Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_020842.1
Length=79114
Score E
Sequences producing significant alignments: (Bits) Value
seq310 174 8e-39
>seq310
Length=366558
Score = 174 bits (192), Expect = 8e-39
Identities = 186/246 (76%), Gaps = 0/246 (0%)
Strand=Plus/Plus
Query 25914 CATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTC 25973
||||||| |||||| | | |||||| |||||||| ||||| | |||||||| |||||||
Sbjct 101737 CATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACAAATCTC 101796
Query 25974 TCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTG 26033
| |||||||| ||||||||||| ||| ||||| | || ||| || ||||| || ||||
Sbjct 101797 TTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATATGTCTG 101856
Query 26034 AGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTA 26093
||||||||||| | ||||||||||||| ||| ||| || || ||||||||||
Sbjct 101857 CATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTTGATCTA 101916
Query 26094 CGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGT 26153
| ||||| || | ||| ||||| | ||| |||||||| || | ||| ||||
Sbjct 101917 CATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAGTGCCGT 101976
Query 26154 TTGTGC 26159
| ||||
Sbjct 101977 TGGTGC 101982
Score = 102 bits (112), Expect = 4e-17
Identities = 314/477 (66%), Gaps = 14/477 (3%)
Strand=Plus/Plus
Query 24686 GCTGGTTTAGTTCTAAGATAATACATTCCAGTTTTCAATTTCTTCTTCCAACCGTAAAAA 24745
|| ||||| ||||| | ||||||||| ||||||||||| ||||||||| || ||||||
Sbjct 100539 GCAGGTTTTGTTCTTAAATAATACATACCAGTTTTCAAGCCCTTCTTCCATCCATAAAAA 100598
Query 24746 TGCATTGATGTTAGTTTTGCAATGTTTGCTGATTCTAAAAACAAGTTCATCGATTGAGCT 24805
|| || || | | | | | ||||| ||| | | | || | || || |||
Sbjct 100599 TGAATGGACGACATTACTTGATAGTTTGGCTTTTCAATATGAATATTTAAAGACTG-GCT 100657
Query 24806 -TGGCAAACAAAACGTTGTCTATCTGCAGCTAAGTCAATGATCGTTTTCATCGATATATC 24864
||| || ||| | | |||||| || | || | || |||| || || ||
Sbjct 100658 CTGGTCAATAAAGGCTCCACGATCTGCCGCCATGTTTAAAATTACTTTCTGTGAAATTTC 100717
Query 24865 GTAAGCTGTTTTGTATCTCTCTTTTATCTCAGTTGGAATACTTGCAATATTTTGAACTGA 24924
| | ||||| ||| ||| ||| || ||| ||||| | || ||||||||||| |||
Sbjct 100718 CCACACAGTTTTATATATCTTTTTCATATCATCGGGAATTCCTGGAATATTTTGAATTGA 100777
Query 24925 TCCATTTTCTCTCAATA----GATTCAATCTCATATTCGGTGTCCAAAGAT--TAATTTT 24978
||| | | ||| | | || | |||| || ||| | | ||| |
Sbjct 100778 GCCACAAT-TGGCAAGAACCTGGTT---TTTCATCA-CGTCATCCCACAGTCCTAACTCA 100832
Query 24979 TTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGACAAAACTCTTCT 25038
|||| |||||||| ||| || | || | | | |||||||||||| ||||| | |||
Sbjct 100833 GTCAA-ATCTCTAAGCAAATGATGGTTGACAACGAAAAATTCTCCAGATAAAACGCGTCT 100891
Query 25039 TATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAGATTTGAGAAGT 25098
| | ||| || |||||| ||||||| | | |||||||||| || || ||||| | ||
Sbjct 100892 TGTATATAGATTCGAAGTGTATGGTTCTACAGATTCATTATTACCCAAAATTTGGGCTGT 100951
Query 25099 AGATGCTGTTGGCATTAATGCTATTAATAGCGAATTTCTCAAACCATATTTAACAAT 25155
|| || || |||||| || | | || |||||||| | ||| || ||| ||||
Sbjct 100952 TGAAGCGGTAGGCATTGGGGCAAGAAGTAATGAATTTCTAATACCGTACTTAGCAAT 101008
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 253027701307100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |