGAT 25687
Query 105103 AGAAACTATAAAAAATAACCCCGGGTG-TCGAAGAATAATTATAGATAGTTGGAATG-TG 105160
| || || |||||| | || | || | |||| ||||| || | |||||| ||
Sbjct 25688 TAATACAATCAAAAATTATCC-GAATGATAGAAGGATAATCTTATGTTCGTGGAATCCTG 25746
Query 105161 TC-ACAATTATCAGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATTTTACATTAG 105219
| ||| || || | |||||||||||||| ||||||||| | |||||||||| | | |
Sbjct 25747 TGGACA--TACCACAAATGGCTCTTCCACCCTGTCATTGTCTCGTACAATTTTTCGTAAA 25804
Query 105220 AAATAA--AATTTATTTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGT 105277
||| | |||| || | ||| || || |||||||| || ||| | ||| | ||
Sbjct 25805 TAATGACGAATTGTCTTCG-TTG----TTATACCAAAGATCGGCCGATATGGGACTGGGG 25859
Query 105278 GTACCATATAATATTG 105293
||||| | || ||||
Sbjct 25860 GTACCGTTCAACATTG 25875
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 658370378600480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |