Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq310 223 3e-53 seq218 172 5e-38 seq428 132 4e-26 seq25 131 2e-25 >seq310 Length=366558 Score = 223 bits (246), Expect = 3e-53 Identities = 815/1263 (65%), Gaps = 30/1263 (2%) Strand=Plus/Plus Query 138672 CCAGTCCCACAAATCGCTAGGTTTTTTGTTCCACATATCGTACTGTAACATTCCCAAACT 138731 ||| |||||||| || | || |||| ||||||||||| |||||||| || ||| || Sbjct 101027 CCAATCCCACAAGTCTGTGGGAGTTTTATTCCACATATCATACTGTAAAATCCCCTTGCT 101086 Query 138732 TGCGGGACTGCCTTCGTACGAATCGTATAC--ACCAAACTCTTGC---GCCAACTCGTTG 138786 | | ||||| ||||| || | | | ||| |||| |||| | || | || | Sbjct 101087 TACAGGACTACCTTCATAAG--TGGAATAAGGACCA---TCTTTCTCTGCGATTTCACAG 101141 Query 138787 CTCGCCTCGAGCGCACCATAGTAAATAGTTTCGGCAATCTGCTGATTGAGCAATCGG-GC 138845 || || || || ||||| || || | ||||||| ||| || ||||| || ||| || Sbjct 101142 CTTGCTTCAAGTGCACCGTAATACAAAGTTTCGAAAATTTGTTGATTAAGTT-TCGCAGC 101200 Query 138846 CTCGGCGCTCTCGTACGGCATGCGGAGCATCGTGAACGCGTCGGCCAGCCCTTGCACGCC 138905 || | ||| || || | || || || | | || || ||||| | ||||| || || Sbjct 101201 TTCAGGGCTGTCATAAGCTATACGAAGTAAAATAAAAGCATCGGCTAAACCTTGTACACC 101260 Query 138906 CACTCCGACAGGGCGATGGCGCAGATTTGACGCTTTTGCGGCTTCGATAGGATAATAGTT 138965 | ||| | || | || | || |||||| | ||| || || | |||||||| || Sbjct 101261 GATTCCAATCGGTCTGTGCCTCACATTTGAGGTTTTGGCCTCTGGTACGGGATAATAATT 101320 Query 138966 TACATCGATGATTTTGTTTAAATTTCGCACGACCACCTTAGTCGTATGCTTTAATCGTTC 139025 || ||||| |||||||||| ||| | || || || || | | ||||| | Sbjct 101321 AACGTCGATAATTTTGTTTAGGTTTTTCGTAACAACTTTGGTGATTTCTTTTAACTTCTT 101380 Query 139026 AAAATCGTATGTGCCCCCGTTGTCG-TCGACGACGTCGACAAATTTGTTGACACAAATCG 139084 ||||||||| | || || ||| | ||| ||||| | || || || || Sbjct 101381 AAAATCGTAGGA-------TTTTCTATCG--GGCGTT-ACAAACATATTCACTGCAAGCG 101430 Query 139085 AGGCTATGTTGCACACCGCCACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACA 139144 | || | || || ||||| |||||||| ||| | ||||| |||||||| | || | Sbjct 101431 ATGCCAAATTACAGACCGCAACTTCGTCAGGGGAAGTATATTCAACAATTTCTGTGCATA 101490 Query 139145 AATTACTACACTTGATCGTACCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTT 139204 |||| || | | || || ||||| ||||||||||||||||||| ||| || ||||||| Sbjct 101491 AATTGCTGCTTCTAATTGTTCCTAAGTTTTGTTGATTGCTTTTTCTGTTGCATGCATCTT 101550 Query 139205 TGTAAAGCATATACGGTGTGCCAGTTTCCACTTGTGTCTCTATAATGAATTTGAACAAGT 139264 | || ||||| | || || |||||||| ||||| | | || || | |||| | Sbjct 101551 TATATAGCATGAAAGGAGTCCCAGTTTCGACTTGAGAAACAATTATAGCATGCCACAATT 101610 Query 139265 CCCTAGCTTGTATTTGACGCACGTAAAGTTCGTCGCGCTCGTACTTTTCGTAGAGTTCGT 139324 | ||| ||| |||| | ||| | || || |||||||| || | | | Sbjct 101611 TCTGAGCAGGTACTTGAGAAATGTATTTACCTTCTGCTTCATACTTTTCATACAACTGTT 101670 Query 139325 CGAATCGTTCACCGTAGGCGTCAGAAAGATCGCGACACTTGTCAGGACACATGAGCGACC 139384 | || ||| || | || |||| || |||| | | ||||||||| || |||| Sbjct 101671 CAAACTTTTCTCCCCAATTATCGTAAAGTCCGGGACATTGATGAGGACACATCAGTGACC 101730 Query 139385 ATACGCCGTTCGCCTTGACGCGCCTCATGAACAGATCCGGAATCCACAAAGCGAACAGCA 139444 | || || | || | |||| |||| ||| || ||||| | || | | || Sbjct 101731 AGTGCCCATTTTGTTCAACTCTTTTCATAAACAAATCTGGTATCCATAGGGCATAAAACA 101790 Query 139445 AATCGCGCGCCTTCTTATCTTCCGAACCCATGTTACGTTTCATGTTAAGGAAATCAAAAA 139504 |||| | || || | ||||| || | || ||||| || | || ||||| | Sbjct 101791 AATCTCTTGCTCTCATCTCTTCTTTTCCTGTATTTTTTTTCAAATTTAAAAATTCAAATA 101850 Query 139505 CGTCAGCGTGCCATGGTTCCAGATAGATGGCCATTGCGCC---TTTCCGTTTGCCACCTT 139561 ||| || ||||||||||| |||||||| || | || || | || || || |||| Sbjct 101851 TGTCTGCATGCCATGGTTCAAGATAGATAGCAAAAGCACCAGGTCTCTTGTTACCTCCTT 101910 Query 139562 GATCGACGTGTCGTACAGCATTATTGAATACGCGCAACATCGGCTCCAGACCGCTCGCTG 139621 |||| || | || | |||||| || || || | ||| || | | |||| ||| | Sbjct 101911 GATCTACATATCTGGCTAAATTATTAAAAACACGAAGCATAGGAACTAAACCGTTCGAAG 101970 Query 139622 TTCCGTTGGTGCTACGGATGGGACTGTTGCGAGCTCGGACGTCATGTACATTGATGCCGA 139681 | |||||||||| ||| ||| ||| || | | || || | ||||| | Sbjct 101971 TGCCGTTGGTGCCTGCTATGAAACTACCTTTAGCACGTATATTGTGCACGCTTATGCCCA 102030 Query 139682 TTCCGCCGCCAAATTTGGATATTAAAACGCAATCG-CGT-AATGTCTCGTATATACCTCT 139739 || || | |||| || || | | ||| | | || || | | || ||| Sbjct 102031 AACCACCTGCCGATTTAGAAATGAGA--GCACTTGTAGTCAAACATTTACAAATGCCTTC 102088 Query 139740 TATGCTGTCGTCCTGCATCGTGACCAGAAAGCATGACGAAAGTTGCGGTAGTTTCGTGCC 139799 ||||| || || |||| | |||| || || || ||||| || ||| | | || || Sbjct 102089 AATGCTATCATCAGGCATTGCTACCAAGAAACACGATGAAAGCTGAGGTCTTGTGGTCCC 102148 Query 139800 GGCTGCAAACAGAGTAGGACTCGCGTGCGTGAACATTTGTTTCGACATCAATTCGTACGT 139859 |||| |||||||||||||| || || ||||| | | | | ||||| || | |||||| Sbjct 102149 AGCTGAGAACAGAGTAGGACTTGCATGTGTGAAAAATCGATCTGACATTAAATTGTACGT 102208 Query 139860 TTCGATGGCGCTCACAATATCCCTTCCGTGGATACCGACAGAGACTCGCATCAGCATATG 139919 ||| || ||| | ||||| | ||| || || |||| |||||||| ||||| || Sbjct 102209 TTCTATTGCGGCATCTATATCTTTATAGTGAATGCCCACAGCAACTCGCATAAGCATGTG 102268 Query 139920 TTG 139922 ||| Sbjct 102269 TTG 102271 >seq218 Length=661058 Score = 172 bits (190), Expect = 5e-38 Identities = 168/214 (79%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| ||||| | ||||| |||| ||||||||||| || || |||||||| |||| | Sbjct 356224 ATGCAAATCTTCGTCAAAACATTAACTGGTAAAACTATAACCCTTGAAGTAGA-GCCATC 356166 Query 24764 -GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| |||||| || ||| || || |||||||| ||||| || || || ||||| Sbjct 356165 TGATACAATAGAAAACGTCAAAGCCAAAATTCAAGACAAGGAAGGTATCCCACCAGATCA 356106 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | || ||||||||||||||| |||| ||| ||| | | ||||||||||| Sbjct 356105 ACAACGTCTTATTTTTGCCGGGAAACAGTTGGAAGATGGACGAACCCTTTCAGATTATAA 356046 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTG 24916 ||||| |||||||| ||| |||| ||||| ||| Sbjct 356045 TATTCAGAAGGAATCTACATTACATTTGGTATTG 356012 Score = 149 bits (164), Expect = 6e-31 Identities = 162/215 (75%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||||||| |||| || ||||| || || || ||||||||| | | Sbjct 352380 ATGCAAATTTTTGTTAAAACGTTAACTGGAAAAACCATCACACTGGAAGTAGAACCATCA 352321 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || |||||||| ||||||||||| || ||||| || || Sbjct 352320 GACACAATTGAAAACGTGAAGGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAG 352261 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 ||||||||||| |||||||| ||||| |||| ||| |||| |||| ||||| ||| Sbjct 352260 CAACGTTTGATTTTTGCCGGTAAACAATTGGAAGATGGTAGAACTTTGTCTGATTACAAC 352201 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 ||||| || || || || || ||||| || || Sbjct 352200 ATTCAGAAAGAGAGTACCCTCCATTTGGTTTTACG 352166 Score = 140 bits (154), Expect = 3e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 24714 TTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAG 24773 || |||| || ||||| |||||||| || || || ||||||||| | | |||||| | | Sbjct 357451 TTGTTAAGACACTAACTGGTAAAACAATCACACTGGAAGTAGAACCGTCAGACACAATTG 357392 Query 24774 AAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGA 24833 ||| || || |||||||| ||||||||||| || ||||| || ||||||||||||| Sbjct 357391 AAAATGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAACAACGTTTGA 357332 Query 24834 TCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGG 24893 | ||||| || || || |||| ||| |||| |||| ||||| |||||||| || | Sbjct 357331 TTTTTGCTGGTAAGCAATTGGAAGATGGTAGAACATTGTCTGATTACAACATTCAGAAAG 357272 Query 24894 AATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 | || || || ||||| || || | || ||||| Sbjct 357271 AGAGTACCCTCCATTTGGTTTTACGTCTTCGTGGAGG 357235 Score = 125 bits (138), Expect = 6e-24 Identities = 161/217 (74%), Gaps = 4/217 (2%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA-C 24762 |||||||||||| | || || || || || || || || || || ||||| | ||||| | Sbjct 356452 ATGCAGATCTTTGTAAAGACTCTTACTGGAAAGACCATCACTCTAGAAGTTG-AGCCATC 356394 Query 24763 CGACACAGTAG-AAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821 || ||| | | ||||| |||| | ||| || |||||||| ||||| || ||||| || | Sbjct 356393 TGATACAATTGAAAACGTTAAAGCTAAA-ATTCAAGACAAGGAAGGTATTCCTCCAGACC 356335 Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881 |||||||| | || ||||| ||||| ||| | || ||| | | | | || || || | Sbjct 356334 AACAACGTCTAATTTTTGCTGGGAAGCAGTTAGAAGATGGTCGCACCCTTTCTGACTACA 356275 Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTGTTGCG 24918 | |||||||| |||||||| || || || || ||||| Sbjct 356274 ATATTCAAAAAGAATCGACTCTGCATTTAGTTTTGCG 356238 Score = 125 bits (138), Expect = 6e-24 Identities = 166/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || || | || || || || |||||||| || || | ||||| ||| | | Sbjct 356680 ATGCAAATTTTCGTGAAGACCCTCACTGGTAAAACGATCACTTTAGAAGTTGAACCATCA 356621 Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 || ||| | || || | |||| ||||| || |||||||||||||| || || || ||||| Sbjct 356620 GATACAATTGAGAATGTTAAAGCAAAA-ATTCAAGACAAAGAAGGCATTCCACCAGATCA 356562 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 || | || |||||||| || ||||| ||||| ||| | | | | || |||||||| Sbjct 356561 GCAGAGGTTAATCTTTGCAGGAAAACAACTGGAAGATGGTCGTACCCTCTCCGATTATAA 356502 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 |||||||| ||||| || || || ||||| | ||||| | ||||| Sbjct 356501 TATTCAAAAAGAATCCACTCTCCATTTGGTACTCAGATTGAGAGGAGG 356454 Score = 111 bits (122), Expect = 1e-19 Identities = 103/131 (79%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 |||||||| ||| |||| || ||||| || ||||| || || || ||||||||| | | Sbjct 352152 ATGCAGATTTTTGTTAAGACACTAACTGGAAAAACCATCACACTGGAAGTAGAACCGTCA 352093 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || |||||||| ||||||||||| || ||||| || ||| Sbjct 352092 GACACAATTGAAAATGTGAAGGCCAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAA 352033 Query 24824 CAACGTTTGAT 24834 ||||||||||| Sbjct 352032 CAACGTTTGAT 352022 Score = 102 bits (112), Expect = 7e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| |||||||| |||| || ||||| || || || ||||||||| | | Sbjct 357233 ATGCAAATTTTTGTTAAAACGTTAACTGGAAAAACCATCACACTGGAAGTAGAACCATCA 357174 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| || || |||||||| ||||||||||| || ||||| || ||| Sbjct 357173 GACACAATTGAAAACGTTAAGGCTAAGATCCAGGACAAAGAAGGTATTCCTCCAGACCAA 357114 Query 24824 CAACGT 24829 |||||| Sbjct 357113 CAACGT 357108 >seq428 Length=160056 Score = 132 bits (146), Expect = 4e-26 Identities = 166/228 (73%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 24703 GATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCAC 24762 |||||| || || | || || |||| ||||| || || || | || || ||| | | Sbjct 129443 GATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTC 129502 Query 24763 CGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822 ||| ||| | |||| || || ||| |||||||| ||||||||||| || || || || Sbjct 129503 CGATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCA 129562 Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882 ||||||| | || ||||| || ||||| |||| ||| | | |||| ||||| || Sbjct 129563 ACAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAA 129622 Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||| ||||||||||||||| | || ||||| || ||||| | ||||| Sbjct 129623 CATCCAAAAGGAATCGACATTGCATTTGGTCTTAAGATTGAGGGGAGG 129670 >seq25 Length=1883024 Score = 131 bits (144), Expect = 2e-25 Identities = 165/227 (73%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763 ||||| || ||| | ||||| || ||||| ||||| || || || || || ||| || | Sbjct 1512251 ATGCAAATTTTTGTGAAAACTCTTACCGGAAAAACAATCACCCTTGAGGTTGAACCCTCA 1512192 Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823 |||||| | |||| ||||| ||||| |||||||| ||||| || ||||| |||||| Sbjct 1512191 GACACAATCGAAAATGTAAAGGCGAAGATTCAAGACAAGGAAGGTATTCCTCCTGATCAA 1512132 Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883 || | || || || || || || || | || ||| | | | || || |||||| Sbjct 1512131 CAGAGGTTAATTTTCGCTGGTAAGCAATTAGAAGATGGCCGTACTCTTTCTGACTATAAC 1512072 Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGG 24930 ||||| || |||||||| ||||||||||||| || || | ||||| Sbjct 1512071 ATTCAGAAAGAATCGACCTTACACTTGGTGTTACGTTTAAGAGGAGG 1512025 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 449875172604640