Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_023719.1 Length=497513 Score E Sequences producing significant alignments: (Bits) Value seq21 100 9e-16 >seq21 Length=1700594 Score = 100 bits (110), Expect = 9e-16 Identities = 117/157 (75%), Gaps = 1/157 (1%) Strand=Plus/Plus Query 46549 AAAAAATGGAAATAGGCATGGGTaaaaaaaCAATTTTGTTTTTAGACGAAATACATCGTT 46608 |||||||| || || | || ||||| ||||| | ||| | |||||||||||| | | Sbjct 1198200 AAAAAATG-AATTAAAATTTGGAAAAAAGACAATAATATTTATGGACGAAATACATAGAT 1198258 Query 46609 TCAATAAAGGACAGCAAGATTCGTTATTACCTTATGTTGAAGATGGAACAATTACGTTAA 46668 |||||||| |||| |||||||| || | | ||||||| |||| || || |||| Sbjct 1198259 TCAATAAAAGACAACAAGATTCTTTTCTTTTATGTGTTGAAAATGGTGATATAACATTAA 1198318 Query 46669 TTGGTGCAACAACTGAAAATCCATTTTTTGAAATTAA 46705 |||| || ||||| |||||||||| ||| | ||||| Sbjct 1198319 TTGGAGCTACAACAGAAAATCCATCATTTTATATTAA 1198355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1591829059348224