Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq296 109 7e-19 >seq296 Length=775295 Score = 109 bits (120), Expect = 7e-19 Identities = 169/240 (70%), Gaps = 1/240 (0%) Strand=Plus/Plus Query 47833 AACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTT 47892 || || ||| |||| ||||||||| ||||||||||||| || | | ||| | |||| Sbjct 38079 AATCAAATA-CCTCTACATAATCTTTGGCATGTCCCCAATCCCTTTTGGAATCCAAATTT 38137 Query 47893 CCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTA 47952 || || | ||| | || | ||| | | ||| || | | || ||||| || Sbjct 38138 CCCAGTTCAAAAGATTCAGACAAACCCAAATAAATTTTGGCTATTTCCCTAGTAATTTTT 38197 Query 47953 CGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAG 48012 | ||| ||||| |||||||| | ||||||| |||||||||||| || |||||| | || Sbjct 38198 CTAGTAACAAATGTTTCACCTCTTCTTGGACTTTCATGATTAAACAGTATACCATTGCAT 38257 Query 48013 GCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072 ||| |||| | || | ||| || || || ||||| ||||||| |||| | ||| ||| Sbjct 38258 GCAAACATACTATAGGCTTCTCGGTAATTAATTACTGTCCAGTAGGCATACAATTTGGCA 38317 Score = 89.7 bits (98), Expect = 7e-13 Identities = 100/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 47939 CTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAA 47998 |||| || || || | || || || ||||| || | ||||||| ||| ||||| |||| Sbjct 226399 CTCTGGTTATTTTCCTGGTAACGAATGTTTCTCCCCTTCTTGGACTTTCGTGATTGAAAA 226458 Query 47999 GAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACC 48058 |||||||| |||||||| |||| ||||| | ||| | ||||| | || | ||| ||| Sbjct 226459 GAATACCATTACAGGCAAACATACCGTAGGCTTCTCTGTAGTTTATAACAACCCAATACG 226518 Query 48059 CATAGAGTTTTGCA 48072 |||| | ||| ||| Sbjct 226519 CATACAATTTAGCA 226532 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665461225104160