Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_021312.1
Length=459984
Score E
Sequences producing significant alignments: (Bits) Value
seq12 149 2e-30
seq296 89.7 2e-12
>seq12
Length=2314596
Score = 149 bits (164), Expect = 2e-30
Identities = 558/856 (65%), Gaps = 28/856 (3%)
Strand=Plus/Plus
Query 133103 GAGATTTGGCAGATGTATAAAAAACAGCAAGATTTATTTTGGACTTCAACTGAAGTAGAT 133162
|| |||||| | | ||| || || ||| || || ||||| || ||||||||
Sbjct 281240 GACATTTGGGAAAAGTACAAGGAAGCTGAAGCTTCCTTCTGGACAACAGAAGAAGTAGAC 281299
Query 133163 TTATCCAAAGACCCAGCCCACTGGGAAGCCCTTACTGGGGATGAAAAACATTTTATTTCT 133222
| || || |||| ||||||||||| | | ||||||| ||||| |||||
Sbjct 281300 CTTTCTAAGGACCTTGCCCACTGGGATAAGTTGTCAAATGATGAAAGGCATTTCATTTCA 281359
Query 133223 -ATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACACG 133281
||| || || ||||||||||| |||||| ||||| |||||| | | | |
Sbjct 281360 CATGTACTT-GCCTTTTTTGCTGCATCTGATGGAATTGTAAATGAAAACCTTGTAGAGAG 281418
Query 133282 GTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGAT 133341
|| | |||||| ||| | | || || ||| ||||||||| | || ||||| ||
Sbjct 281419 ATTCAGTCAAGAAGTACAAGTAACTGAGGCTCGTTGCTTTTATGGTTTCCAAATTGCCAT 281478
Query 133342 GGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGT 133401
|||||||||||||| | ||| |||||| ||||| ||||| || || | |
Sbjct 281479 TGAAAATATCCATTCAGAAATGTATAGTACTCTCATTGACACTTATATATTTGACCCAGA 281538
Query 133402 CCAGAAGCACAAACTATTCAACGCCATT--AGCGAATTTCCTTGTATTAAAAAGAAATCT 133459
|||| | || ||||| || ||| | | | | |||||| |||| ||||| ||
Sbjct 281539 AGAGAAAGAATTTCTTTTCAATGCTATTGAAACCA--TGCCTTGTGTTAAGAAGAAGGCT 281596
Query 133460 GACTGGGCTATTAAATGGATCCAGGA-CAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGC 133518
|| |||||| || | ||||| ||| | ||| ||| | || | || | |||||
Sbjct 281597 GATTGGGCTCTTCATTGGAT-CAGCAGTAAGAATGCAACATTCCCAGAACGAGTTGTTGC 281655
Query 133519 TTTTGCTGTAGTAGAGGGCAttt--ttttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCT 133575
||||| | || || || |||| |||||| | ||| |||| |||| ||||||||
Sbjct 281656 ATTTGCAGCTGTGGAAGGAATTTTCTTTTCA---GGAAGTTTTGCTGCTATCTTTTGGCT 281712
Query 133576 TAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGA 133635
|| || || ||| || | || |||||| |||||||| || |||||||| | || ||
Sbjct 281713 CAAGAAACGGGGTCTTATGCCAGGACTGACATTTTCTAATGAGCTTATTTCTCGCGATGA 281772
Query 133636 GGCACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATTAGAGCGACCAC--TCAAA 133693
| | || || ||||| |||| | ||| | | | | | || || ||
Sbjct 281773 AGGTTTGCATTGTGATTTTGCTTGTTTAATGTTTTCTTATATTGTTCAAAAACCATC-AA 281831
Query 133694 AAGAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAAT 133753
|||| || | ||| || ||| | || || ||| ||||||| |||||| | | |
Sbjct 281832 AAGAGCGAG-TAACAGATATAATTCGCGATGCAGTTAAAATTGAACAGGAATTTTTAACT 281890
Query 133754 AGTGCTCTGCC-GT--GCCGTTTAATTGGTATGAATGATGTGCTGATGCAGCGTTATATT 133810
|||| |||| || ||| |||||||||||||| |||||| | |||||
Sbjct 281891 GATGCTTTGCCTGTAAGCC---TAATTGGTATGAATTGCAAACTGATGTCTCAGTATATC 281947
Query 133811 GAATTTGTAGCTGACAGATTGGCCGTTCAGTTAGGTGGGGATAAGATT--TACGGTTCCG 133868
||||||||||||||| | | || |||| ||| | ||||||||| || ||| |
Sbjct 281948 GAATTTGTAGCTGACCGTCTTTTAGTAGAGTTGGGTTGTGATAAGATTTATAATGTTAAG 282007
Query 133869 CCAATCCATTCGACTGGATGGAGAGCATTAGCATTGAATCAAAGACTAATTTCTTCGAGG 133928
||||| || |||| ||| | | ||| || ||| ||||| |||||||| ||
Sbjct 282008 --AATCCGTTTGACTTTATGAACAAAATTTCCACTGATGGCAAGACAAATTTCTTTGAAA 282065
Query 133929 CGAGGGTAGCCGAATA 133944
|| |||| |||||
Sbjct 282066 AGAAAGTAGGTGAATA 282081
>seq296
Length=775295
Score = 89.7 bits (98), Expect = 2e-12
Identities = 304/465 (65%), Gaps = 14/465 (3%)
Strand=Plus/Minus
Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCT--TAA 288940
||||| ||||| ||| || || || ||||||||||| || ||| | | || | | |
Sbjct 92806 TCTAAAATATCAATTCTATTGGTAGCAGCCAATACAAC--TACATTTGTTGTGGTGTTGA 92749
Query 288941 ATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC 289000
| |||||||| || | ||||||||| || | |||| |||| || | || |
Sbjct 92748 AGCCATCCATTTCAACTAGGAGTTGATTAAGAGTATTTTCCTGTTCAGAAT--GGCCCCC 92691
Query 289001 TTGAATCACCCGAATCG-CTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059
|| | | | || | ||| ||| | || || || || ||||| ||||| || |
Sbjct 92690 ---AA--AACTGCGTCCACCCCTCTTTCTTCCGACCGCGTCTATTTCATCAATAAATAGG 92636
Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGA 289119
| ||| || | || || | || || || ||||| |||| ||| | || | ||| |
Sbjct 92635 ATACAGGGGGCATGTTTCCGTGCCATAGCGAATAAATCTCGTACCCTTGACGGTCCCACG 92576
Query 289120 CCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCG 289179
|| ||| ||||||| | |||||| || | || || || |||| || ||||||||
Sbjct 92575 CCCACAAACATTTCCAAAAATTCCGATCCAGAAACGGTTATAAATGGAACGTTTGCTTCA 92516
Query 289180 CCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACT 289239
||||| ||| | || || | |||||| || || ||||| ||||| || | |
Sbjct 92515 CCTGCAGTTGCTTTGGCTAGCAATGTCTTGCCAGTACCAGGAGGTCCTGTCAACATTGCC 92456
Query 289240 CCCTTTGGTACTTTTGCCCCAGCAGACT-TATATTTCTCAGGGCTCTTTAAAAATTCTAC 289298
||||| || | ||| || || || || | || | | ||| |||||| || | ||
Sbjct 92455 CCCTTAGGAATTTTGGCTCCTA-AGTCTATGTACTGTTGGGGGTTCTTTAGGAAATTAAC 92397
Query 289299 AATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343
| |||| | ||| ||| || || ||||| |||||||||||
Sbjct 92396 GAATTCCATTATTTCGATTTTGGCTTCTTCACAACCTGCTACATC 92352
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1471742395639956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |