Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_017940.1
Length=127732
Score E
Sequences producing significant alignments: (Bits) Value
seq296 138 9e-28
>seq296
Length=775295
Score = 138 bits (152), Expect = 9e-28
Identities = 402/609 (66%), Gaps = 20/609 (3%)
Strand=Plus/Minus
Query 29764 GTGGGAAAGGGTCTGGGCTCCCTCTCGA-GCTGAGTCTT-CAGCGGTTCCACGTGATCCA 29821
|||||||| | | || |||| |||| |||| ||||| || | ||| | |||||
Sbjct 26026 GTGGGAAATGTCTTTGGAACCCT-TCGAAGCTG-GTCTTTCAAAGCTTCTATGTGATTTT 25969
Query 29822 GGTAGACGTGAGCGTCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGT 29881
| | | |||| ||| || | ||||| | ||| || | |||| || ||||| || |
Sbjct 25968 GAAATATGTGACTGTCGCCAATCGTGTGTATAAATTCGCTGGGTTTTAAACCGGTCACAT 25909
Query 29882 GAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGTACCCCGAGCCCCA 29941
|||| |||||| ||| ||||||| ||| || || ||||| || |||||||| || ||||
Sbjct 25908 GAGCTATCATGACCGTTAGGAGAGCGTAACTCGCAATGTTGAACGGTACCCCCAGTCCCA 25849
Query 29942 TGTCCCCCGACCTCTGGTAGAGCTGACACGAGAGCTCTCCGTCGCTCACGTAAAACTG-- 29999
| || |||| || ||||| | | | || | || | | | ||| |||| ||
Sbjct 25848 TATCGGCCGATCTTTGGTATAACAACGAAGACAATTCGTCATTATTTACGAAAAATTGTA 25789
Query 30000 --ACACATGGTGTGGCACGGAGGAAGAGCCATGAGGCCCAAGTCTTTGGGGTTCCAGGCG 30057
| ||| || || || ||||||||||| | | ||| || ||||| |
Sbjct 25788 CGAGACAA----TGACAGGGTGGAAGAGCCATTTGTGGTATGTCCACAGGATTCCACGAA 25733
Query 30058 CACACGATGATGCGCCTGTCTTCTGGGTTGTTCCTGATGAGGTCCACGGCGTTTTGCAGC 30117
|| | ||| || | || || | || | || |||| | | | | ||
Sbjct 25732 CATAAGATTATCCTTCTATCATTCGGATAATTTTTGATTGTATTAATCACTTGACTCAAT 25673
Query 30118 TGATCCACCCC--CATCCCCGAGTAGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAAT 30175
||||| | || ||| | || || | || | |||| | | ||||| ||||| ||||
Sbjct 25672 TGATCGATTCCTTCATTCGCG--TAATTGGCTCGCATGCCTCTATACTCAGCTCCAAAAT 25615
Query 30176 GCCTCCACTGGAACCCGTACACCGGTCCCAGGTCTCCCTCTTCCCTGTGCTCGAAGCCCC 30235
| | |||||| ||||| || | ||| |||| |||||||||||| | || | | || |||
Sbjct 25614 GACGCCACTGAAACCCATATATCGGACCCAAGTCTCCCTCTTCTCGGTCCCCAAACCCCA 25555
Query 30236 TCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAGATCTTTACCCCCTTCTCG--GA 30293
| | |||||| | || || |||| |||| | ||||| || |||| | |||| | ||
Sbjct 25554 TTCTATCCAAATACTCCCTCGAACTGTTGACATCCCATATTTTTA--CGTTTCTGGTAGA 25497
Query 30294 GAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGCAGCTCCTCCACGACGGCCTT 30353
|| ||||||| |||||| ||| | | |||||||||| |||||| || ||| |
Sbjct 25496 AAGTTCTTTGGCATTTGTGCTTCCTTTTATTAACCACAGCATCTCCTCGACTACGCCACG 25437
Query 30354 CCAAAAGAC 30362
|||||||||
Sbjct 25436 CCAAAAGAC 25428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 408597739652324
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |