Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_021248.1
Length=307691
Score E
Sequences producing significant alignments: (Bits) Value
seq218 174 3e-38
seq12 170 4e-37
seq428 145 2e-29
seq25 141 2e-28
>seq218
Length=661058
Score = 174 bits (192), Expect = 3e-38
Identities = 177/231 (77%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| ||||||||||| || |||||||| | || | ||||| ||| || ||||||
Sbjct 356679 ATACCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCA 356738
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||| | |||| || | || || |||||||| |||||||| ||||| || |||
Sbjct 356739 GACAATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGT 356798
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || || ||||||||||| |||||| ||||| || ||| | || |||| ||||
Sbjct 356799 GGAATACCCTCTTTATCTTGAATTTTAGCCTTTACGTTCTCTATTGTGTCAGACGGTTCT 356858
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
|| || || || || ||||||||||||| ||| |||| ||| |||||||||
Sbjct 356859 ACCTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCATT 356909
Score = 158 bits (174), Expect = 2e-33
Identities = 173/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|||||||||| ||| | ||||| |||||||| |||| || || |||||||||||
Sbjct 355995 ATACCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCT 356054
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | |||||| |||| ||||| ||||| || ||||| || | | |||||||| |||
Sbjct 356055 GAAAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGT 356114
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| ||||| ||| || || ||| | ||| || | |||
Sbjct 356115 GGGATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCT 356174
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || || || |||||||||||||||||||| | || || |||||
Sbjct 356175 ACTTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 154 bits (170), Expect = 3e-32
Identities = 172/230 (75%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
|| ||||||||||||||||| || ||||| | ||| |||||| || || ||||||
Sbjct 352151 ATTCCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCA 352210
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| || |||| |||| |||||||||||||| ||||| || || | || || || ||
Sbjct 352211 GACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGA 352270
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| || || || ||| || || || || | ||||| | ||||
Sbjct 352271 GGAATACCTTCTTTGTCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCT 352330
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| || || |||||||| |||||||| ||||||| ||| || |||||
Sbjct 352331 ACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Score = 145 bits (160), Expect = 2e-29
Identities = 164/220 (75%), Gaps = 0/220 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||| || | ||||||||| || ||||| | ||| |||||| || || ||||||
Sbjct 357232 ATACCTCCACGAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCA 357291
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| ||||||| |||| |||||||| ||||||||||| || || | ||||| || ||
Sbjct 357292 GACAATGTTCTACCATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGA 357351
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || |||||||| || || || || || ||||| || | ||||||| ||||
Sbjct 357352 GGAATACCTTCTTTGTCCTGGATCTTGGCCTTCACATTTTCAATTGTGTCTGACGGTTCT 357411
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526
||||| || || || ||||||||||||| ||| |||| ||
Sbjct 357412 ACTTCCAGTGTGATTGTTTTACCAGTTAGTGTCTTAACAA 357451
Score = 140 bits (154), Expect = 6e-28
Identities = 157/210 (75%), Gaps = 0/210 (0%)
Strand=Plus/Plus
Query 192327 TACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATC 192386
||| ||||| | ||| | ||||| ||||||||||| || | || || |||| ||
Sbjct 356471 TACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACCATCTTC 356530
Query 192387 CAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTG 192446
|| |||||| || ||||||||||| ||||| ||||| ||||| || |||||||| |||||
Sbjct 356531 CAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTG 356590
Query 192447 TATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTT 192506
||||| ||| ||||| || | |||||| | ||| ||||||| ||| || |||||
Sbjct 356591 AATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACTTCTAAAGTGATCGTTTT 356650
Query 192507 ACCAGTTAATGTTTTAATAAATATCTGCAT 192536
|||||| | || || | || || |||||
Sbjct 356651 ACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 132 bits (146), Expect = 9e-26
Identities = 168/231 (73%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366
||||||||||| ||||| || |||||||| | ||| | ||||| ||||| || |||
Sbjct 356223 ATACCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCA 356282
Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426
|| | || || |||| || || || || |||||||| |||| | ||||| || ||
Sbjct 356283 GAAAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGA 356342
Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486
|| || ||||| || ||||| |||||| ||| || || || | ||| || | ||
Sbjct 356343 GGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCA 356402
Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATT 192537
||||||||||| ||||| || ||||| | || || | ||| |||||||||
Sbjct 356403 ACTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCATT 356453
>seq12
Length=2314596
Score = 170 bits (188), Expect = 4e-37
Identities = 529/818 (65%), Gaps = 9/818 (1%)
Strand=Plus/Minus
Query 49590 TTCATAAAATCAAATGGATTTTTGGTATTATAATATTTTTCTCCTATCAATACATATAAT 49649
|||||||| ||||| ||||| || ||||||| || || | ||| | |||
Sbjct 282027 TTCATAAAGTCAAACGGATTCTTAACATTATAAATCTTATCACAACCCAACTCTACTAAA 281968
Query 49650 AATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAAT 49709
| | || ||||||||||| | ||| || ||||| | || ||||||||||| | ||
Sbjct 281967 AGACGGTCAGCTACAAATTCGATATACTGAGACATCAGTTTGCAATTCATACCAATTAGG 281908
Query 49710 TTAAATGGTAATGCATCATCAATAAATTCtttttctatttctacagcttgtttaattatc 49769
| | || || |||||| | |||||| | ||| |||| || || | ||||||
Sbjct 281907 CTTACAGGCAAAGCATCAGTTAAAAATTCCTGTTCAATTTTAACTGCATCGCGAATTATA 281848
Query 49770 ataattatattattttttgataatttatatttaatatgattcgcatatattaaACATGCA 49829
||| | ||||||| ||| || || | || | | | |||||||| |||
Sbjct 281847 TCTGTTACTCGCTCTTTTGATGGTTT---TTGAACAATATAAGAAAACATTAAACAAGCA 281791
Query 49830 AAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTGGC 49889
|||||| ||| ||||| || || | ||| |||| |||||| ||| || | |||||||
Sbjct 281790 AAATCACAATGCAAACCTTCATCGCGAGAAATAAGCTCATTAGAAAATGTCAGTCCTGGC 281731
Query 49890 ATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATACCC 49949
|| | || | || || |||||||| || | |||||||| | |||||||| || ||
Sbjct 281730 ATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAGAAAATTCCT 281671
Query 49950 TCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAT-ATCCA 50008
|| ||| |||||||| | | || | || || || || | | || | |||||
Sbjct 281670 TCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGTTGCATTCTTA-CTGCTGATCCA 281612
Query 50009 ATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAATAA 50068
|| | ||||||||| || || || || | | |||| || |||| ||||| || || ||
Sbjct 281611 ATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAATAGCATTGAA-AA 281553
Query 50069 TTCAtt-tttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTTCAG 50127
||| ||| || | || | | ||||||||| |
Sbjct 281552 GAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTACTATACATTTCTG 281493
Query 50128 AATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATAC-TGA 50186
|||| | | ||| || || ||||| || |||||| | || || | ||| ||
Sbjct 281492 AATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCAACGAGCCTCAG-TTACTTGT 281434
Query 50187 ACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGAAG 50246
||||| | ||||| || || | || ||| |||||| ||||||||||| || ||
Sbjct 281433 ACTTCTTGACTGAATCTCTCTACAAGGTTTTCATTTACAATTCCATCAGATGCAGCAAAA 281374
Query 50247 AATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAAATTTTCCCAAGATTCA 50306
|| || | || | | ||| ||||| |||||| || | || || ||||| ||
Sbjct 281373 AAGGCAAGTACATGTGAAATGAAATGCCTTTCATCATTTGACAACTTATCCCAGTGGGCA 281314
Query 50307 AGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTTTTATAC 50366
|| || || || | |||||||||||| ||||||| || || ||| | | || || |||
Sbjct 281313 AGGTCCTTAGAAAGGTCTACTTCTTCTGTTGTCCAGAAGGAAGCTTCAGCTTCCTTGTAC 281254
Query 50367 ATTTGATATATATCAAAATGTTCAATGGGAAATAGTAC 50404
||| | || || || || ||| ||||||| |||
Sbjct 281253 TTTTCCCAAATGTCTGGATATTGAATAGGAAATATTAC 281216
>seq428
Length=160056
Score = 145 bits (160), Expect = 2e-29
Identities = 160/213 (75%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 192324 TAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCAGATAATGTTCGTTCATC 192383
||| || ||||| || || | || || ||| || |||||||| || || || ||||
Sbjct 129656 TAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCATC 129597
Query 192384 ATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATC 192443
||||||||||| |||||||| |||| | ||||| |||||||| ||||||||||||||
Sbjct 129596 TTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTATC 129537
Query 192444 TTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTACTTCTAGAGTAATGGT 192503
||| ||||| || ||||| || | ||| |||| ||| || |||| ||| |||||
Sbjct 129536 TTGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGGT 129477
Query 192504 TTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
||||| ||||| || || | ||||| |||||
Sbjct 129476 CTTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444
>seq25
Length=1883024
Score = 141 bits (156), Expect = 2e-28
Identities = 174/238 (73%), Gaps = 0/238 (0%)
Strand=Plus/Plus
Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358
||| ||||||||| ||||| | |||||| || || ||||| || | ||||| || |
Sbjct 1512014 GTTCAATAATACCTCCTCTTAAACGTAACACCAAGTGTAAGGTCGATTCTTTCTGAATGT 1512073
Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418
|||| ||||| | || || |||| || ||||| |||||||| || ||||| |||||||
Sbjct 1512074 TATAGTCAGAAAGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAATTAACCTCTGTT 1512133
Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478
||||||| || || ||||| || ||||| || || |||||||| || | ||||
Sbjct 1512134 GATCAGGAGGAATACCTTCCTTGTCTTGAATCTTCGCCTTTACATTTTCGATTGTGTCTG 1512193
Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536
| | ||| || || || || || ||||| || || | ||||| | ||| || |||||
Sbjct 1512194 AGGGTTCAACCTCAAGGGTGATTGTTTTTCCGGTAAGAGTTTTCACAAAAATTTGCAT 1512251
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 984429696763800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |