Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq44 111 1e-19 seq428 95.1 1e-14 >seq44 Length=1668621 Score = 111 bits (122), Expect = 1e-19 Identities = 116/150 (77%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 107162 TTGCCGCACGGACTGCACGGCTTCCACGTGCACGAATTTGGCGACACCAGCAACGGCTGT 107221 ||| || | ||||| ||||| || || |||||||||||||| |||| || |||||||||| Sbjct 465900 TTGACGAAAGGACTCCACGGATTTCATGTGCACGAATTTGGTGACAACACCAACGGCTGT 465959 Query 107222 ACGTCCGCCGGTGAACACTTCAATCCCACATACCAAA-ATCACGGTGCGCCCGACGCCGT 107280 | || ||||||| || |||||| || |||| |||| |||| || || || || || | Sbjct 465960 ATTTCAGCCGGTGCTCATTTCAAT-CCGCATAACAAAGATCATGGAGCTCCTGATGCAGA 466018 Query 107281 AGAAAGGCACGTCGGCGATCTGGGCAACGT 107310 | || ||||| |||||||| || ||||| Sbjct 466019 CGTGAGACACGTTGGCGATCTTGGAAACGT 466048 >seq428 Length=160056 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/226 (69%), Gaps = 2/226 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||||||||| || || |||||||| || || ||||| || | || || || | Sbjct 129444 ATGCAAATATTCGTGAAGACTTTAACGGGTAAGACCATCACTTTAGAGGTCGAACCGTCC 129503 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| ||| | || || || || || |||||||| | || || ||| Sbjct 129504 GATACAATCGAAAATGTGAAGGCAAAAATCCAAGATAAAGAAGGAATTCCACCTGACCAA 129563 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || |||| ||| || ||||| |||| |||| | | || || | ||||||||| Sbjct 129564 CAACGTCTAATTTTTGCTGGAAAACAATTGGAAGATGGCCGTACTTTGTCTGATTACAAC 129623 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGG 110498 || ||||| ||||| || ||||| |||| |||||| | |||||| Sbjct 129624 ATCCAAAAGGAATCGACATTGCATTTGGTCTTAAGATT--GAGGGG 129667 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412821534350084