Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05] 3,988 sequences; 353,562,607 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq218 116 4e-21 seq428 95.1 1e-14 >seq218 Length=661058 Score = 116 bits (128), Expect = 4e-21 Identities = 151/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | || ||||||||||| || || ||| | |||||| |||||| Sbjct 356472 ACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACCATCTTCC 356531 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 || ||||| || | | |||||| | ||| |||||||| || ||||||||||| || | Sbjct 356532 AGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGA 356591 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 |||||| ||| | | || | ||||| | || || ||||| | || | ||||||| Sbjct 356592 ATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACTTCTAAAGTGATCGTTTTA 356651 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || || || | |||||| ||||| Sbjct 356652 CCAGTGAGGGTCTTCACGAAAATTTGCAT 356680 Score = 113 bits (124), Expect = 4e-20 Identities = 154/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||||||| ||||| | | || ||||||||||| |||||||| | ||| || | Sbjct 356238 CGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCA 356297 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | ||| || || | | | |||||||| ||||| |||||||| || ||||| || Sbjct 356298 TCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTG 356357 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| ||| | | ||| | ||||| | ||||| ||||| | || | Sbjct 356358 TCTTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATG 356417 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || || ||||| ||||| |||| || |||||||| Sbjct 356418 GTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452 Score = 100 bits (110), Expect = 3e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970 ||| |||||||||| | || || || ||||| || || || | ||| || ||| Sbjct 356012 CAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAAAGGGTTCGTCCATC 356071 Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030 ||| | |||||| |||| | | || ||||| ||||||||||| || || ||||| || || Sbjct 356072 TTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCCTTGTC 356131 Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090 |||||| ||| | | ||| | ||||| | ||||| ||||| | || | || Sbjct 356132 TTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACTTCAAGGGTTATAGT 356191 Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||| | ||||| | ||| || ||||| Sbjct 356192 TTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224 Score = 84.2 bits (92), Expect = 2e-11 Identities = 150/219 (68%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 || ||||||||||| | | | |||||| ||||||||||| || || || | | Sbjct 352166 CGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCA 352225 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| | |||||||||| | | || | ||| || || |||||||| || |||||||| Sbjct 352226 TCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTG 352285 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || || || |||| | ||| | || || | || || ||||| | || | Sbjct 352286 TCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATG 352345 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127 ||||| ||||| | ||||| | ||||| |||||| || Sbjct 352346 GTTTTTCCAGTTAACGTTTTAACAAAAATTTGCATGCCT 352384 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968 |||||||| ||||| | | | || ||||| || |||||||| || || || | | Sbjct 356694 CGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAATGTCCTACCA 356753 Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028 ||||| ||||| || || | | | |||| | ||||| ||||| || || || |||||| Sbjct 356754 TCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGGAATACCCTCTTTA 356813 Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088 || |||||| || | | || | || || | ||| || || || | || | Sbjct 356814 TCTTGAATTTTAGCCTTTACGTTCTCTATTGTGTCAGACGGTTCTACCTCAAGGGTGATT 356873 Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||||||||| || || || | ||||||||||| Sbjct 356874 GTTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908 >seq428 Length=160056 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971 || |||||||| | | || || ||||| |||||||| || || ||||| |||| Sbjct 129655 AAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCATCT 129596 Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031 || | ||||| || | | | |||||||| ||||| || || || || ||||||||||| Sbjct 129595 TCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTATCT 129536 Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091 |||||| |||| | ||| | ||||||| ||| || || || | || | || Sbjct 129535 TGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGGTC 129476 Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 ||||| || | ||| || | ||| || ||||| Sbjct 129475 TTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476587440931680