Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq12 342 6e-89
>seq12
Length=2314596
Score = 342 bits (378), Expect = 6e-89
Identities = 547/780 (70%), Gaps = 8/780 (1%)
Strand=Plus/Minus
Query 36876 ACTCCCATTTTTTGATATTCTCCAACTCGTCTTTCGAAAAAATTTGTCTTTCCTTCTAGT 36935
||||| || ||||||||||| || ||| |||| || ||||||||||| || || |||
Sbjct 282096 ACTCCAATCTTTTGATATTCACCTACTTTCTTTTCAAAGAAATTTGTCTTGCCATC-AGT 282038
Query 36936 G-ATATATTTTCCATAAAATCAAATGGATTAGATGTATTATATATAGTACTACATGATAA 36994
| | || || | |||||| ||||| ||||| |||||| || || ||| ||
Sbjct 282037 GGAAATTTTGTTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAA 281978
Query 36995 TTCCTTCAGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTAT 37054
|| | ||| | || || |||||||| || || | | |||| |||| | || ||
Sbjct 281977 CTCTACTAAAAGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCAT 281918
Query 37055 ACCAATTAGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATC 37114
||||||||| |||| || | ||||| | |||| | ||| ||| | || |||||
Sbjct 281917 ACCAATTAGGCTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATC 281858
Query 37115 TTTAACTATATTAACAATAACTTCTTCAGTTGGGGGATATTTTA-AATATTT--AAACAA 37171
|| ||||| | | ||| || ||| || | || | ||||| |||||
Sbjct 281857 GCGAATTATAT---CTGTTACTCGCTCTTTTGATGGTTTTTGAACAATATAAGAAAACAT 281801
Query 37172 TAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGT 37231
|||||| |||||||||||||| ||||||||||| | | || | ||||||||||| ||
Sbjct 281800 TAAACAAGCAAAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGT 281741
Query 37232 TAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAA 37291
| ||||||||| | ||| | ||| || | |||||| || || |||||| ||| |||||
Sbjct 281740 CAGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAA 281681
Query 37292 GAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATC 37351
|||||| ||||| || ||||||||||| |||| ||| ||| |||| | | | |
Sbjct 281680 GAAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTACT 281621
Query 37352 AGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGC 37411
||||| | | |||||| ||||| |||||||| || |||||||| ||
Sbjct 281620 GCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGC 281561
Query 37412 TTTTAAGAGAAAGtttttttCTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATA 37471
|| || ||||| | ||| ||||| || ||||||||| ||||| || ||||||
Sbjct 281560 ATTGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATA 281501
Query 37472 CATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGA 37531
|||||| || || ||||||||||| || || || ||||||||||| || | ||| ||||
Sbjct 281500 CATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAGT 281441
Query 37532 TAATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGC 37591
|| ||| || || | | || |||| | | ||||||||| || || |||||| ||
Sbjct 281440 TACTTGTACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGC 281381
Query 37592 TGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCA 37651
||||| || ||||| |||| | || ||||| |||||||||||||| || || | |||
Sbjct 281380 AGCAAAAAAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCA 281321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592287273007520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |