Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq218 105 4e-18 >seq218 Length=661058 Score = 105 bits (116), Expect = 4e-18 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 || || ||||| || ||||| || ||| |||| |||| || | ||||| || || || Sbjct 356262 TCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAA 356321 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| |||||| | || | || |||||||| | ||||| ||| ||| | Sbjct 356322 ATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTAGCTTTAACGTTT 356381 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 | || | ||| | ||| || || | || ||||||||||| || || ||||||||| Sbjct 356382 TCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACA 356441 Query 34967 AAGATCTGCAT 34977 ||||||||||| Sbjct 356442 AAGATCTGCAT 356452 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 34787 TCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAG 34846 ||||||||||| ||||| || || ||| | || |||| |||| || || ||||| || Sbjct 356034 TCCTTCTGAATATTATAATCTGAAAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAA 356093 Query 34847 ATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGAT 34906 || || ||||| || ||| | || | || |||||||| | ||||| ||||||| | Sbjct 356094 ATAAGACGTTGTTGATCTGGTGGGATACCTTCCTTGTCTTGAATTTTGGCTTTGACGTTT 356153 Query 34907 GCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACA 34966 |||| | ||| | ||| || |||| |||||| || || || || | || || || Sbjct 356154 TCTATTGTATCAGATGGCTCTACTTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACG 356213 Query 34967 AAGATCTGCAT 34977 ||||| ||||| Sbjct 356214 AAGATTTGCAT 356224 Score = 82.4 bits (90), Expect = 5e-11 Identities = 158/231 (68%), Gaps = 4/231 (2%) Strand=Plus/Plus Query 34749 TTCCTCCCCTCAACCTCAGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCG 34808 ||||||| ||||| || || |||| || | ||| || || ||||| ||||| || | Sbjct 356452 TTCCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGG 356511 Query 34809 ATAGGCTGCGCTCATCGTCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCG 34868 | ||| | || |||| |||||||| ||||| || ||||| | | ||||| ||| | | Sbjct 356512 AGAGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTG 356571 Query 34869 GCACCCCCTCCTTGTCGTTTATTTTTTGTTTGACGGATGCT--ATCGATTCATTGGCCTC 34926 | | || || ||||| | |||||| ||| || || || || | || | || Sbjct 356572 GAATGCCTTCTTTGTCTTGAATTTTTGCTTTAAC--ATTCTCAATTGTATCTGATGGTTC 356629 Query 34927 GACATCAACGGTTATGGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || | || || || || || ||||||||||| || || || ||||| Sbjct 356630 AACTTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCAT 356680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325676970108572