Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq12 91.5 2e-12 >seq12 Length=2314596 Score = 91.5 bits (100), Expect = 2e-12 Identities = 198/293 (68%), Gaps = 9/293 (3%) Strand=Plus/Minus Query 794377 AGGCCGGGCATGAGGCCGCGCTTCTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAA 794436 || || ||||| || || || ||||||||||||||||| ||| ||||| || || || Sbjct 281739 AGTCCTGGCATAAGACCCCGTTTCTTGAGCCAAAAGATAGCAGCAAAACTTCCTGAAAAG 281680 Query 794437 AAGATGCCCTCGACGGCGGCAAAGCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCT 794496 || || || || || || ||||| | || | || || | || || || ||| Sbjct 281679 AAAATTCCTTCCACAGCTGCAAATGCAACAACTCGTTCTGGGAATGT-----TGCATTCT 281625 Query 794497 T--TGTTGATCCACTTCATCGCCCACTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGA 794554 | || ||||||| | | ||||| || ||||| ||| | || | |||| || || | Sbjct 281624 TACTGCTGATCCAATGAAGAGCCCAATCAGCCTTCTTCTTAACACAAGGCATGGTTTCAA 281565 Query 794555 TGGCGCGAAAGAGGTGGTCCTTCTCGACCGGGTCCTTGACGTAGGTGTCGATGAG-GAGC 794613 | || || || || ||||| | ||||| | || ||||| ||||| | | Sbjct 281564 TAGCATTGAAAAGAAATTCTTTCTCTTCTGGGTCAAATATATAAGTGTCAATGAGAGTAC 281505 Query 794614 GAGTAGGTCTCTGAGTGGATGTTTTCGATGGCGATCTGGAAGCCATAAAAGCA 794666 | || | ||||| ||||| ||||| ||||| || ||||| ||||||||||| Sbjct 281504 TA-TACATTTCTGAATGGATATTTTCAATGGCAATTTGGAAACCATAAAAGCA 281453 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915822178250732