Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq218 91.5 1e-13 seq25 86.0 6e-12 >seq218 Length=661058 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/208 (71%), Gaps = 4/208 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 ||||| | || || ||||| || |||||||| || | ||| ||| | || || | Sbjct 356247 AAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCA-TCTTCTAA 356305 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGAT 133573 |||||| || || |||| || || || ||||| ||||| || ||||||||||| ||| Sbjct 356306 CTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTGTC-TTGAA 356364 Query 133574 CTTTTGCTTGAGC-TGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGC 133632 ||| |||| | | | |||| || || | ||||| || || | |||| ||| || | Sbjct 356365 TTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATGGTCTTTC 356424 Query 133633 CGGTCAGAGTTTTTACGAAAATCTGCAT 133660 | || ||||| ||||| || |||||||| Sbjct 356425 CAGTAAGAGTCTTTACAAAGATCTGCAT 356452 >seq25 Length=1883024 Score = 86.0 bits (94), Expect = 6e-12 Identities = 107/147 (73%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 133515 TGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATC 133574 ||||| || ||| |||| | || ||| || || ||||| || ||||||||||| ||| Sbjct 1512106 TGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGGAATACCTTCCTTGTCTTGAATC 1512165 Query 133575 TTTTGCTTGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCG 133634 || ||| | | || | ||||| | ||| || || || | ||||| ||||| ||| Sbjct 1512166 TTCGCCTTTACATTTTCGATTGTGTCTGAGGGTTCAACCTCAAGGGTGATTGTTTTTCCG 1512225 Query 133635 GTCAGAGTTTTTACGAAAATCTGCATG 133661 || |||||||| || ||||| |||||| Sbjct 1512226 GTAAGAGTTTTCACAAAAATTTGCATG 1512252 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483396701473120