Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_020845.1
Length=180977
Score E
Sequences producing significant alignments: (Bits) Value
seq23 114 1e-20
>seq23
Length=1745546
Score = 114 bits (126), Expect = 1e-20
Identities = 180/256 (70%), Gaps = 4/256 (2%)
Strand=Plus/Plus
Query 138171 AGATGTTTTGCTACACCAATAGGACCTACGCCAGGACCTCCACCTCCATGTGGAATACAG 138230
||||||||| || || |||||||| | || ||||| ||||| ||||||||||| ||
Sbjct 1565738 AGATGTTTTTTGACCCCTATAGGACCCATTCCTGGACCACCACCACCATGTGGAATGCAA 1565797
Query 138231 AATGTCTTATGTAAATTTAGATGACATACATCTGCACCATAGTCACATGGTTTTGCTAGA 138290
|| ||||| || | || | || ||||||| ||||| || | ||| | ||
Sbjct 1565798 AAGGTCTTGTGCAGGTTCAAGTGTGATACATCGCTTCCATAATCGCCAGGTCTGCATAAT 1565857
Query 138291 CCTACCTGTGCATTTAGATTTGCACCATCGAGATATACCTGACCACCATTGTCATGAACG 138350
||||| ||||| || | |||||| ||||| | ||| || || || || || | |||| |
Sbjct 1565858 CCTACTTGTGCGTTCATATTTGCCCCATCCAAATAGACTTGCCCCCCGTTTTTGTGAATG 1565917
Query 138351 ATCTTACATATCTGTCTG--ATGTTTGTTTCAAATACACCATGAGTCGATGGATATGTAA 138408
| || ||| | |||| | ||| | ||||| || || | || || |||||||| |
Sbjct 1565918 ACCTCACAAA--TGTCCGCTATGGTCTCCTCAAAAACGCCGTTTGTTGAGGGATATGTTA 1565975
Query 138409 TCATAATACATGAGAG 138424
|||||| |||||| ||
Sbjct 1565976 TCATAAGACATGAAAG 1565991
Score = 109 bits (120), Expect = 6e-19
Identities = 99/125 (79%), Gaps = 0/125 (0%)
Strand=Plus/Plus
Query 139260 AGTCCATCTGCACCATGATATGCTGCATAGAATCCAGACATATTTGCGAGCAGTGCTTGT 139319
||||| | || ||||||||| |||| | | | | ||||||||| || ||||| ||
Sbjct 1566860 AGTCCCTGTGGACCATGATAAACTGCGAACATGGCCGCCATATTTGCTAGAAGTGCCTGA 1566919
Query 139320 GCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTCTAATATGCTGCTCTCTAGTTTGTAGT 139379
|| |||||||||||||| || |||||||||||||| ||||| ||||| || |||||||
Sbjct 1566920 GCAGTGCAGATGTTACTTGTGGCTTTGTCTCTTCTGATATGTTGCTCCCTTGTTTGTAAA 1566979
Query 139380 GCTAA 139384
|||||
Sbjct 1566980 GCTAA 1566984
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 578969536929760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |