Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_020851.1
Length=208007
Score E
Sequences producing significant alignments: (Bits) Value
seq296 109 7e-19
>seq296
Length=775295
Score = 109 bits (120), Expect = 7e-19
Identities = 169/240 (70%), Gaps = 1/240 (0%)
Strand=Plus/Plus
Query 47833 AACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTT 47892
|| || ||| |||| ||||||||| ||||||||||||| || | | ||| | ||||
Sbjct 38079 AATCAAATA-CCTCTACATAATCTTTGGCATGTCCCCAATCCCTTTTGGAATCCAAATTT 38137
Query 47893 CCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAATGCTCTTGTAATCTTA 47952
|| || | ||| | || | ||| | | ||| || | | || ||||| ||
Sbjct 38138 CCCAGTTCAAAAGATTCAGACAAACCCAAATAAATTTTGGCTATTTCCCTAGTAATTTTT 38197
Query 47953 CGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAG 48012
| ||| ||||| |||||||| | ||||||| |||||||||||| || |||||| | ||
Sbjct 38198 CTAGTAACAAATGTTTCACCTCTTCTTGGACTTTCATGATTAAACAGTATACCATTGCAT 38257
Query 48013 GCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCA 48072
||| |||| | || | ||| || || || ||||| ||||||| |||| | ||| |||
Sbjct 38258 GCAAACATACTATAGGCTTCTCGGTAATTAATTACTGTCCAGTAGGCATACAATTTGGCA 38317
Score = 89.7 bits (98), Expect = 7e-13
Identities = 100/134 (75%), Gaps = 0/134 (0%)
Strand=Plus/Plus
Query 47939 CTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAAA 47998
|||| || || || | || || || ||||| || | ||||||| ||| ||||| ||||
Sbjct 226399 CTCTGGTTATTTTCCTGGTAACGAATGTTTCTCCCCTTCTTGGACTTTCGTGATTGAAAA 226458
Query 47999 GAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTACC 48058
|||||||| |||||||| |||| ||||| | ||| | ||||| | || | ||| |||
Sbjct 226459 GAATACCATTACAGGCAAACATACCGTAGGCTTCTCTGTAGTTTATAACAACCCAATACG 226518
Query 48059 CATAGAGTTTTGCA 48072
|||| | ||| |||
Sbjct 226519 CATACAATTTAGCA 226532
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 665461225104160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |