Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_024450.1 Length=204054 Score E Sequences producing significant alignments: (Bits) Value seq195 89.7 7e-13 seq54 89.7 7e-13 >seq195 Length=555810 Score = 89.7 bits (98), Expect = 7e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| |||||||||||| ||||| |||| ||||| | ||||||||| ||||||||| Sbjct 94770 AGTCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCCGGGTTCGAT 94711 Query 11787 TCCCCGACGAGGAGGG 11802 |||| | || |||||| Sbjct 94710 TCCCGGCCGGGGAGGG 94695 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | ||||||||| ||||||||||| Sbjct 94768 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCCGGGTTCGATTC 94709 Query 8718 CCCGACGAGGAG 8729 || | || |||| Sbjct 94708 CCGGCCGGGGAG 94697 Score = 82.4 bits (90), Expect = 1e-10 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 139353 CTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCACTA 139412 |||| || | |||| |||||||| ||||||||| | |||| |||||||| ||||||||| Sbjct 94697 CTCCCCGGCCGGGAATCGAACCCGGGTCTCCCGCGTGACAGGCGGGGATACTAACCACTA 94756 Query 139413 TACTAACGAGGATTT 139427 ||||| |||||| || Sbjct 94757 TACTACCGAGGACTT 94771 >seq54 Length=1232090 Score = 89.7 bits (98), Expect = 7e-13 Identities = 63/72 (88%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 8658 TCCTCGTTAGTATAGTGGTTAGTATTCCCGTCTGTCGCACGGGAGACCGGGGTTCGATTC 8717 |||||| |||||||||||||||||| |||| ||||| | ||||||||| ||||||||||| Sbjct 914860 TCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCCGGGTTCGATTC 914801 Query 8718 CCCGACGAGGAG 8729 || | || |||| Sbjct 914800 CCGGCCGGGGAG 914789 Score = 86.0 bits (94), Expect = 8e-12 Identities = 65/77 (84%), Gaps = 0/77 (0%) Strand=Plus/Plus Query 139351 AACTCCTCGTCGGGGATTCGAACCCCGGTCTCCCGTGCGACAAACGGGGATATTAACCAC 139410 |||||| || | |||| |||||||| ||||||||| | |||| |||||||| ||||||| Sbjct 914787 AACTCCCCGGCCGGGAATCGAACCCGGGTCTCCCGCGTGACAGGCGGGGATACTAACCAC 914846 Query 139411 TATACTAACGAGGATTT 139427 ||||||| |||||| || Sbjct 914847 TATACTACCGAGGACTT 914863 Score = 86.0 bits (94), Expect = 8e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 11728 AGTCCTCGTTAGTATAGTGGT-AGTATGCCCGTCTGTCGCACGGGAGACCGGGGTTCGAT 11786 |||||||| |||||||||||| ||||| |||| ||||| | ||||||||| ||||||||| Sbjct 914862 AGTCCTCGGTAGTATAGTGGTTAGTATCCCCGCCTGTCACGCGGGAGACCCGGGTTCGAT 914803 Query 11787 TCCCCGACGAGGAG 11800 |||| | || |||| Sbjct 914802 TCCCGGCCGGGGAG 914789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 652812255686720