Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq12 342 6e-89 >seq12 Length=2314596 Score = 342 bits (378), Expect = 6e-89 Identities = 547/780 (70%), Gaps = 8/780 (1%) Strand=Plus/Minus Query 36876 ACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGT 36935 ||||| || ||||||||||| || ||| |||| || ||||||||||| || || ||| Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATC-AGT 282038 Query 36936 G-ATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAA 36994 | | || || | |||||| ||||| ||||| |||||| || || ||| || Sbjct 282037 GGAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAA 281978 Query 36995 TTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTAT 37054 || | ||| | || || |||||||| || || | | |||| |||| | || || Sbjct 281977 CTCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCAT 281918 Query 37055 ACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATC 37114 ||||||||| |||| || | ||||| | |||| | ||| ||| | || ||||| Sbjct 281917 ACCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATC 281858 Query 37115 TTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTA-AATATTT--AAACAA 37171 || ||||| | | ||| || ||| || | || | ||||| ||||| Sbjct 281857 GCGAATTATAT---CTGTTACTCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACAT 281801 Query 37172 TAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGT 37231 |||||| |||||||||||||| ||||||||||| | | || | ||||||||||| || Sbjct 281800 TAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGT 281741 Query 37232 TAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAA 37291 | ||||||||| | ||| | ||| || | |||||| || || |||||| ||| ||||| Sbjct 281740 CAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAA 281681 Query 37292 GAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATC 37351 |||||| ||||| || ||||||||||| |||| ||| ||| |||| | | | | Sbjct 281680 GAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACT 281621 Query 37352 AGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGC 37411 ||||| | | |||||| ||||| |||||||| || |||||||| || Sbjct 281620 GCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGC 281561 Query 37412 TTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATA 37471 || || ||||| | ||| ||||| || ||||||||| ||||| || |||||| Sbjct 281560 ATTGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATA 281501 Query 37472 CATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGA 37531 |||||| || || ||||||||||| || || || ||||||||||| || | ||| |||| Sbjct 281500 CATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGT 281441 Query 37532 TAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGC 37591 || ||| || || | | || |||| | | ||||||||| || || |||||| || Sbjct 281440 TACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGC 281381 Query 37592 TGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCA 37651 ||||| || ||||| |||| | || ||||| |||||||||||||| || || | ||| Sbjct 281380 AGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCA 281321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592287273007520