Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_022098.1
Length=2473870
Score E
Sequences producing significant alignments: (Bits) Value
seq12 91.5 2e-12
>seq12
Length=2314596
Score = 91.5 bits (100), Expect = 2e-12
Identities = 198/293 (68%), Gaps = 9/293 (3%)
Strand=Plus/Minus
Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436
|| || ||||| || || || ||||||||||||||||| ||| ||||| || || ||
Sbjct 281739 AGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAG 281680
Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496
|| || || || || || ||||| | || | || || | || || || |||
Sbjct 281679 AAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGT-----TGCATTCT 281625
Query 794497 T--TGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGA 794554
| || ||||||| | | ||||| || ||||| ||| | || | |||| || || |
Sbjct 281624 TACTGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAA 281565
Query 794555 TGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAG-GAGC 794613
| || || || || ||||| | ||||| | || ||||| ||||| | |
Sbjct 281564 TAGCATTGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTAC 281505
Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666
| || | ||||| ||||| ||||| ||||| || ||||| |||||||||||
Sbjct 281504 TA-TACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCA 281453
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 7915822178250732
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |