Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_022646.1
Length=101818
Score E
Sequences producing significant alignments: (Bits) Value
seq218 105 4e-18
>seq218
Length=661058
Score = 105 bits (116), Expect = 4e-18
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
|| || ||||| || ||||| || ||| |||| |||| || | ||||| || || ||
Sbjct 356262 TCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAA 356321
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || ||||| |||||| | || | || |||||||| | ||||| ||| ||| |
Sbjct 356322 ATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTT 356381
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
| || | ||| | ||| || || | || ||||||||||| || || |||||||||
Sbjct 356382 TCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACA 356441
Query 34967 AAGATCTGCAT 34977
|||||||||||
Sbjct 356442 AAGATCTGCAT 356452
Score = 96.9 bits (106), Expect = 2e-15
Identities = 136/191 (71%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846
||||||||||| ||||| || || ||| | || |||| |||| || || ||||| ||
Sbjct 356034 TCCTTCTGAATATTATAATCTGAAAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAA 356093
Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906
|| || ||||| || ||| | || | || |||||||| | ||||| ||||||| |
Sbjct 356094 ATAAGACGTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTT 356153
Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966
|||| | ||| | ||| || |||| |||||| || || || || | || || ||
Sbjct 356154 TCTATTGTATCAGATGGCTCTACTTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACG 356213
Query 34967 AAGATCTGCAT 34977
||||| |||||
Sbjct 356214 AAGATTTGCAT 356224
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Plus
Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808
||||||| ||||| || || |||| || | ||| || || ||||| ||||| || |
Sbjct 356452 TTCCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGG 356511
Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868
| ||| | || |||| |||||||| ||||| || ||||| | | ||||| ||| | |
Sbjct 356512 AGAGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTG 356571
Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926
| | || || ||||| | |||||| ||| || || || || | || | ||
Sbjct 356572 GAATGCCTTCTTTGTCTTGAATTTTTGCTTTAAC--ATTCTCAATTGTATCTGATGGTTC 356629
Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977
|| || | || || || || || ||||||||||| || || || |||||
Sbjct 356630 AACTTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 325676970108572
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |