Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq218 152 3e-32 seq25 100 2e-16 seq428 96.9 2e-15 >seq218 Length=661058 Score = 152 bits (168), Expect = 3e-32 Identities = 180/240 (75%), Gaps = 4/240 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || |||||||| | |||||| |||||||| || || |||||||| || ||| Sbjct 352142 AAAATCTGCATTCCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATG 352201 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| || | || | | || ||||||||||| ||||||||||||||||| ||| Sbjct 352202 TTGTAATCAGACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGC 352261 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689 || ||| | || | |||||||||||| || || ||| || | || | ||||| Sbjct 352262 TGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTC-ACGTTTTCAATTGTGTC 352320 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || ||| || || | ||||| ||||| || ||||||||||| ||||| || ||||| Sbjct 352321 TGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380 Score = 136 bits (150), Expect = 3e-27 Identities = 169/229 (74%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||||||| | | |||||||| |||||| |||||||| || || ||||||||| Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAG 356513 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || || | || |||| ||||||||| ||||| || || | |||||||||| | || Sbjct 356514 AGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGA 356573 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||||||| |||||| || || ||||| || | || || || ||| || Sbjct 356574 ATGCCTTCTTTGTCTTGAATTTT-TGCTTTAACATTCTCAATTGTATCTGATGGTTCAAC 356632 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 || | |||||||||||||| || | || || || || || |||||| Sbjct 356633 TTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCATA 356681 Score = 114 bits (126), Expect = 8e-21 Identities = 151/207 (73%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593 |||||| |||||||| || || |||||||| || ||||||||||| || | ||| | | Sbjct 357246 ACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAATGTTCTACC 357305 Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653 || |||||||| || || |||||||||||||| || || ||| | || | ||||||||| Sbjct 357306 ATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTT 357365 Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712 ||| || || ||| |||| || | ||||| | ||| || || | |||| Sbjct 357366 GTCCTGGATCTTGGCCTTC-ACATTTTCAATTGTGTCTGACGGTTCTACTTCCAGTGTGA 357424 Query 33713 TCGTTTTACCTGTTAACGTTTTTACAA 33739 | |||||||| |||| || || |||| Sbjct 357425 TTGTTTTACCAGTTAGTGTCTTAACAA 357451 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||||| | | || |||||||||| || || || || || || ||||| || Sbjct 355997 ACCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGA 356056 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || ||| | || ||||| ||||| ||||||||||| | ||| || |||||| | || Sbjct 356057 AAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGG 356116 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||| | || || | || | || || || || | Sbjct 356117 GATACCTTCCTTGTCTTGAATTTT-GGCTTTGACGTTTTCTATTGTATCAGATGGCTCTA 356175 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750 | |||| || || |||||||| ||||| ||||| || ||||| |||||| Sbjct 356176 CTTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCATA 356225 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||||||||| | ||| || || ||||| ||||| |||||||| || ||||| || || Sbjct 356225 ACCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGA 356284 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || ||||| | || || || || || || |||||||| | ||| || || ||| | || Sbjct 356285 AAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGG 356344 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700 | |||||| ||||| |||||| ||| ||| | ||| || || || || | Sbjct 356345 AATACCTTCCTTGTCTTGAATTTTAGCTTT-AACGTTTTCAATTGTATCAGATGGCTCAA 356403 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | || ||||||||||||||||| Sbjct 356404 CTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| | ||| || || ||||| || ||| ||||| || ||||||||||| || Sbjct 356681 ACCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGA 356740 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | ||| | | || || | || || || |||||||| || | || || ||| | || Sbjct 356741 CAATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGG 356800 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||| ||||| || |||||| | | || | || | ||||| | ||| | Sbjct 356801 AATACCCTCTTTATCTTGAATTTT-AGCCTTTACGTTCTCTATTGTGTCAGACGGTTCTA 356859 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| |||||||| |||| || || ||||| |||||||| Sbjct 356860 CCTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908 >seq25 Length=1883024 Score = 100 bits (110), Expect = 2e-16 Identities = 161/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 ||| ||||| |||||||||||||| |||| || ||||| || ||||| || || || Sbjct 1512024 ACCTCCTCTTAAACGTAACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGA 1512083 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 || || || | || || ||||| || || || ||||| || | ||| ||||| | || Sbjct 1512084 AAGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGG 1512143 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | |||||| ||||| ||| ||| | | |||| || | ||||| | ||| | Sbjct 1512144 AATACCTTCCTTGTCTTGAATCTTC-GCCTTTACATTTTCGATTGTGTCTGAGGGTTCAA 1512202 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | |||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 1512203 CCTCAAGGGTGATTGTTTTTCCGGTAAGAGTTTTCACAAAAATTTGCAT 1512251 >seq428 Length=160056 Score = 96.9 bits (106), Expect = 2e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580 |||| || ||||| | ||| |||||||| | || || ||||| ||||||||||| | Sbjct 129672 CACCTCCCCTCAATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAG 129613 Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640 | | || || | || |||||||||||||| |||||||| | ||| || || || | | Sbjct 129612 ACAAAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTG 129553 Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699 | | |||||||| || ||||| || | |||| || | || ||| | ||| Sbjct 129552 GAATTCCTTCTTTATCTTGGATTTT-TGCCTTCACATTTTCGATTGTATCGGACGGTTCG 129494 Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 || || | ||||| || ||||| ||||| || || || || || ||||| Sbjct 129493 ACCTCTAAAGTGATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328688023752960