Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_015780.1 Length=205791 Score E Sequences producing significant alignments: (Bits) Value seq296 93.3 6e-14 >seq296 Length=775295 Score = 93.3 bits (102), Expect = 6e-14 Identities = 217/316 (69%), Gaps = 15/316 (5%) Strand=Plus/Plus Query 104984 CGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCTGGAGCTCAA 105043 ||| |||| || || || || || || ||||| ||||| ||| | ||| ||||||| | Sbjct 25569 CGAGAAGAGGGAGACTTGGGTCCGATATATGGGTTTCAGTGGCGTCATTTTGGAGCTGAG 25628 Query 105044 TATATCGAC-TGTGATACCGACTATACCGGCCAAGGTATAGACCAATTAAGTCAAGTTAT 105102 |||| | | || || || | || | |||| || || ||||| |||||||| || Sbjct 25629 TATAGAGGCATGCGAG-CCAATTACGCGAATGAAGGAATCGATCAATTGAGTCAAGTGAT 25687 Query 105103 AGAAACTATAAAAAATAACCCCGGGTG-TCGAAGAATAATTATAGATAGTTGGAATG-TG 105160 | || || |||||| | || | || | |||| ||||| || | |||||| || Sbjct 25688 TAATACAATCAAAAATTATCC-GAATGATAGAAGGATAATCTTATGTTCGTGGAATCCTG 25746 Query 105161 TC-ACAATTATCAGATATGGCTCTTCCACCGTGTCATTGTTTGGTACAATTTTACATTAG 105219 | ||| || || | |||||||||||||| ||||||||| | |||||||||| | | | Sbjct 25747 TGGACA--TACCACAAATGGCTCTTCCACCCTGTCATTGTCTCGTACAATTTTTCGTAAA 25804 Query 105220 AAATAA--AATTTATTTAGATTGTCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGT 105277 ||| | |||| || | ||| || || |||||||| || ||| | ||| | || Sbjct 25805 TAATGACGAATTGTCTTCG-TTG----TTATACCAAAGATCGGCCGATATGGGACTGGGG 25859 Query 105278 GTACCATATAATATTG 105293 ||||| | || |||| Sbjct 25860 GTACCGTTCAACATTG 25875 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 658370378600480