Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Agrilus_20planipennis_20[refseq_20GCF_5F000699045.1_202016-04-05]
3,988 sequences; 353,562,607 total letters
Query= NC_025960.1
Length=148981
Score E
Sequences producing significant alignments: (Bits) Value
seq218 116 4e-21
seq428 95.1 1e-14
>seq218
Length=661058
Score = 116 bits (128), Expect = 4e-21
Identities = 151/209 (72%), Gaps = 0/209 (0%)
Strand=Plus/Plus
Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974
|||||||| | | || ||||||||||| || || ||| | |||||| ||||||
Sbjct 356472 ACCAAATGGAGAGTGGATTCTTTTTGAATATTATAATCGGAGAGGGTACGACCATCTTCC 356531
Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034
|| ||||| || | | |||||| | ||| |||||||| || ||||||||||| || |
Sbjct 356532 AGTTGTTTTCCTGCAAAGATTAACCTCTGCTGATCTGGTGGAATGCCTTCTTTGTCTTGA 356591
Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094
|||||| ||| | | || | ||||| | || || ||||| | || | |||||||
Sbjct 356592 ATTTTTGCTTTAACATTCTCAATTGTATCTGATGGTTCAACTTCTAAAGTGATCGTTTTA 356651
Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || || || | |||||| |||||
Sbjct 356652 CCAGTGAGGGTCTTCACGAAAATTTGCAT 356680
Score = 113 bits (124), Expect = 4e-20
Identities = 154/215 (72%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||||||| ||||| | | || ||||||||||| |||||||| | ||| || |
Sbjct 356238 CGCAAAACTAAATGCAGAGTCGATTCTTTTTGAATATTGTAGTCAGAAAGGGTGCGACCA 356297
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | ||| || || | | | |||||||| ||||| |||||||| || ||||| ||
Sbjct 356298 TCTTCTAACTGCTTCCCAGCAAAAATTAGACGTTGTTGGTCTGGAGGAATACCTTCCTTG 356357
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| ||| | | ||| | ||||| | ||||| ||||| | || |
Sbjct 356358 TCTTGAATTTTAGCTTTAACGTTTTCAATTGTATCAGATGGCTCAACTTCTAGAGTGATG 356417
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
|| || ||||| ||||| |||| || ||||||||
Sbjct 356418 GTCTTTCCAGTAAGAGTCTTTACAAAGATCTGCAT 356452
Score = 100 bits (110), Expect = 3e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 131911 CAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATC 131970
||| |||||||||| | || || || ||||| || || || | ||| || |||
Sbjct 356012 CAATACCAAATGTAATGTAGATTCCTTCTGAATATTATAATCTGAAAGGGTTCGTCCATC 356071
Query 131971 TTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATC 132030
||| | |||||| |||| | | || ||||| ||||||||||| || || ||||| || ||
Sbjct 356072 TTCCAACTGTTTCCCGGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCCTTGTC 356131
Query 132031 GGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGT 132090
|||||| ||| | | ||| | ||||| | ||||| ||||| | || | ||
Sbjct 356132 TTGAATTTTGGCTTTGACGTTTTCTATTGTATCAGATGGCTCTACTTCAAGGGTTATAGT 356191
Query 132091 TTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||||| | ||||| | ||| || |||||
Sbjct 356192 TTTACCAGTTAATGTTTTGACGAAGATTTGCAT 356224
Score = 84.2 bits (92), Expect = 2e-11
Identities = 150/219 (68%), Gaps = 0/219 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|| ||||||||||| | | | |||||| ||||||||||| || || || | |
Sbjct 352166 CGTAAAACCAAATGGAGGGTACTCTCTTTCTGAATGTTGTAATCAGACAAAGTTCTACCA 352225
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| | |||||||||| | | || | ||| || || |||||||| || ||||||||
Sbjct 352226 TCTTCCAATTGTTTACCGGCAAAAATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTG 352285
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| || || |||| | ||| | || || | || || ||||| | || |
Sbjct 352286 TCCTGGATCTTAGCCTTCACGTTTTCAATTGTGTCTGATGGTTCTACTTCCAGTGTGATG 352345
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCATGACT 132127
||||| ||||| | ||||| | ||||| |||||| ||
Sbjct 352346 GTTTTTCCAGTTAACGTTTTAACAAAAATTTGCATGCCT 352384
Score = 82.4 bits (90), Expect = 7e-11
Identities = 147/215 (68%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 131909 CGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAA 131968
|||||||| ||||| | | | || ||||| || |||||||| || || || | |
Sbjct 356694 CGCAAAACTAAATGAAGGGTGGATTCTTTCTGGATGTTGTAATCAGACAATGTCCTACCA 356753
Query 131969 TCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTA 132028
||||| ||||| || || | | | |||| | ||||| ||||| || || || ||||||
Sbjct 356754 TCTTCAAGCTGCTTGCCAGCAAAAATTAATCTTTGTTGGTCTGGTGGAATACCCTCTTTA 356813
Query 132029 TCGGTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGC 132088
|| |||||| || | | || | || || | ||| || || || | || |
Sbjct 356814 TCTTGAATTTTAGCCTTTACGTTCTCTATTGTGTCAGACGGTTCTACCTCAAGGGTGATT 356873
Query 132089 GTTTTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||||||||| || || || | |||||||||||
Sbjct 356874 GTTTTACCAGTTAGTGTCTTAACAAAAATCTGCAT 356908
>seq428
Length=160056
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 131912 AAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCT 131971
|| |||||||| | | || || ||||| |||||||| || || ||||| ||||
Sbjct 129655 AAGACCAAATGCAATGTCGATTCCTTTTGGATGTTGTAATCAGACAAAGTACGGCCATCT 129596
Query 131972 TCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCG 132031
|| | ||||| || | | | |||||||| ||||| || || || || |||||||||||
Sbjct 129595 TCCAATTGTTTTCCAGCAAAAATTAGACGTTGTTGGTCAGGTGGAATTCCTTCTTTATCT 129536
Query 132032 GTAATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTT 132091
|||||| |||| | ||| | ||||||| ||| || || || | || | ||
Sbjct 129535 TGGATTTTTGCCTTCACATTTTCGATTGTATCGGACGGTTCGACCTCTAAAGTGATGGTC 129476
Query 132092 TTACCAGTCAGAGTTTTTATGAAAATCTGCAT 132123
||||| || | ||| || | ||| || |||||
Sbjct 129475 TTACCCGTTAAAGTCTTCACGAATATTTGCAT 129444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 476587440931680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |