Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq218 91.5 1e-13
seq25 86.0 6e-12
>seq218
Length=661058
Score = 91.5 bits (100), Expect = 1e-13
Identities = 148/208 (71%), Gaps = 4/208 (2%)
Strand=Plus/Plus
Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513
||||| | || || ||||| || |||||||| || | ||| ||| | || || |
Sbjct 356247 AAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCA-TCTTCTAA 356305
Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573
|||||| || || |||| || || || ||||| ||||| || ||||||||||| |||
Sbjct 356306 CTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTC-TTGAA 356364
Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632
||| |||| | | | |||| || || | ||||| || || | |||| ||| || |
Sbjct 356365 TTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGTCTTTC 356424
Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660
| || ||||| ||||| || ||||||||
Sbjct 356425 CAGTAAGAGTCTTTACAAAGATCTGCAT 356452
>seq25
Length=1883024
Score = 86.0 bits (94), Expect = 6e-12
Identities = 107/147 (73%), Gaps = 0/147 (0%)
Strand=Plus/Plus
Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574
||||| || ||| |||| | || ||| || || ||||| || ||||||||||| |||
Sbjct 1512106 TGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATC 1512165
Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634
|| ||| | | || | ||||| | ||| || || || | ||||| ||||| |||
Sbjct 1512166 TTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTTTTTCCG 1512225
Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661
|| |||||||| || ||||| ||||||
Sbjct 1512226 GTAAGAGTTTTCACAAAAATTTGCATG 1512252
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483396701473120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |