Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq296 96.9 5e-15
>seq296
Length=775295
Score = 96.9 bits (106), Expect = 5e-15
Identities = 221/320 (69%), Gaps = 21/320 (7%)
Strand=Plus/Plus
Query 180545 CGAAAAGAAGGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAA 180604
||| |||| || || || || || || ||||| ||||| ||| | ||| |||||| |
Sbjct 25569 CGAGAAGAGGGAGACTTGGGTCCGATATATGGGTTTCAGTGGCGTCATTTTGGAGCTGAG 25628
Query 180605 TATATTGAC-TGTGATACCAACTATATCGGGCA---AGGTATAGACCAATTAAGCCAAGT 180660
|||| | | || || |||| || || | | ||| || || ||||| || |||||
Sbjct 25629 TATAGAGGCATGCGAG-CCAATTA---CGCGAATGAAGGAATCGATCAATTGAGTCAAGT 25684
Query 180661 TATAGAAACTATAAAAAATAATCCCGAATGCC-GAAGAATAATCATAGATAGTTGGAATG 180719
|| | || || |||||| |||| ||||| |||| |||||| || | ||||||
Sbjct 25685 GATTAATACAATCAAAAATTATCC-GAATGATAGAAGGATAATCTTATGTTCGTGGAATC 25743
Query 180720 -TATC-ACAATTACCAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGT 180777
| | ||| ||||| | |||||||||||||| ||||| ||| | |||||||||| ||
Sbjct 25744 CTGTGGACA--TACCACAAATGGCTCTTCCACCCTGTCATTGTCTCGTACAATTTTTCGT 25801
Query 180778 TAGAAATAA--AATTTATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTA 180835
| ||| | |||| || | ||| || || |||||||| || ||| | ||| |
Sbjct 25802 AAATAATGACGAATTGTCTTCG-TTG----TTATACCAAAGATCGGCCGATATGGGACTG 25856
Query 180836 GGTGTACCATATAATATTGC 180855
|| ||||| | || |||||
Sbjct 25857 GGGGTACCGTTCAACATTGC 25876
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655247334292000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |