Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq23 114 1e-20 >seq23 Length=1745546 Score = 114 bits (126), Expect = 1e-20 Identities = 180/256 (70%), Gaps = 4/256 (2%) Strand=Plus/Plus Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230 ||||||||| || || |||||||| | || ||||| ||||| ||||||||||| || Sbjct 1565738 AGATGTTTTTTGACCCCTATAGGACCCATTCCTGGACCACCACCACCATGTGGAATGCAA 1565797 Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290 || ||||| || | || | || ||||||| ||||| || | ||| | || Sbjct 1565798 AAGGTCTTGTGCAGGTTCAAGTGTGATACATCGCTTCCATAATCGCCAGGTCTGCATAAT 1565857 Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350 ||||| ||||| || | |||||| ||||| | ||| || || || || || | |||| | Sbjct 1565858 CCTACTTGTGCGTTCATATTTGCCCCATCCAAATAGACTTGCCCCCCGTTTTTGTGAATG 1565917 Query 138351 ATCTTACATATCTGTCTG--ATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAA 138408 | || ||| | |||| | ||| | ||||| || || | || || |||||||| | Sbjct 1565918 ACCTCACAAA--TGTCCGCTATGGTCTCCTCAAAAACGCCGTTTGTTGAGGGATATGTTA 1565975 Query 138409 TCATAATACATGAGAG 138424 |||||| |||||| || Sbjct 1565976 TCATAAGACATGAAAG 1565991 Score = 109 bits (120), Expect = 6e-19 Identities = 99/125 (79%), Gaps = 0/125 (0%) Strand=Plus/Plus Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319 ||||| | || ||||||||| |||| | | | | ||||||||| || ||||| || Sbjct 1566860 AGTCCCTGTGGACCATGATAAACTGCGAACATGGCCGCCATATTTGCTAGAAGTGCCTGA 1566919 Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379 || |||||||||||||| || |||||||||||||| ||||| ||||| || ||||||| Sbjct 1566920 GCAGTGCAGATGTTACTTGTGGCTTTGTCTCTTCTGATATGTTGCTCCCTTGTTTGTAAA 1566979 Query 139380 GCTAA 139384 ||||| Sbjct 1566980 GCTAA 1566984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578969536929760