Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_025257.1
Length=102759
Score E
Sequences producing significant alignments: (Bits) Value
seq218 152 3e-32
seq25 100 2e-16
seq428 96.9 2e-15
>seq218
Length=661058
Score = 152 bits (168), Expect = 3e-32
Identities = 180/240 (75%), Gaps = 4/240 (2%)
Strand=Plus/Plus
Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570
|||||| || |||||||| | |||||| |||||||| || || |||||||| || |||
Sbjct 352142 AAAATCTGCATTCCACCTCTAAGACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATG 352201
Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630
|||||||| || | || | | || ||||||||||| ||||||||||||||||| |||
Sbjct 352202 TTGTAATCAGACAAAGTTCTACCATCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGC 352261
Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTC 33689
|| ||| | || | |||||||||||| || || ||| || | || | |||||
Sbjct 352262 TGGTCTGGAGGAATACCTTCTTTGTCCTGGATCTTAGCCTTC-ACGTTTTCAATTGTGTC 352320
Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| ||| || || | ||||| ||||| || ||||||||||| ||||| || |||||
Sbjct 352321 TGATGGTTCTACTTCCAGTGTGATGGTTTTTCCAGTTAACGTTTTAACAAAAATTTGCAT 352380
Score = 136 bits (150), Expect = 3e-27
Identities = 169/229 (74%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582
|| |||||||| | | |||||||| |||||| |||||||| || || |||||||||
Sbjct 356454 CCTCCTCTCAATCTGAGTACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAG 356513
Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642
|| || || | || |||| ||||||||| ||||| || || | |||||||||| | ||
Sbjct 356514 AGGGTACGACCATCTTCCAGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGA 356573
Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701
| ||||||||||| |||||| || || ||||| || | || || || ||| ||
Sbjct 356574 ATGCCTTCTTTGTCTTGAATTTT-TGCTTTAACATTCTCAATTGTATCTGATGGTTCAAC 356632
Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
|| | |||||||||||||| || | || || || || || ||||||
Sbjct 356633 TTCTAAAGTGATCGTTTTACCAGTGAGGGTCTTCACGAAAATTTGCATA 356681
Score = 114 bits (126), Expect = 8e-21
Identities = 151/207 (73%), Gaps = 2/207 (1%)
Strand=Plus/Plus
Query 33534 ACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTC 33593
|||||| |||||||| || || |||||||| || ||||||||||| || | ||| | |
Sbjct 357246 ACGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAATGTTCTACC 357305
Query 33594 GTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTT 33653
|| |||||||| || || |||||||||||||| || || ||| | || | |||||||||
Sbjct 357306 ATCTTCCAATTGCTTACCAGCAAAAATCAAACGTTGTTGGTCTGGAGGAATACCTTCTTT 357365
Query 33654 GTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGA 33712
||| || || ||| |||| || | ||||| | ||| || || | ||||
Sbjct 357366 GTCCTGGATCTTGGCCTTC-ACATTTTCAATTGTGTCTGACGGTTCTACTTCCAGTGTGA 357424
Query 33713 TCGTTTTACCTGTTAACGTTTTTACAA 33739
| |||||||| |||| || || ||||
Sbjct 357425 TTGTTTTACCAGTTAGTGTCTTAACAA 357451
Score = 105 bits (116), Expect = 4e-18
Identities = 163/230 (71%), Gaps = 2/230 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
|||||||| | | || |||||||||| || || || || || || ||||| ||
Sbjct 355997 ACCACCTCGAAGCCTCAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGA 356056
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || ||| | || ||||| ||||| ||||||||||| | ||| || |||||| | ||
Sbjct 356057 AAGGGTTCGTCCATCTTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGG 356116
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| | || || | || | || || || || |
Sbjct 356117 GATACCTTCCTTGTCTTGAATTTT-GGCTTTGACGTTTTCTATTGTATCAGATGGCTCTA 356175
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCATA 33750
| |||| || || |||||||| ||||| ||||| || ||||| ||||||
Sbjct 356176 CTTCAAGGGTTATAGTTTTACCAGTTAATGTTTTGACGAAGATTTGCATA 356225
Score = 104 bits (114), Expect = 2e-17
Identities = 162/229 (71%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||||||||| | ||| || || ||||| ||||| |||||||| || ||||| || ||
Sbjct 356225 ACCACCTCTGAGACGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGA 356284
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| ||||| | || || || || || || |||||||| | ||| || || ||| | ||
Sbjct 356285 AAGGGTGCGACCATCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGG 356344
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTCGCTTGATTCCA 33700
| |||||| ||||| |||||| ||| ||| | ||| || || || || |
Sbjct 356345 AATACCTTCCTTGTCTTGAATTTTAGCTTT-AACGTTTTCAATTGTATCAGATGGCTCAA 356403
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| || | ||||| || || || || | || |||||||||||||||||
Sbjct 356404 CTTCTAGAGTGATGGTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452
Score = 86.0 bits (94), Expect = 4e-12
Identities = 158/229 (69%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| ||||| | ||| || || ||||| || ||| ||||| || ||||||||||| ||
Sbjct 356681 ACCTCCTCTAAGACGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGA 356740
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
| ||| | | || || | || || || |||||||| || | || || ||| | ||
Sbjct 356741 CAATGTCCTACCATCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGG 356800
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| ||| ||||| || |||||| | | || | || | ||||| | ||| |
Sbjct 356801 AATACCCTCTTTATCTTGAATTTT-AGCCTTTACGTTCTCTATTGTGTCAGACGGTTCTA 356859
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| |||| ||||| |||||||| |||| || || ||||| ||||||||
Sbjct 356860 CCTCAAGGGTGATTGTTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908
>seq25
Length=1883024
Score = 100 bits (110), Expect = 2e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Plus
Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581
||| ||||| |||||||||||||| |||| || ||||| || ||||| || || ||
Sbjct 1512024 ACCTCCTCTTAAACGTAACACCAAGTGTAAGGTCGATTCTTTCTGAATGTTATAGTCAGA 1512083
Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641
|| || || | || || ||||| || || || ||||| || | ||| ||||| | ||
Sbjct 1512084 AAGAGTACGGCCATCTTCTAATTGCTTACCAGCGAAAATTAACCTCTGTTGATCAGGAGG 1512143
Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700
| |||||| ||||| ||| ||| | | |||| || | ||||| | ||| |
Sbjct 1512144 AATACCTTCCTTGTCTTGAATCTTC-GCCTTTACATTTTCGATTGTGTCTGAGGGTTCAA 1512202
Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
| |||| ||||| ||||| || || | ||||| ||||| || |||||
Sbjct 1512203 CCTCAAGGGTGATTGTTTTTCCGGTAAGAGTTTTCACAAAAATTTGCAT 1512251
>seq428
Length=160056
Score = 96.9 bits (106), Expect = 2e-15
Identities = 161/230 (70%), Gaps = 2/230 (1%)
Strand=Plus/Minus
Query 33521 CACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGG 33580
|||| || ||||| | ||| |||||||| | || || ||||| ||||||||||| |
Sbjct 129672 CACCTCCCCTCAATCTTAAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAG 129613
Query 33581 AGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCG 33640
| | || || | || |||||||||||||| |||||||| | ||| || || || | |
Sbjct 129612 ACAAAGTACGGCCATCTTCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTG 129553
Query 33641 GCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCC 33699
| | |||||||| || ||||| || | |||| || | || ||| | |||
Sbjct 129552 GAATTCCTTCTTTATCTTGGATTTT-TGCCTTCACATTTTCGATTGTATCGGACGGTTCG 129494
Query 33700 ACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749
|| || | ||||| || ||||| ||||| || || || || || |||||
Sbjct 129493 ACCTCTAAAGTGATGGTCTTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 328688023752960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |