Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq12 149 2e-30 seq296 89.7 2e-12 >seq12 Length=2314596 Score = 149 bits (164), Expect = 2e-30 Identities = 558/856 (65%), Gaps = 28/856 (3%) Strand=Plus/Plus Query 133103 GAGATTTGGCAGATGTATAAAAAACAGCAAGATTTATTTTGGACTTCAACTGAAGTAGAT 133162 || |||||| | | ||| || || ||| || || ||||| || |||||||| Sbjct 281240 GACATTTGGGAAAAGTACAAGGAAGCTGAAGCTTCCTTCTGGACAACAGAAGAAGTAGAC 281299 Query 133163 TTATCCAAAGACCCAGCCCACTGGGAAGCCCTTACTGGGGATGAAAAACATTTTATTTCT 133222 | || || |||| ||||||||||| | | ||||||| ||||| ||||| Sbjct 281300 CTTTCTAAGGACCTTGCCCACTGGGATAAGTTGTCAAATGATGAAAGGCATTTCATTTCA 281359 Query 133223 -ATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGTTCTTGAAAATTTAGGAACACG 133281 ||| || || ||||||||||| |||||| ||||| |||||| | | | | Sbjct 281360 CATGTACTT-GCCTTTTTTGCTGCATCTGATGGAATTGTAAATGAAAACCTTGTAGAGAG 281418 Query 133282 GTTTATGGGAGAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGAT 133341 || | |||||| ||| | | || || ||| ||||||||| | || ||||| || Sbjct 281419 ATTCAGTCAAGAAGTACAAGTAACTGAGGCTCGTTGCTTTTATGGTTTCCAAATTGCCAT 281478 Query 133342 GGAAAATATCCATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGT 133401 |||||||||||||| | ||| |||||| ||||| ||||| || || | | Sbjct 281479 TGAAAATATCCATTCAGAAATGTATAGTACTCTCATTGACACTTATATATTTGACCCAGA 281538 Query 133402 CCAGAAGCACAAACTATTCAACGCCATT--AGCGAATTTCCTTGTATTAAAAAGAAATCT 133459 |||| | || ||||| || ||| | | | | |||||| |||| ||||| || Sbjct 281539 AGAGAAAGAATTTCTTTTCAATGCTATTGAAACCA--TGCCTTGTGTTAAGAAGAAGGCT 281596 Query 133460 GACTGGGCTATTAAATGGATCCAGGA-CAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGC 133518 || |||||| || | ||||| ||| | ||| ||| | || | || | ||||| Sbjct 281597 GATTGGGCTCTTCATTGGAT-CAGCAGTAAGAATGCAACATTCCCAGAACGAGTTGTTGC 281655 Query 133519 TTTTGCTGTAGTAGAGGGCAttt--ttttCAGTGGTGCGTTCTGCT-CTATTTTTTGGCT 133575 ||||| | || || || |||| |||||| | ||| |||| |||| |||||||| Sbjct 281656 ATTTGCAGCTGTGGAAGGAATTTTCTTTTCA---GGAAGTTTTGCTGCTATCTTTTGGCT 281712 Query 133576 TAAAAAGCGTGGTATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGA 133635 || || || ||| || | || |||||| |||||||| || |||||||| | || || Sbjct 281713 CAAGAAACGGGGTCTTATGCCAGGACTGACATTTTCTAATGAGCTTATTTCTCGCGATGA 281772 Query 133636 GGCACTTCACACCGAATTTGCCGTTTTACTTCACTCTAAATTAGAGCGACCAC--TCAAA 133693 | | || || ||||| |||| | ||| | | | | | || || || Sbjct 281773 AGGTTTGCATTGTGATTTTGCTTGTTTAATGTTTTCTTATATTGTTCAAAAACCATC-AA 281831 Query 133694 AAGAATAAGATTGAAGAAATTATTAGAGAAGCGGTTGAAATTGAGGTTGAATTTATCAAT 133753 |||| || | ||| || ||| | || || ||| ||||||| |||||| | | | Sbjct 281832 AAGAGCGAG-TAACAGATATAATTCGCGATGCAGTTAAAATTGAACAGGAATTTTTAACT 281890 Query 133754 AGTGCTCTGCC-GT--GCCGTTTAATTGGTATGAATGATGTGCTGATGCAGCGTTATATT 133810 |||| |||| || ||| |||||||||||||| |||||| | ||||| Sbjct 281891 GATGCTTTGCCTGTAAGCC---TAATTGGTATGAATTGCAAACTGATGTCTCAGTATATC 281947 Query 133811 GAATTTGTAGCTGACAGATTGGCCGTTCAGTTAGGTGGGGATAAGATT--TACGGTTCCG 133868 ||||||||||||||| | | || |||| ||| | ||||||||| || ||| | Sbjct 281948 GAATTTGTAGCTGACCGTCTTTTAGTAGAGTTGGGTTGTGATAAGATTTATAATGTTAAG 282007 Query 133869 CCAATCCATTCGACTGGATGGAGAGCATTAGCATTGAATCAAAGACTAATTTCTTCGAGG 133928 ||||| || |||| ||| | | ||| || ||| ||||| |||||||| || Sbjct 282008 --AATCCGTTTGACTTTATGAACAAAATTTCCACTGATGGCAAGACAAATTTCTTTGAAA 282065 Query 133929 CGAGGGTAGCCGAATA 133944 || |||| ||||| Sbjct 282066 AGAAAGTAGGTGAATA 282081 >seq296 Length=775295 Score = 89.7 bits (98), Expect = 2e-12 Identities = 304/465 (65%), Gaps = 14/465 (3%) Strand=Plus/Minus Query 288883 TCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTTTGCT--TAA 288940 ||||| ||||| ||| || || || ||||||||||| || ||| | | || | | | Sbjct 92806 TCTAAAATATCAATTCTATTGGTAGCAGCCAATACAAC--TACATTTGTTGTGGTGTTGA 92749 Query 288941 ATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTTGAACCTC 289000 | |||||||| || | ||||||||| || | |||| |||| || | || | Sbjct 92748 AGCCATCCATTTCAACTAGGAGTTGATTAAGAGTATTTTCCTGTTCAGAAT--GGCCCCC 92691 Query 289001 TTGAATCACCCGAATCG-CTCCtttttttACCAACAGCATCAATTTCGTCAATGAAAATC 289059 || | | | || | ||| ||| | || || || || ||||| ||||| || | Sbjct 92690 ---AA--AACTGCGTCCACCCCTCTTTCTTCCGACCGCGTCTATTTCATCAATAAATAGG 92636 Query 289060 ACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATGCTCCAAGA 289119 | ||| || | || || | || || || ||||| |||| ||| | || | ||| | Sbjct 92635 ATACAGGGGGCATGTTTCCGTGCCATAGCGAATAAATCTCGTACCCTTGACGGTCCCACG 92576 Query 289120 CCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAATGAATGTTACATTTGCTTCG 289179 || ||| ||||||| | |||||| || | || || || |||| || |||||||| Sbjct 92575 CCCACAAACATTTCCAAAAATTCCGATCCAGAAACGGTTATAAATGGAACGTTTGCTTCA 92516 Query 289180 CCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCTAATAGAACT 289239 ||||| ||| | || || | |||||| || || ||||| ||||| || | | Sbjct 92515 CCTGCAGTTGCTTTGGCTAGCAATGTCTTGCCAGTACCAGGAGGTCCTGTCAACATTGCC 92456 Query 289240 CCCTTTGGTACTTTTGCCCCAGCAGACT-TATATTTCTCAGGGCTCTTTAAAAATTCTAC 289298 ||||| || | ||| || || || || | || | | ||| |||||| || | || Sbjct 92455 CCCTTAGGAATTTTGGCTCCTA-AGTCTATGTACTGTTGGGGGTTCTTTAGGAAATTAAC 92397 Query 289299 AATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATC 289343 | |||| | ||| ||| || || ||||| ||||||||||| Sbjct 92396 GAATTCCATTATTTCGATTTTGGCTTCTTCACAACCTGCTACATC 92352 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471742395639956